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James S. Bolton

Publications and source records attributed to James S. Bolton.

At least 37 records · Page 2Linked to original sources
arXiv2025

Galaxy Formation and Symbiotic Evolution with the Inter-Galactic Medium in the Age of ELT-ANDES

High-resolution absorption spectroscopy toward bright background sources has had a paramount role in understanding early galaxy formation, the evolution of the intergalactic medium and the reionisation of the Universe. However, these studies are now approaching the boundaries of what can be achieved at ground-based 8-10m class telescopes. The identification of primeval systems at the highest redshifts, within the reionisation epoch and even into the dark ages, and of the products of the first generation of stars and the chemical enrichment of the early Universe, requires observing very faint targets with a signal-to-noise ratio high enough to detect very faint spectral signatures. In this paper, we describe the giant leap forward that will be enabled by ANDES, the high-resolution spectrograph for the ELT, in these key science fields, together with a brief, non-exhaustive overview of other extragalactic research topics that will be pursued by this instrument, and its synergistic use with other facilities that will become available in the early 2030s.

astro-ph.GA↗
arXiv2025

Prospects of a statistical detection of the 21-cm forest and its potential to constrain the thermal state of the neutral IGM during reionization

The 21-cm forest signal is a promising probe of the Epoch of Reionization complementary to other 21-cm line observables and Ly$α$ forest signal. Prospects of detecting it have significantly improved in the last decade thanks to the discovery of more than 30 radio-loud quasars at these redshifts, upgrades to telescope facilities, and the notion that neutral hydrogen islands persist down to $z\lesssim 5.5$. We forward-model the 21-cm forest signal using semi-numerical simulations and incorporate various instrumental features to explore the potential of detecting the 21-cm forest at $z=6$, both directly and statistically, with the currently available (uGMRT) and forthcoming (SKA1-low) observatories. We show that it is possible to detect the 1D power spectrum of the 21-cm forest spectrum, especially at large scales of $k\lesssim8.5\,\rm MHz^{-1}$ with the $500\,\rm hr$ of the uGMRT time and $k\lesssim32.4\,\rm MHz^{-1}$ with the SKA1-low over $50\,\rm hr$ if the intergalactic medium (IGM) is $25\%$ neutral and these neutral hydrogen regions have a spin temperature of $\lesssim30\,\rm K$. On the other hand, we infer that a null-detection of the signal with such observations of 10 radio-loud sources at $z\approx6$ can be translated into constraints on the thermal and ionization state of the IGM which are tighter than the currently available measurements. Moreover, a null-detection of the 1D 21-cm forest power spectrum with only $50\,\rm hr$ of the uGMRT observations of 10 radio-loud sources can already be competitive with the Ly$α$ forest and 21-cm tomographic observations in disfavouring models of significantly neutral and cold IGM at $z=6$.

astro-ph.CO↗
arXiv2024

The ionizing photon budget and effective clumping factor in radiative transfer simulations calibrated to Lyman-alpha forest data

Recent JWST observations have allowed for the first time to obtain comprehensive measurements of the ionizing photon production efficiency $ξ_\text{ion} $ for a wide range of reionization-epoch galaxies. We explore implications for the inferred UV luminosity functions and escape fractions of ionizing sources in our suite of simulations. These are run with the GPU-based radiative transfer code ATON-HE and are calibrated to the XQR-30 Lyman-alpha forest data at $5 50$% at $z> 10$, disfavouring the oligarchic source model at very high redshift. The inferred effective clumping factors in our simulations are in the range of $3-6$, suggesting consistency between the observed ionizing properties of reionization-epoch galaxies and the ionizing photon budget in our simulations.

astro-ph.CO↗
arXiv2024

Late-end reionization with ATON-HE: towards constraints from Lyman-$α$ emitters observed with JWST

We present a new suite of late-end reionization simulations performed with ATON-HE, a revised version of the GPU-based radiative transfer code ATON that includes helium. The simulations are able to reproduce the Ly$α$ flux distribution of the E-XQR-30 sample of QSO absorption spectra at $5 \lesssim z \lesssim 6.2$, and show that a large variety of reionization models are consistent with these data. We explore a range of variations in source models and in the early-stage evolution of reionization. Our fiducial reionization history has a midpoint of reionization at $z = 6.5$, but we also explore an `Early' reionization history with a midpoint at $z = 7.5$ and an `Extremely Early' reionization history with a midpoint at $z = 9.5$. Haloes massive enough to host observed Ly$α$ emitters are highly biased. The fraction of such haloes embedded in ionized bubbles that are large enough to allow high Ly$α$ transmission becomes close to unity much before the volume filling factor of ionized regions. For our fiducial reionization history this happens at $z = 8$, probably too late to be consistent with the detection by JWST of abundant Ly$α$ emission out to $z = 11$. A reionization history in our `Early' model or perhaps even our `Extremely Early' model may be required, suggesting a Thomson scattering optical depth in tension with that reported by Planck, but consistent with recent suggestions of a significantly higher value.

astro-ph.CO↗
arXiv2024

Damping Wing-Like Features in the Stacked Ly$α$ Forest: Potential Neutral Hydrogen Islands at $z<6$

Recent quasar absorption line observations suggest that reionization may end as late as $z \approx 5.3$. As a means to search for large neutral hydrogen islands at $z<6$, we revisit long dark gaps in the Ly$β$ forest in VLT/X-Shooter and Keck/ESI quasar spectra. We stack the Ly$α$ forest corresponding to both edges of these Ly$β$ dark gaps and identify a damping wing-like extended absorption profile. The average redshift of the stacked forest is $z=5.8$. By comparing these observations with reionization simulations, we infer that such a damping wing-like feature can be naturally explained if these gaps are at least partially created by neutral islands. Conversely, simulated dark gaps lacking neutral hydrogen struggle to replicate the observed damping wing features. Furthermore, this damping wing-like profile implies that the volume-averaged neutral hydrogen fraction must be $\langle x_{\rm HI} \rangle \geq 6.1 \pm 3.9\%$ at $z = 5.8$. Our results offer robust evidence that reionization extends below $z=6$.

astro-ph.CO↗
arXiv2024

Damping wing absorption associated with a giant Ly$α$ trough at $z < 6$: direct evidence for late-ending reionization

Multiple observations now suggest that the hydrogen reionization may have ended well below redshift six. While there has previously been no conclusive proof of extended neutral islands in the $z < 6$ intergalactic medium, it is possible that such islands give rise to the giant Ly$α$ absorption troughs seen in the spectra of high-redshift quasars. Here we present evidence that the deepest and longest-known Ly$α$ trough at $z < 6$, towards ULAS J0148+0600 (J0148), is associated with damping wing absorption. The evidence comes from a window of strong Ly$α$ transmission at the edge of the J0148 proximity zone. We show that the relatively smooth profile of this transmission window is highly unlikely to arise from resonant absorption alone, but is consistent with the presence of a damping wing. We further argue that the damping wing is unlikely to arise from a compact source due to the lack of associated metal lines, and is more likely to arise from an extended neutral island associated with the giant Ly$α$ trough. We investigate the physical conditions that may give rise to the strong transmission window, and speculate that it may signal an usually deep void, nearby ionizing sources, and/or the recent passage of an ionization front.

astro-ph.CO↗
arXiv2024

Deep Learning the Intergalactic Medium using Lyman-alpha Forest at $ 4 \leq z \leq 5$

Unveiling the thermal history of the intergalactic medium (IGM) at $4 \leq z \leq 5$ holds the potential to reveal early onset HeII reionization or lingering thermal fluctuations from HI reionization. We set out to reconstruct the IGM gas properties along simulated Lyman-alpha forest data on pixel-by-pixel basis, employing deep Bayesian neural networks. Our approach leverages the Sherwood-Relics simulation suite, consisting of diverse thermal histories, to generate mock spectra. Our convolutional and residual networks with likelihood metric predicts the Ly$α$ optical depth-weighted density or temperature for each pixel in the Ly$α$ forest skewer. We find that our network can successfully reproduce IGM conditions with high fidelity across range of instrumental signal-to-noise. These predictions are subsequently translated into the temperature-density plane, facilitating the derivation of reliable constraints on thermal parameters. This allows us to estimate temperature at mean cosmic density, $T_{\rm 0}$ with one sigma confidence $δT_{\rm 0} \sim 1000{\rm K}$ using only one $20$Mpc/h sightline ($Δz\simeq 0.04$) with a typical reionization history. Existing studies utilize redshift pathlength comparable to $Δz\simeq 4$ for similar constraints. We can also provide more stringent constraints on the slope ($1σ$ confidence interval $δ{\rm γ} \lesssim 0.1$) of the IGM temperature-density relation as compared to other traditional approaches. We test the reconstruction on a single high signal-to-noise observed spectrum ($20$ Mpc/h segment), and recover thermal parameters consistent with current measurements. This machine learning approach has the potential to provide accurate yet robust measurements of IGM thermal history at the redshifts in question.

astro-ph.CO↗
arXiv2024

Particle initialization effects on Lyman-$α$ forest statistics in cosmological SPH simulations

Confronting measurements of the Lyman-$α$ forest with cosmological hydrodynamical simulations has produced stringent constraints on models of particle dark matter and the thermal and ionization state of the intergalactic medium. We investigate the robustness of such models of the Lyman-$α$ forest, focussing on the effect of particle initial conditions on the Lyman-$α$ forest statistics in cosmological SPH simulations. We study multiple particle initialization algorithms in simulations that are designed to be identical in other respects. In agreement with the literature, we find that the correct linear theory evolution is obtained when a glass-like configuration is used for initial unperturbed gas particle positions alongside a regular grid configuration for dark matter particles and the use of non-identical initial density perturbations for gas and dark matter. However, we report that this introduces a large scale-dependent distortion in the one-dimensional Lyman-$α$ transmission power spectrum at small scales ($k > 0.05$ s/km). The effect is close to $50\%$ at $k\sim 0.1$ s/km, and persists at higher resolution. This can severely bias inferences in parameters such as the dark matter particle mass. By considering multiple initial conditions codes and their variations, we also study the impact of a variety of other assumptions and algorithmic choices, such as adaptive softening, background radiation density, particle staggering, and perturbation theory accuracy, on the matter power spectrum, the Lyman-$α$ flux power spectrum, and the Lyman-$α$ flux PDF. This work reveals possible pathways towards more accurate theoretical models of the Lyman-$α$ forest to match the quality of upcoming measurements.

astro-ph.CO↗
arXiv2024

Unveiling Dark Matter free-streaming at the smallest scales with high redshift Lyman-alpha forest

This study introduces novel constraints on the free-streaming of thermal relic warm dark matter (WDM) from Lyman-$α$ forest flux power spectra. Our analysis utilises a high-resolution, high-redshift sample of quasar spectra observed using the HIRES and UVES spectrographs ($z=4.2-5.0$). We employ a Bayesian inference framework and a simulation-based likelihood that encompasses various parameters including the free-streaming of dark matter, cosmological parameters, the thermal history of the intergalactic medium, and inhomogeneous reionization, to establish lower limits on the mass of a thermal relic WDM particle of $5.7\;\mathrm{keV}$ (at 95\% C.L.). This result surpasses previous limits from the Lyman-$α$ forest through reduction of the measured uncertainties due to a larger statistical sample and by measuring clustering to smaller scales ($k_{\rm max}=0.2\;\mathrm{km^{-1}\,s}$). The approximately two-fold improvement due to the expanded statistical sample suggests that the effectiveness of Lyman-$α$ forest constraints on WDM models at high redshifts are limited by the availability of high-quality quasar spectra. Restricting the analysis to comparable scales and thermal history priors as in prior studies ($k_{\rm max}<0.1\;\mathrm{km^{-1}\,s}$) lowers the bound on the WDM mass to $4.1\;\mathrm{keV}$. As the precision of the measurements increases, it becomes crucial to examine the instrumental and modelling systematics. On the modelling front, we argue that the impact of the thermal history uncertainty on the WDM particle mass constraint has diminished due to improved independent observations. At the smallest scales, the primary source of modeling systematic arises from the structure in the peculiar velocity of the intergalactic medium and inhomogeneous reionization.

astro-ph.CO↗
arXiv2023

Measuring the photo-ionization rate, neutral fraction and mean free path of HI ionizing photons at $4.9 \leq z \leq 6.0$ from a large sample of XShooter and ESI spectra

We measure the mean free path ($λ_{\rm mfp,HI}$), photo-ionization rate ($\langle Γ_{\rm HI} \rangle$) and neutral fraction ($\langle f_{\rm HI} \rangle$) of hydrogen in 12 redshift bins at $4.85<z<6.05$ from a large sample of moderate resolution XShooter and ESI QSO absorption spectra. The fluctuations in ionizing radiation field are modeled by post-processing simulations from the Sherwood suite using our new code "EXtended reionization based on the Code for Ionization and Temperature Evolution" (EX-CITE). EX-CITE uses efficient Octree summation for computing intergalactic medium attenuation and can generate large number of high resolution $Γ_{\rm HI}$ fluctuation models. Our simulation with EX-CITE shows remarkable agreement with simulations performed with the radiative transfer code Aton and can recover the simulated parameters within $1σ$ uncertainty. We measure the three parameters by forward-modeling the Ly$α$ forest and comparing the effective optical depth ($τ_{\rm eff, HI}$) distribution in simulations and observations. The final uncertainties in our measured parameters account for the uncertainties due to thermal parameters, modeling parameters, observational systematics and cosmic variance. Our best fit parameters show significant evolution with redshift such that $λ_{\rm mfp,HI}$ and $\langle f_{\rm HI} \rangle$ decreases and increases by a factor $\sim 6$ and $\sim 10^{4}$, respectively from $z \sim 5$ to $z \sim 6$. By comparing our $λ_{\rm mfp,HI}$, $\langle Γ_{\rm HI} \rangle$ and $\langle f_{\rm HI} \rangle$ evolution with that in state-of-the-art Aton radiative transfer simulations and the Thesan and CoDa-III simulations, we find that our best fit parameter evolution is consistent with a model in which reionization completes by $z \sim 5.2$.

astro-ph.CO↗
arXiv2023

Investigating the characteristic shape and scatter of intergalactic damping wings during reionization

Ly$α$ damping wings in the spectra of bright objects at high redshift are a useful probe of the ionization state of the intergalactic medium during the reionization epoch. It has recently been noted that, despite the inhomogeneous nature of reionization, these damping wings have a characteristic shape which is a strong function of the volume-weighted average neutral hydrogen fraction of the intergalactic medium. We present here a closer examination of this finding using a simulation of patchy reionization from the Sherwood-Relics simulation suite. We show that the characteristic shape and scatter of the damping wings are determined by the average neutral hydrogen density along the line of sight, weighted by its contribution to the optical depth producing the damping wing. We find that there is a redshift dependence in the characteristic shape due to the expansion of the Universe. Finally, we show that it is possible to differentiate between the shapes of damping wings in galaxies and young (or faint) quasars at different points in the reionization history at large velocity offsets from the point where the transmission first reaches zero.

astro-ph.CO↗
arXiv2023

JWST observations of galaxy damping wings during reionization interpreted with cosmological simulations

Spectra of the highest redshift galaxies taken with JWST are now allowing us to see into the heart of the reionization epoch. Many of these observed galaxies exhibit strong damping wing absorption redward of their Lyman-$α$ emission. These observations have been used to measure the redshift evolution of the neutral fraction of the intergalactic medium and sizes of ionized bubbles. However, these estimates have been made using a simple analytic model for the intergalactic damping wing. We explore the recent observations with models of inhomogeneous reionization from the Sherwood-Relics simulation suite. We carry out a comparison between the damping wings calculated from the simulations and from the analytic model. We find that although the agreement is good on the red side of the Lyman-$α$ emission, there is a discrepancy on the blue side due to residual neutral hydrogen present in the simulations, which saturates the intergalactic absorption. For this reason, we find that it is difficult to reproduce the claimed observations of large bubble sizes at z ~ 7, which are driven by a detection of transmitted flux blueward of the Lyman-$α$ emission. We suggest instead that the observations can be explained by a model with smaller ionized bubbles and larger intrinsic Lyman-$α$ emission from the host galaxy.

astro-ph.GA↗
arXiv2023

Possible evidence for a large-scale enhancement in the Lyman-$α$ forest power spectrum at redshift $\mathbf{\textit{z}\geq 4}$

Inhomogeneous reionization enhances the 1D Lyman-$α$ forest power spectrum on large scales at redshifts $z\geq4$. This is due to coherent fluctuations in the ionized hydrogen fraction that arise from large-scale variations in the post-reionization gas temperature, which fade as the gas cools. It is therefore possible to use these relic fluctuations to constrain inhomogeneous reionization with the power spectrum at wavenumbers $\log_{10}(k/{\rm km^{-1}\,s})\lesssim -1.5$. We use the Sherwood-Relics suite of hybrid radiation hydrodynamical simulations to perform a first analysis of new Lyman-$α$ forest power spectrum measurements at $4.0\leq z \leq 4.6$. These data extend to wavenumbers $\log_{10}(k/{\rm km^{-1}\,s})\simeq -3$, with a relative uncertainty of $10$--$20$ per cent in each wavenumber bin. Our analysis returns a $2.7σ$ preference for an enhancement in the Lyman-$α$ forest power spectrum at large scales, in excess of that expected for a spatially uniform ultraviolet background. This large-scale enhancement could be a signature of inhomogeneous reionization, although the statistical precision of these data is not yet sufficient for obtaining a robust detection of the relic post-reionization fluctuations. We show that future power spectrum measurements with relative uncertainties of $\lesssim 2.5$ per cent should provide unambiguous evidence for an enhancement in the power spectrum on large scales.

astro-ph.CO↗
arXiv2023

The Sherwood-Relics simulations: overview and impact of patchy reionization and pressure smoothing on the intergalactic medium

We present the Sherwood-Relics simulations, a new suite of large cosmological hydrodynamical simulations aimed at modelling the intergalactic medium (IGM) during and after the cosmic reionization of hydrogen. The suite consists of over 200 simulations that cover a wide range of astrophysical and cosmological parameters. It also includes simulations that use a new lightweight hybrid scheme for treating radiative transfer effects. This scheme follows the spatial variations in the ionizing radiation field, as well as the associated fluctuations in IGM temperature and pressure smoothing. It is computationally much cheaper than full radiation hydrodynamics simulations and circumvents the difficult task of calibrating a galaxy formation model to observational constraints on cosmic reionization. Using this hybrid technique, we study the spatial fluctuations in IGM properties that are seeded by patchy cosmic reionization. We investigate the relevant physical processes and assess their impact on the z > 4 Lyman-alpha forest. Our main findings are: (i) Consistent with previous studies patchy reionization causes large scale temperature fluctuations that persist well after the end of reionization, (ii) these increase the Lyman-alpha forest flux power spectrum on large scales, and (iii) result in a spatially varying pressure smoothing that correlates well with the local reionization redshift. (iv) Structures evaporated or puffed up by photoheating cause notable features in the Lyman-alpha forest, such as flat-bottom or double-dip absorption profiles.

astro-ph.CO↗
arXiv2022

Probing quasar lifetimes with proximate $21$-centimetre absorption in the diffuse intergalactic medium at redshifts $z\geq 6$

Enhanced ionizing radiation in close proximity to redshift $z\gtrsim 6$ quasars creates short windows of intergalactic Ly$α$ transmission blueward of the quasar Ly$α$ emission lines. The majority of these Ly$α$ near-zones are consistent with quasars that have optically/UV bright lifetimes of $t_{\rm Q}\sim 10^{5}-10^{7}\rm\,yr$. However, lifetimes as short as $t_{\rm Q}\lesssim 10^{4}\rm\,yr$ appear to be required by the smallest Ly$α$ near-zones. These short lifetimes present an apparent challenge for the growth of $\sim 10^{9}\rm\,M_{\odot}$ black holes at $z\gtrsim 6$. Accretion over longer timescales is only possible if black holes grow primarily in an obscured phase, or if the quasars are variable on timescales comparable to the equilibriation time for ionized hydrogen. Distinguishing between very young quasars and older quasars that have experienced episodic accretion with Ly$α$ absorption alone is challenging, however. We therefore predict the signature of proximate 21-cm absorption around $z\gtrsim 6$ radio-loud quasars. For modest pre-heating of intergalactic hydrogen by the X-ray background, where the spin temperature $T_{\rm S} \lesssim 10^{2}\rm\,K$ prior to any quasar heating, we find proximate 21-cm absorption should be observable in the spectra of radio-loud quasars. The extent of the proximate 21-cm absorption is sensitive to the integrated lifetime of the quasar. Evidence for proximate 21-cm absorption from the diffuse intergalactic medium within $2-3\rm\,pMpc$ of a (radio-loud) quasar would be consistent with a short quasar lifetime, $t_{\rm Q}\lesssim 10^{5}\rm\,yr$, and would provide a complementary constraint on models for high redshift black hole growth.

astro-ph.CO↗
arXiv2022

Hints of dark photon dark matter from observations and hydrodynamical simulations of the low-redshift Lyman-$α$ forest

Recent work has suggested that an additional $\lesssim 6.9 \rm{\, eV}$ per baryon of heating in the intergalactic medium is needed to reconcile hydrodynamical simulations with Lyman-$α$ forest absorption line widths at redshift $z\simeq 0.1$. Resonant conversion of dark photon dark matter into low frequency photons is a viable source of such heating. We perform the first hydrodynamical simulations including dark photon heating and show that dark photons with mass $m_{A'}\sim 8\times 10^{-14}\rm\,eV\,c^{-2}$ and kinetic mixing $ε\sim 5\times 10^{-15}$ can alleviate the heating excess. A prediction of this model is a non-standard thermal history for underdense gas at $z \gtrsim 3$.

hep-ph↗
arXiv2022

Limits on non-canonical heating and turbulence in the intergalactic medium from the low redshift Lyman-alpha forest

We examine the column density distribution function (CDDF) and Doppler parameter distribution from hydrodynamical simulations and Cosmic Origins Spectrograph (COS) observations of the Lyman-alpha forest at redshift $0\leq z\leq 0.2$. Allowing for a factor of two uncertainty in the metagalactic HI photoionisation rate, our hydrodynamical simulations are in good agreement ($1$-$1.5σ$) with the shape and amplitude of the observed CDDF at HI column densities $10^{13.3}\rm\,cm^{-2}\leq N_{\rm HI}\leq 10^{14.5}\rm\,cm^{-2}$. However, the Doppler widths of the simulated lines remain too narrow with respect to the COS data. We argue that invoking AGN feedback does not resolve this discrepancy. We also disfavour enhanced photoheating rates as a potential solution, as this requires an unphysically hard UV background spectrum. If instead appealing to a non-canonical source of heating, an additional specific heat injection of $u \lesssim 6.9\rm\,eV\,m_{\rm p}^{-1}$ is required at $z\lesssim 2.5$ for gas that has $N_{\rm HI}\simeq 10^{13.5}\rm\,cm^{-2}$ by $z=0.1$. Alternatively, there may be an unresolved line of sight turbulent velocity component of $v_{\rm turb}\lesssim 8.5\rm\,km\,s^{-1}(N_{\rm HI}/10^{13.5}\rm\,cm^{-2})^{0.21}$ for the coldest gas in the diffuse IGM.

astro-ph.CO↗