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Jacob Clary

Publications and source records attributed to Jacob Clary.

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Systematic Fine-Tuning of MACE Interatomic Potentials for Catalysis

Once trained, machine-learned interatomic potentials (MLIPs) provide a fast and accurate way to study catalytic reaction pathways, but their performance strongly depends on the training set. Here, we compare nine MLIPs trained with different data sets and strategies, including from-scratch (FS) training and fine-tuning (FT) of large foundation models. The models are evaluated on reaction energies, $E_{r}$, and reaction energy barriers, $E_{a}$, for 141 reactions, including CO$_2$ reduction to C$_2$ and C$_3$ products, propane dehydrogenation, hydrogen intercalation on Pd, and out-of-distribution oxygen evolution reaction (OER) on metal oxides. FS models trained with 5%--10% perturbed high-energy configurations from molecular dynamics or contour exploration reduce the error by more than twofold compared with models trained only on relaxation trajectories. In contrast, FT MLIPs are less sensitive to sampling and transfer well to out-of-distribution reactions. An MLIP fine-tuned on metallic catalysts achieves a 0.30 eV MAE for OER on iridium oxide polymorphs, outperforming out-of-the-box MACE-MH-1 by 0.08 eV and the best FS model by 0.14 eV. A model fine-tuned to O and OH adsorption on metal oxides gives a 0.19 eV reaction-barrier MAE for out-of-distribution CO$_2$RR on Cu, comparable to an FS model trained on in-distribution C--C bond-breaking reactions. Finally, a large MLIP fine-tuned on 49,860 configurations gives the best overall performance across metallic and metal-oxide catalysts and was used to screen a large left-out set of bimetallic alloys, achieving a 0.15 eV MAE for $E_{r}$, even for adsorbates on unseen Miller-index surfaces such as (532). This work identifies the training configurations needed for accurate FS and FT MLIPs for catalytic reaction modeling.

physics.chem-ph

Development of machine-learned interatomic potentials to predict structure, transport, and reactivity in platinum-based fuel cells

Machine-learned interatomic potentials (MLIPs) have rapidly progressed in accuracy, speed, and data efficiency in recent years. However, training robust MLIPs in multicomponent systems still remains a challenge. In this work, we train a MLIP to describe hydrated Nafion ionomers and platinum catalysts, which are important components of fuel cells, by constructing a diverse training set to describe the bulk polymer and interfacial catalyst-polymer interactions well. We find that active learning improves the initial dataset little in terms of reducing uncertainty and error, pointing towards a need for more effective methods to efficiently explore the relevant interactions in complex, multicomponent systems. We use our trained MLIP to study the properties of the platinum-Nafion system, including polymer structure, proton mobility in a bulk Nafion polymer and near a platinum-Nafion interface, and reactions near and far from the interface, finding excellent results for structure and reactions contained within our training set. Transport seems well described, with both vehicular transport and Grotthuss hopping captured, although converged calculations of diffusivities were not computed because they require calculations of tens of nanoseconds that are challenging with current state-of-the-art MLIPs. The combined insights that this model provides can be leveraged to optimize fuel cell performance, and the approach can be applied to other chemical processes and devices where structure, transport, and reactivity all contribute to overall observed performance.

physics.chem-ph

BEAST DB: Grand-Canonical Database of Electrocatalyst Properties

We present BEAST DB, an open-source database comprised of ab initio electrochemical data computed using grand-canonical density functional theory in implicit solvent at consistent calculation parameters. The database contains over 20,000 surface calculations and covers a broad set of heterogeneous catalyst materials and electrochemical reactions. Calculations were performed at self-consistent fixed potential as well as constant charge to facilitate comparisons to the computational hydrogen electrode. This article presents common use cases of the database to rationalize trends in catalyst activity, screen catalyst material spaces, understand elementary mechanistic steps, analyze electronic structure, and train machine learning models to predict higher fidelity properties. Users can interact graphically with the database by querying for individual calculations to gain granular understanding of reaction steps or by querying for an entire reaction pathway on a given material using an interactive reaction pathway tool. BEAST DB will be periodically updated, with planned future updates to include advanced electronic structure data, surface speciation studies, and greater reaction coverage.

cond-mat.mtrl-sci