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Jacky Montmain

Publications and source records attributed to Jacky Montmain.

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An Open-Access Multi-modal Dataset for Cognitive, Motor, and Cognitive-Motor Tasks

The incorporation of neuroimaging techniques such as electroenchephalography (EEG) and functional near-infrared spectroscopy (fNIRS) has provided new opportunities for the analysis of dynamic brain processes involved in cognitive and motor functions. Despite the great contribution of the open-access neuroimaging datasets to neuroscience studies, they have mainly remained on a single modality and isolated task paradigms performed in a controlled environments. These limitations restrict the analysis of multi-task effects in real-world applications, thus creating a gap in the understanding of how cognitive and motor processes interact in daily life activities. To address these limitations, we present a multi-modal dataset containing neurophysiological (EEG, fNIRS), physiological (ECG), behavioral, and subjective measures collected from 30 healthy participants over three sessions. This dataset includes a hierarchical series of seven tasks ranging from single cognitive and motor activities, such as N-back, motor, passive motor, mental arithmetic and motor imagery, to combined cognitive-motor interactions simulating real life scenarios. This raw dataset provides a resource for developing advanced preprocessing methods and analysis pipelines, with potential applications in brain-computer interfaces, neurorehabilitation, and other fields requiring an understanding of multi-tasks brain dynamics. https://doi.org/10.18112/openneuro.ds007554.v1.0.0

q-bio.NC

Relevance-Aware Thresholding in Online Conformal Prediction for Time Series

Uncertainty quantification has received considerable interest in recent works in Machine Learning. In particular, Conformal Prediction (CP) gains ground in this field. For the case of time series, Online Conformal Prediction (OCP) becomes an option to address the problem of data distribution shift over time. Indeed, the idea of OCP is to update a threshold of some quantity (whether the miscoverage level or the quantile) based on the distribution observation. To evaluate the performance of OCP methods, two key aspects are typically considered: the coverage validity and the prediction interval width minimization. Recently, new OCP methods have emerged, offering long-run coverage guarantees and producing more informative intervals. However, during the threshold update step, most of these methods focus solely on the validity of the prediction intervals~--~that is, whether the ground truth falls inside or outside the interval~--~without accounting for their relevance. In this paper, we aim to leverage this overlooked aspect. Specifically, we propose enhancing the threshold update step by replacing the binary evaluation (inside/outside) with a broader class of functions that quantify the relevance of the prediction interval using the ground truth. This approach helps prevent abrupt threshold changes, potentially resulting in narrower prediction intervals. Indeed, experimental results on real-world datasets suggest that these functions can produce tighter intervals compared to existing OCP methods while maintaining coverage validity.

cs.LG

How Does a Single EEG Channel Tell Us About Brain States in Brain-Computer Interfaces ?

Over recent decades, neuroimaging tools, particularly electroencephalography (EEG), have revolutionized our understanding of the brain and its functions. EEG is extensively used in traditional brain-computer interface (BCI) systems due to its low cost, non-invasiveness, and high temporal resolution. This makes it invaluable for identifying different brain states relevant to both medical and non-medical applications. Although this practice is widely recognized, current methods are mainly confined to lab or clinical environments because they rely on data from multiple EEG electrodes covering the entire head. Nonetheless, a significant advancement for these applications would be their adaptation for "real-world" use, using portable devices with a single-channel. In this study, we tackle this challenge through two distinct strategies: the first approach involves training models with data from multiple channels and then testing new trials on data from a single channel individually. The second method focuses on training with data from a single channel and then testing the performances of the models on data from all the other channels individually. To efficiently classify cognitive tasks from EEG data, we propose Convolutional Neural Networks (CNNs) with only a few parameters and fast learnable spectral-temporal features. We demonstrated the feasibility of these approaches on EEG data recorded during mental arithmetic and motor imagery tasks from three datasets. We achieved the highest accuracies of 100%, 91.55% and 73.45% in binary and 3-class classification on specific channels across three datasets. This study can contribute to the development of single-channel BCI and provides a robust EEG biomarker for brain states classification.

q-bio.NC

Using Shallow Neural Networks with Functional Connectivity from EEG signals for Early Diagnosis of Alzheimer's and Frontotemporal Dementia

{Introduction: } Dementia is a neurological disorder associated with aging that can cause a loss of cognitive functions, impacting daily life. Alzheimer's disease (AD) is the most common cause of dementia, accounting for 50--70\% of cases, while frontotemporal dementia (FTD) affects social skills and personality. Electroencephalography (EEG) provides an effective tool to study the effects of AD on the brain. {Methods: } In this study, we propose to use shallow neural networks applied to two sets of features: spectral-temporal and functional connectivity using four methods. We compare three supervised machine learning techniques to the CNN models to classify EEG signals of AD / FTD and control cases. We also evaluate different measures of functional connectivity from common EEG frequency bands considering multiple thresholds. {Results and Discussion: } Results showed that the shallow CNN-based models achieved the highest accuracy of 94.54\% with AEC in test dataset when considering all connections, outperforming conventional methods and providing potentially an additional early dementia diagnosis tool. \url{https://doi.org/10.3389%2Ffneur.2023.1270405}

q-bio.NC

Mental arithmetic task classification with convolutional neural network based on spectral-temporal features from EEG

In recent years, neuroscientists have been interested to the development of brain-computer interface (BCI) devices. Patients with motor disorders may benefit from BCIs as a means of communication and for the restoration of motor functions. Electroencephalography (EEG) is one of most used for evaluating the neuronal activity. In many computer vision applications, deep neural networks (DNN) show significant advantages. Towards to ultimate usage of DNN, we present here a shallow neural network that uses mainly two convolutional neural network (CNN) layers, with relatively few parameters and fast to learn spectral-temporal features from EEG. We compared this models to three other neural network models with different depths applied to a mental arithmetic task using eye-closed state adapted for patients suffering from motor disorders and a decline in visual functions. Experimental results showed that the shallow CNN model outperformed all the other models and achieved the highest classification accuracy of 90.68%. It's also more robust to deal with cross-subject classification issues: only 3% standard deviation of accuracy instead of 15.6% from conventional method.

eess.SP

Semantic Similarity from Natural Language and Ontology Analysis

Artificial Intelligence federates numerous scientific fields in the aim of developing machines able to assist human operators performing complex treatments -- most of which demand high cognitive skills (e.g. learning or decision processes). Central to this quest is to give machines the ability to estimate the likeness or similarity between things in the way human beings estimate the similarity between stimuli. In this context, this book focuses on semantic measures: approaches designed for comparing semantic entities such as units of language, e.g. words, sentences, or concepts and instances defined into knowledge bases. The aim of these measures is to assess the similarity or relatedness of such semantic entities by taking into account their semantics, i.e. their meaning -- intuitively, the words tea and coffee, which both refer to stimulating beverage, will be estimated to be more semantically similar than the words toffee (confection) and coffee, despite that the last pair has a higher syntactic similarity. The two state-of-the-art approaches for estimating and quantifying semantic similarities/relatedness of semantic entities are presented in detail: the first one relies on corpora analysis and is based on Natural Language Processing techniques and semantic models while the second is based on more or less formal, computer-readable and workable forms of knowledge such as semantic networks, thesaurus or ontologies. (...) Beyond a simple inventory and categorization of existing measures, the aim of this monograph is to convey novices as well as researchers of these domains towards a better understanding of semantic similarity estimation and more generally semantic measures.

cs.AI

Semantic Measures for the Comparison of Units of Language, Concepts or Instances from Text and Knowledge Base Analysis

Semantic measures are widely used today to estimate the strength of the semantic relationship between elements of various types: units of language (e.g., words, sentences, documents), concepts or even instances semantically characterized (e.g., diseases, genes, geographical locations). Semantic measures play an important role to compare such elements according to semantic proxies: texts and knowledge representations, which support their meaning or describe their nature. Semantic measures are therefore essential for designing intelligent agents which will for example take advantage of semantic analysis to mimic human ability to compare abstract or concrete objects. This paper proposes a comprehensive survey of the broad notion of semantic measure for the comparison of units of language, concepts or instances based on semantic proxy analyses. Semantic measures generalize the well-known notions of semantic similarity, semantic relatedness and semantic distance, which have been extensively studied by various communities over the last decades (e.g., Cognitive Sciences, Linguistics, and Artificial Intelligence to mention a few).

cs.CL

User Centered and Ontology Based Information Retrieval System for Life Sciences

Because of the increasing number of electronic data, designing efficient tools to retrieve and exploit documents is a major challenge. Current search engines suffer from two main drawbacks: there is limited interaction with the list of retrieved documents and no explanation for their adequacy to the query. Users may thus be confused by the selection and have no idea how to adapt their query so that the results match their expectations. This paper describes a request method and an environment based on aggregating models to assess the relevance of documents annotated by concepts of ontology. The selection of documents is then displayed in a semantic map to provide graphical indications that make explicit to what extent they match the user's query; this man/machine interface favors a more interactive exploration of data corpus.

cs.IR