arXiv subjects

Jarrett Revels

Publications and source records attributed to Jarrett Revels.

4 recordsLinked to original sources

arXiv2018

Dynamic Automatic Differentiation of GPU Broadcast Kernels

We show how forward-mode automatic differentiation (AD) can be employed within larger reverse-mode computations to dynamically differentiate broadcast operations in a GPU-friendly manner. Our technique fully exploits the broadcast Jacobian's inherent sparsity structure, and unlike a pure reverse-mode approach, this "mixed-mode" approach does not require a backwards pass over the broadcasted operation's subgraph, obviating the need for several reverse-mode-specific programmability restrictions on user-authored broadcast operations. Most notably, this approach allows broadcast fusion in primal code despite the presence of data-dependent control flow. We discuss an experiment in which a Julia implementation of our technique outperformed pure reverse-mode TensorFlow and Julia implementations for differentiating through broadcast operations within an HM-LSTM cell update calculation.

cs.MS↗

arXiv2018

Cataloging the Visible Universe through Bayesian Inference at Petascale

Astronomical catalogs derived from wide-field imaging surveys are an important tool for understanding the Universe. We construct an astronomical catalog from 55 TB of imaging data using Celeste, a Bayesian variational inference code written entirely in the high-productivity programming language Julia. Using over 1.3 million threads on 650,000 Intel Xeon Phi cores of the Cori Phase II supercomputer, Celeste achieves a peak rate of 1.54 DP PFLOP/s. Celeste is able to jointly optimize parameters for 188M stars and galaxies, loading and processing 178 TB across 8192 nodes in 14.6 minutes. To achieve this, Celeste exploits parallelism at multiple levels (cluster, node, and thread) and accelerates I/O through Cori's Burst Buffer. Julia's native performance enables Celeste to employ high-level constructs without resorting to hand-written or generated low-level code (C/C++/Fortran), and yet achieve petascale performance.

cs.DC↗

arXiv2016

Robust benchmarking in noisy environments

We propose a benchmarking strategy that is robust in the presence of timer error, OS jitter and other environmental fluctuations, and is insensitive to the highly nonideal statistics produced by timing measurements. We construct a model that explains how these strongly nonideal statistics can arise from environmental fluctuations, and also justifies our proposed strategy. We implement this strategy in the BenchmarkTools Julia package, where it is used in production continuous integration (CI) pipelines for developing the Julia language and its ecosystem.

cs.PF↗

arXiv2016

Forward-Mode Automatic Differentiation in Julia

We present ForwardDiff, a Julia package for forward-mode automatic differentiation (AD) featuring performance competitive with low-level languages like C++. Unlike recently developed AD tools in other popular high-level languages such as Python and MATLAB, ForwardDiff takes advantage of just-in-time (JIT) compilation to transparently recompile AD-unaware user code, enabling efficient support for higher-order differentiation and differentiation using custom number types (including complex numbers). For gradient and Jacobian calculations, ForwardDiff provides a variant of vector-forward mode that avoids expensive heap allocation and makes better use of memory bandwidth than traditional vector mode. In our numerical experiments, we demonstrate that for nontrivially large dimensions, ForwardDiff's gradient computations can be faster than a reverse-mode implementation from the Python-based autograd package. We also illustrate how ForwardDiff is used effectively within JuMP, a modeling language for optimization. According to our usage statistics, 41 unique repositories on GitHub depend on ForwardDiff, with users from diverse fields such as astronomy, optimization, finite element analysis, and statistics. This document is an extended abstract that has been accepted for presentation at the AD2016 7th International Conference on Algorithmic Differentiation.

cs.MS↗