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James M. Robins

Publications and source records attributed to James M. Robins.

At least 55 records · Page 3Linked to original sources
arXiv2019

Generalizing causal inferences from randomized trials: counterfactual and graphical identification

When engagement with a randomized trial is driven by factors that affect the outcome or when trial engagement directly affects the outcome independent of treatment, the average treatment effect among trial participants is unlikely to generalize to a target population. In this paper, we use counterfactual and graphical causal models to examine under what conditions we can generalize causal inferences from a randomized trial to the target population of trial-eligible individuals. We offer an interpretation of generalizability analyses using the notion of a hypothetical intervention to "scale-up" trial engagement to the target population. We consider the interpretation of generalizability analyses when trial engagement does or does not directly affect the outcome, highlight connections with censoring in longitudinal studies, and discuss identification of the distribution of counterfactual outcomes via g-formula computation and inverse probability weighting. Last, we show how the methods can be extended to address time-varying treatments, non-adherence, and censoring.

stat.ME↗
arXiv2019

A unifying approach for doubly-robust $\ell_1$ regularized estimation of causal contrasts

We consider inference about a scalar parameter under a non-parametric model based on a one-step estimator computed as a plug in estimator plus the empirical mean of an estimator of the parameter's influence function. We focus on a class of parameters that have influence function which depends on two infinite dimensional nuisance functions and such that the bias of the one-step estimator of the parameter of interest is the expectation of the product of the estimation errors of the two nuisance functions. Our class includes many important treatment effect contrasts of interest in causal inference and econometrics, such as ATE, ATT, an integrated causal contrast with a continuous treatment, and the mean of an outcome missing not at random. We propose estimators of the target parameter that entertain approximately sparse regression models for the nuisance functions allowing for the number of potential confounders to be even larger than the sample size. By employing sample splitting, cross-fitting and $\ell_1$-regularized regression estimators of the nuisance functions based on objective functions whose directional derivatives agree with those of the parameter's influence function, we obtain estimators of the target parameter with two desirable robustness properties: (1) they are rate doubly-robust in that they are root-n consistent and asymptotically normal when both nuisance functions follow approximately sparse models, even if one function has a very non-sparse regression coefficient, so long as the other has a sufficiently sparse regression coefficient, and (2) they are model doubly-robust in that they are root-n consistent and asymptotically normal even if one of the nuisance functions does not follow an approximately sparse model so long as the other nuisance function follows an approximately sparse model with a sufficiently sparse regression coefficient.

math.ST↗
arXiv2019

Sensitivity analysis using bias functions for studies extending inferences from a randomized trial to a target population

Extending (generalizing or transporting) causal inferences from a randomized trial to a target population requires ``generalizability'' or ``transportability'' assumptions, which state that randomized and non-randomized individuals are exchangeable conditional on baseline covariates. These assumptions are made on the basis of background knowledge, which is often uncertain or controversial, and need to be subjected to sensitivity analysis. We present simple methods for sensitivity analyses that do not require detailed background knowledge about specific unknown or unmeasured determinants of the outcome or modifiers of the treatment effect. Instead, our methods directly parameterize violations of the assumptions using bias functions. We show how the methods can be applied to non-nested trial designs, where the trial data are combined with a separately obtained sample of non-randomized individuals, as well as to nested trial designs, where a clinical trial is embedded within a cohort sampled from the target population. We illustrate the methods using data from a clinical trial comparing treatments for chronic hepatitis C infection.

stat.ME↗
arXiv2019

Study designs for extending causal inferences from a randomized trial to a target population

We examine study designs for extending (generalizing or transporting) causal inferences from a randomized trial to a target population. Specifically, we consider nested trial designs, where randomized individuals are nested within a sample from the target population, and non-nested trial designs, including composite dataset designs, where a randomized trial is combined with a separately obtained sample of non-randomized individuals from the target population. We show that the causal quantities that can be identified in each study design depend on what is known about the probability of sampling non-randomized individuals. For each study design, we examine identification of potential outcome means via the g-formula and inverse probability weighting. Last, we explore the implications of the sampling properties underlying the designs for the identification and estimation of the probability of trial participation.

stat.ME↗
arXiv2019

Characterization of parameters with a mixed bias property

In this article we study a class of parameters with the so-called `mixed bias property'. For parameters with this property, the bias of the semiparametric efficient one step estimator is equal to the mean of the product of the estimation errors of two nuisance functions. In non-parametric models, parameters with the mixed bias property admit so-called rate doubly robust estimators, i.e. estimators that are consistent and asymptotically normal when one succeeds in estimating both nuisance functions at sufficiently fast rates, with the possibility of trading off slower rates of convergence for the estimator of one of the nuisance functions with faster rates for the estimator of the other nuisance. We show that the class of parameters with the mixed bias property strictly includes two recently studied classes of parameters which, in turn, include many parameters of interest in causal inference. We characterize the form of parameters with the mixed bias property and of their influence functions. Furthermore, we derive two functional moment equations, each being solved at one of the two nuisance functions, as well as, two functional loss functions, each being minimized at one of the two nuisance functions. These loss functions can be used to derive loss based penalized estimators of the nuisance functions.

math.ST↗
arXiv2016

On falsification of the binary instrumental variable model

Instrumental variables are widely used for estimating causal effects in the presence of unmeasured confounding. The discrete instrumental variable model has testable implications on the law of the observed data. However, current assessments of instrumental validity are typically based solely on subject-matter arguments rather than these testable implications, partly due to a lack of formal statistical tests with known properties. In this paper, we develop simple procedures for testing the binary instrumental variable model. Our methods are based on existing approaches for comparing two treatments, such as the t-test and the Gail--Simon test. We illustrate the importance of testing the instrumental variable model by evaluating the exogeneity of college proximity using the National Longitudinal Survey of Young Men.

stat.ME↗
arXiv2016

On Modeling and Estimation for the Relative Risk and Risk Difference

A common problem in formulating models for the relative risk and risk difference is the variation dependence between these parameters and the baseline risk, which is a nuisance model. We address this problem by proposing the conditional log odds-product as a preferred nuisance model. This novel nuisance model facilitates maximum-likelihood estimation, but also permits doubly-robust estimation for the parameters of interest. Our approach is illustrated via simulations and a data analysis.

stat.ME↗
arXiv2015

Influence Functions for Machine Learning: Nonparametric Estimators for Entropies, Divergences and Mutual Informations

We propose and analyze estimators for statistical functionals of one or more distributions under nonparametric assumptions. Our estimators are based on the theory of influence functions, which appear in the semiparametric statistics literature. We show that estimators based either on data-splitting or a leave-one-out technique enjoy fast rates of convergence and other favorable theoretical properties. We apply this framework to derive estimators for several popular information theoretic quantities, and via empirical evaluation, show the advantage of this approach over existing estimators.

stat.ML↗
arXiv2013

Sparse Nested Markov models with Log-linear Parameters

Hidden variables are ubiquitous in practical data analysis, and therefore modeling marginal densities and doing inference with the resulting models is an important problem in statistics, machine learning, and causal inference. Recently, a new type of graphical model, called the nested Markov model, was developed which captures equality constraints found in marginals of directed acyclic graph (DAG) models. Some of these constraints, such as the so called `Verma constraint', strictly generalize conditional independence. To make modeling and inference with nested Markov models practical, it is necessary to limit the number of parameters in the model, while still correctly capturing the constraints in the marginal of a DAG model. Placing such limits is similar in spirit to sparsity methods for undirected graphical models, and regression models. In this paper, we give a log-linear parameterization which allows sparse modeling with nested Markov models. We illustrate the advantages of this parameterization with a simulation study.

cs.LG↗
arXiv2013

Probabilistic Evaluation of Sequential Plans from Causal Models with Hidden Variables

The paper concerns the probabilistic evaluation of plans in the presence of unmeasured variables, each plan consisting of several concurrent or sequential actions. We establish a graphical criterion for recognizing when the effects of a given plan can be predicted from passive observations on measured variables only. When the criterion is satisfied, a closed-form expression is provided for the probability that the plan will achieve a specified goal.

cs.AI↗
arXiv2013

Estimation of Effects of Sequential Treatments by Reparameterizing Directed Acyclic Graphs

The standard way to parameterize the distributions represented by a directed acyclic graph is to insert a parametric family for the conditional distribution of each random variable given its parents. We show that when one's goal is to test for or estimate an effect of a sequentially applied treatment, this natural parameterization has serious deficiencies. By reparameterizing the graph using structural nested models, these deficiencies can be avoided.

stat.ME↗
arXiv2012

Parameter and Structure Learning in Nested Markov Models

The constraints arising from DAG models with latent variables can be naturally represented by means of acyclic directed mixed graphs (ADMGs). Such graphs contain directed and bidirected arrows, and contain no directed cycles. DAGs with latent variables imply independence constraints in the distribution resulting from a 'fixing' operation, in which a joint distribution is divided by a conditional. This operation generalizes marginalizing and conditioning. Some of these constraints correspond to identifiable 'dormant' independence constraints, with the well known 'Verma constraint' as one example. Recently, models defined by a set of the constraints arising after fixing from a DAG with latents, were characterized via a recursive factorization and a nested Markov property. In addition, a parameterization was given in the discrete case. In this paper we use this parameterization to describe a parameter fitting algorithm, and a search and score structure learning algorithm for these nested Markov models. We apply our algorithms to a variety of datasets.

stat.ML↗
arXiv2012

On the Validity of Covariate Adjustment for Estimating Causal Effects

Identifying effects of actions (treatments) on outcome variables from observational data and causal assumptions is a fundamental problem in causal inference. This identification is made difficult by the presence of confounders which can be related to both treatment and outcome variables. Confounders are often handled, both in theory and in practice, by adjusting for covariates, in other words considering outcomes conditioned on treatment and covariate values, weighed by probability of observing those covariate values. In this paper, we give a complete graphical criterion for covariate adjustment, which we term the adjustment criterion, and derive some interesting corollaries of the completeness of this criterion.

stat.ME↗
arXiv2012

An Efficient Algorithm for Computing Interventional Distributions in Latent Variable Causal Models

Probabilistic inference in graphical models is the task of computing marginal and conditional densities of interest from a factorized representation of a joint probability distribution. Inference algorithms such as variable elimination and belief propagation take advantage of constraints embedded in this factorization to compute such densities efficiently. In this paper, we propose an algorithm which computes interventional distributions in latent variable causal models represented by acyclic directed mixed graphs(ADMGs). To compute these distributions efficiently, we take advantage of a recursive factorization which generalizes the usual Markov factorization for DAGs and the more recent factorization for ADMGs. Our algorithm can be viewed as a generalization of variable elimination to the mixed graph case. We show our algorithm is exponential in the mixed graph generalization of treewidth.

cs.LG↗
arXiv2009

Minimal sufficient causation and directed acyclic graphs

Notions of minimal sufficient causation are incorporated within the directed acyclic graph causal framework. Doing so allows for the graphical representation of sufficient causes and minimal sufficient causes on causal directed acyclic graphs while maintaining all of the properties of causal directed acyclic graphs. This in turn provides a clear theoretical link between two major conceptualizations of causality: one counterfactual-based and the other based on a more mechanistic understanding of causation. The theory developed can be used to draw conclusions about the sign of the conditional covariances among variables.

math.ST↗
arXiv2008

Generation interval contraction and epidemic data analysis

The generation interval is the time between the infection time of an infected person and the infection time of his or her infector. Probability density functions for generation intervals have been an important input for epidemic models and epidemic data analysis. In this paper, we specify a general stochastic SIR epidemic model and prove that the mean generation interval decreases when susceptible persons are at risk of infectious contact from multiple sources. The intuition behind this is that when a susceptible person has multiple potential infectors, there is a ``race'' to infect him or her in which only the first infectious contact leads to infection. In an epidemic, the mean generation interval contracts as the prevalence of infection increases. We call this global competition among potential infectors. When there is rapid transmission within clusters of contacts, generation interval contraction can be caused by a high local prevalence of infection even when the global prevalence is low. We call this local competition among potential infectors. Using simulations, we illustrate both types of competition. Finally, we show that hazards of infectious contact can be used instead of generation intervals to estimate the time course of the effective reproductive number in an epidemic. This approach leads naturally to partial likelihoods for epidemic data that are very similar to those that arise in survival analysis, opening a promising avenue of methodological research in infectious disease epidemiology.

q-bio.QM↗