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Jacob Knight

Publications and source records attributed to Jacob Knight.

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Partial Entropy production of active particles with hidden states in potentials

Partially observed stochastic systems can appear (almost) time-reversal symmetric while in fact operating far from equilibrium. The present work extends the perturbative framework introduced in [Phys. Rev. Lett. 136, 198302 (2026)] to calculate in a generic confining potential the partial entropy production, which quantifies the time-reversal asymmetry of a generic active particle with hidden self-propulsion. Focusing on the harmonic case, we apply our framework to reproduce an exact result for the partial entropy production rate of an active Ornstein-Uhlenbeck particle and to derive the partial entropy production rate of a run-and-tumble particle.

cond-mat.stat-mech

Conditional splitting probabilities for hidden-state inference in drift-diffusive processes

Splitting probabilities quantify the likelihood of particular outcomes out of a set of mutually-exclusive possibilities for stochastic processes and play a central role in first-passage problems. For two-dimensional Markov processes $\{X(t),Y(t)\}_{t\in T}$, a joint analogue of the splitting probabilities can be defined, which captures the likelihood that the variable $X(t)$, having been initialised at $x_0 \in \mathbb{L}$, exits $\mathbb{L}$ for the first time via either of the interval boundaries \emph{and} that the variable $Y(t)$, initialised at $y_0$, is given by $y_{\rm exit}$ at the time of exit. We compute such joint splitting probabilities for two classes of processes: processes where $X(t)$ is Brownian motion and $Y(t)$ is a decoupled internal state, and unidirectionally coupled processes where $X(t)$ is drift-diffusive and depends on $Y(t)$, while $Y(t)$ evolves independently. For the first class we obtain generic expressions in terms of the eigensystem of the Fokker-Planck operator for the $Y$ dynamics, while for the second we carry out explicit derivations for three paradigmatic cases (run-and-tumble motion, diffusion in an intermittent piecewise-linear potential and diffusion with stochastic resetting). Drawing on Bayes' theorem, we subsequently introduce the related notion of conditional splitting probabilities, defined as the posterior likelihoods of the internal state $Y$ \emph{given} that the observable degree of freedom $X$ has undergone a specific exit event. After computing these conditional splitting probabilities, we propose a simple scheme that leverages them to partially infer the assumedly hidden state $Y(t)$ from point-wise detection events.

math-ph

Self-propulsion symmetries determine entropy production of active particles with hidden states

Entropy production distinguishes equilibrium from non-equilibrium. Calculating the entropy production rate (EPR) is challenging in systems where some degrees of freedom cannot be observed. Here we introduce a perturbative framework to calculate the ``partial EPR'' of a canonical hidden-state system, a generic self-propelled active particle with hidden self-propulsion. We find that the parity symmetry, P, and (time-)reversibility, T, of the hidden variable determine partial entropy production. Non-trivial entropy production appears at least at sixth order in the self-propulsion velocity. We apply our framework to two processes which break P- and T-symmetries respectively: an asymmetric telegraph process and diffusion with stochastic resetting.

cond-mat.stat-mech

Memoryless Chemotaxis with Discrete Cues

A wide array of biological systems can navigate in shallow gradients of chemoattractant with remarkable precision. Whilst previous approaches model such systems using coarse-grained chemical density profiles, we construct a dynamical model consisting of a chemotactic cell responding to discrete cue particles. For a cell without internal memory, we derive an effective velocity with which the cell approaches a point source of cue particles. We find that the effective velocity becomes negative beyond some homing radius, which represents an upper bound on the distance within which chemotaxis can be reliably performed. This work lays the foundation for the analytical characterisation of more detailed models of chemotaxis.

physics.bio-ph

Optimal power extraction from active particles with hidden states

We identify generic protocols achieving optimal power extraction from a single active particle subject to continuous feedback control under the assumption that its spatial trajectory, but not its instantaneous self-propulsion force, is accessible to direct observation. Our Bayesian approach draws on the Onsager-Machlup path integral formalism and is exemplified in the cases of free run-and-tumble and active Ornstein-Uhlenbeck dynamics in one dimension. Such optimal protocols extract positive work even in models characterised by time-symmetric positional trajectories and thus vanishing informational entropy production rates. We argue that the theoretical bounds derived in this work are those against which the performance of realistic active matter engines should be compared.

cond-mat.stat-mech