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Jai Doshi

Publications and source records attributed to Jai Doshi.

2 recordsLinked to original sources

MEMIG: Self-evolving Memory Construction for Antibody Optimization

Memory has become central to self-evolving LLM agents, which store and retrieve experience from past rollouts to guide future decisions. Existing systems represent this experience as free-form natural language and maintain it by rewriting, which fits tasks whose experience is narratable. However, in scientific discovery and optimization, experience is often a quantity measured by an oracle under a specific context. Rewriting it as text leaves no index for where a record should be, replaces a measurement with a description, and cannot express how interventions interact. To address this, we argue that agent memory for biomolecule optimization should instead be indexable, quantitative, and structured, and we introduce MEMIG. This memory construction framework realizes these three properties. In detail, MEMIG addresses each insight with a domain-grounded identifier and accumulates the quantitative effect measured by a property oracle, so that updates remain local and retrieval becomes an exact lookup. Next, MEMIG connects insights whose interventions are applied together and measures their epistasis by decomposing each evaluated set. Our results show that MEMIG improves performance in most settings across in silico antibody optimization tasks.

cs.AI↗

Does Unlearning Truly Unlearn? A Black Box Evaluation of LLM Unlearning Methods

Large language model unlearning aims to remove harmful information that LLMs have learnt to prevent their use for malicious purposes. LLMU and RMU have been proposed as two methods for LLM unlearning, achieving impressive results on unlearning benchmarks. We study in detail the impact of unlearning on LLM performance metrics using the WMDP dataset as well as a new biology dataset we create. We show that unlearning has a notable impact on general model capabilities, with the performance degradation being more significant in general for LLMU. We further test the robustness of the two methods and find that doing 5-shot prompting or rephrasing the question in simple ways can lead to an over ten-fold increase in accuracy on unlearning benchmarks. Finally, we show that training on unrelated data can almost completely recover pre-unlearning performance, demonstrating that these methods fail at truly unlearning. Our methodology serves as an evaluation framework for LLM unlearning methods. The code is available at: https://github.com/JaiDoshi/Knowledge-Erasure.

cs.CL↗