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Jan Magnus Sischka

Publications and source records attributed to Jan Magnus Sischka.

3 recordsLinked to original sources

Hydrodynamic liquid crystal models for lipid bilayers

Coarse-grained continuous descriptions for lipid bilayers are typically based on minimizing the Helfrich energy. Such models consider the fluid properties of these structures only implicitly and have been shown to nicely reproduce equilibrium properties. Model extensions that also address the dynamics of these structures are surface (Navier--)Stokes--Helfrich models. They explicitly account for membrane viscosity. However, these models also usually treat the lipid bilayer as a homogeneous continuum, neglecting the molecular degrees of freedom of the lipids. Here, we derive refined models which consider in addition a scalar order parameter representing the molecular alignment of the lipids along the surface normal. Starting from hydrodynamic surface liquid crystal models, we obtain a hydrodynamic surface Landau--Helfrich model for asymmetric lipid bilayers and a surface Beris--Edwards model for symmetric lipid bilayers. The fully ordered case for both models leads to the known surface (Navier--)Stokes--Helfrich models. Besides more detailed continuous models for lipid bilayers, we therefore also provide an alternative derivation of surface (Navier--)Stokes--Helfrich models.

cond-mat.soft

A numerical approach for the dynamics of active viscoelastic surfaces

The dynamics of active viscoelastic surfaces plays an important role in biological systems. One prominent example is the actin cortex, a thin bio-polymer sheet underneath the outer membrane of biological cells which combines active molecular force generation with viscoelastic behavior characterized by elastic properties at short timescales and viscous properties at longer timescales. We consider a surface Maxwell model within dominant rheology and an additional active term to model the dynamics of the actin cortex. This captures both, shear and dilational surface dynamics. We propose a monolithic numerical approach based on the surface finite element method (SFEM), validate the results for special cases and experimentally demonstrate convergence properties. Moreover, imposing a ring-shaped region of an enhanced active stress mimicking the contractile ring during cytokinesis, we observe different types of emergent patterns and shape dynamics depending on the viscoelastic properties. While viscous surfaces show a ring, which slips to one side of the surface, viscoelasticity provides a stabilization mechanism of the ring, thus forming a requirement for subsequent cell division. This study provides an example that viscoelastic properties are key ingredients to understand biological materials.

physics.bio-ph

The influence of higher order geometric terms on the asymmetry and dynamics of membranes

We consider membranes as fluid deformable surface and allow for higher order geometric terms in the bending energy. The evolution equations are derived and numerically solved using surface finite elements. The higher order geometric terms related to the Gaussian curvature squared have a tendency to stabilize tubes and enhance the evolution towards equilibrium shapes, thereby facilitating rapid shape changes. This is demonstrated in axisymmetric settings and fully three-dimensional simulations.

cond-mat.soft