arXiv subjects

Javier Aula-Blasco

Publications and source records attributed to Javier Aula-Blasco.

6 recordsLinked to original sources

arXiv2026

Perspective on Bias in Biomedical AI: Preventing Downstream Healthcare Disparities

Healthcare disparities persist across socioeconomic boundaries, often attributed to unequal access to screening, diagnostics, and therapeutics. However, this perspective highlights that critical biases can emerge much earlier, during data collection and research prioritization, long before clinical implementation, particularly in studies focused on molecular and omics data. A vast number of studies focus on collecting omics data, but the demographic information associated with these datasets is often not reported, and when it is reported, it reveals substantial biases. An automated analysis of 4514 PubMed-indexed omics publications from 2015 to 2024, examining reporting across multiple demographic dimensions, reveals limited reporting overall; for example, only 2.7% of studies report ancestry or ethnicity information and geographic origin reporting is limited to 2.5%. Analysis of large-scale datasets commonly used for model training, such as CellxGene and GEO, reveals substantial population bias where European-ancestry data dominates. As biomedical foundation models become central to biomedical discovery with a paradigm in which base models are pretrained on large datasets and reusing them repeatedly for many different downstream tasks, they risk perpetuating or amplifying these early-stage biases, leading to cascading inequities that regulatory interventions cannot fully reverse. We propose a community-wide focus on three foundational principles: Provenance, Openness, and Reliability through Evaluation Transparency. Together, these principles can help make biases and limitations more visible to model developers and users, supporting more informed model development, evaluation, and deployment decisions in biomedical AI.

cs.AI↗

arXiv2026

MrBERT: Modern Multilingual Encoders via Vocabulary, Domain, and Dimensional Adaptation

We introduce MrBERT, a family of 150M-300M parameter encoders built on the ModernBERT architecture and pre-trained on 35 languages and code. Through targeted adaptation, this model family achieves state-of-the-art results on Catalan- and Spanish-specific tasks, while establishing robust performance across specialized biomedical and legal domains. To bridge the gap between research and production, we incorporate Matryoshka Representation Learning (MRL), enabling flexible vector sizing that significantly reduces inference and storage costs. Ultimately, the MrBERT family demonstrates that modern encoder architectures can be optimized for both localized linguistic excellence and efficient, high-stakes domain specialization. We open source the complete model family on Huggingface.

cs.CL↗

arXiv2025

ACADATA: Parallel Dataset of Academic Data for Machine Translation

We present ACADATA, a high-quality parallel dataset for academic translation, that consists of two subsets: ACAD-TRAIN, which contains approximately 1.5 million author-generated paragraph pairs across 96 language directions and ACAD-BENCH, a curated evaluation set of almost 6,000 translations covering 12 directions. To validate its utility, we fine-tune two Large Language Models (LLMs) on ACAD-TRAIN and benchmark them on ACAD-BENCH against specialized machine-translation systems, general-purpose, open-weight LLMs, and several large-scale proprietary models. Experimental results demonstrate that fine-tuning on ACAD-TRAIN leads to improvements in academic translation quality by +6.1 and +12.4 d-BLEU points on average for 7B and 2B models respectively, while also improving long-context translation in a general domain by up to 24.9% when translating out of English. The fine-tuned top-performing model surpasses the best propietary and open-weight models on academic translation domain. By releasing ACAD-TRAIN, ACAD-BENCH and the fine-tuned models, we provide the community with a valuable resource to advance research in academic domain and long-context translation.

cs.CL↗

arXiv2025

La Leaderboard: A Large Language Model Leaderboard for Spanish Varieties and Languages of Spain and Latin America

Leaderboards showcase the current capabilities and limitations of Large Language Models (LLMs). To motivate the development of LLMs that represent the linguistic and cultural diversity of the Spanish-speaking community, we present La Leaderboard, the first open-source leaderboard to evaluate generative LLMs in languages and language varieties of Spain and Latin America. La Leaderboard is a community-driven project that aims to establish an evaluation standard for everyone interested in developing LLMs for the Spanish-speaking community. This initial version combines 66 datasets in Basque, Catalan, Galician, and different Spanish varieties, showcasing the evaluation results of 50 models. To encourage community-driven development of leaderboards in other languages, we explain our methodology, including guidance on selecting the most suitable evaluation setup for each downstream task. In particular, we provide a rationale for using fewer few-shot examples than typically found in the literature, aiming to reduce environmental impact and facilitate access to reproducible results for a broader research community.

cs.CL↗

arXiv2025

MM-Eval: A Multilingual Meta-Evaluation Benchmark for LLM-as-a-Judge and Reward Models

As Large Language Models (LLMs) are now capable of producing fluent and coherent content in languages other than English, it is not imperative to precisely evaluate these non-English outputs. However, when assessing the outputs from mutlilingual LLMs, prior works often employed LLM based evaluators that excel at assessing English outputs, without a thorough examination of whether these evaluators could effectively assess non-English text as well. Moreover, existing benchmarks to test evaluator LLMs (referred to as "meta-evaluation benchmarks") are mostly English-centric. To bridge this gap and examine whether evaluator LLMs can reliably assess the outputs of multilingual LLMs, we introduce MM-Eval, a multilingual meta-evaluation benchmark comprising five core subsets covering 18 languages and a Language Consistency subset spanning 122 languages. A core attribute of MM-Eval is that, instead of merely translating existing English meta-evaluation benchmarks, it is designed with multilingual-specific challenges in mind. Additionally, unlike existing meta-evaluation benchmarks that focus solely on ranking accuracy over pairwise data, MM-Eval also evaluates the consistency and fairness of absolute score values across a wide range of languages. Our results show that existing evaluator LLMs that excel in English contexts have considerable room for improvement when assessing non-English outputs. Furthermore, we find that evaluators are unfair and inconsistent when evaluating lower-resourced languages. Finally, we validate MM-Eval by measuring its correlation with Best-of-N rankings, finding a significantly stronger correlation compared to other meta-evaluation benchmarks. We publicly release our benchmark and code.

cs.CL↗

arXiv2025

Salamandra Technical Report

This work introduces Salamandra, a suite of open-source decoder-only large language models available in three different sizes: 2, 7, and 40 billion parameters. The models were trained from scratch on highly multilingual data that comprises text in 35 European languages and code. Our carefully curated corpus is made exclusively from open-access data compiled from a wide variety of sources. Along with the base models, supplementary checkpoints that were fine-tuned on public-domain instruction data are also released for chat applications. Additionally, we also share our preliminary experiments on multimodality, which serve as proof-of-concept to showcase potential applications for the Salamandra family. Our extensive evaluations on multilingual benchmarks reveal that Salamandra has strong capabilities, achieving competitive performance when compared to similarly sized open-source models. We provide comprehensive evaluation results both on standard downstream tasks as well as key aspects related to bias and safety.With this technical report, we intend to promote open science by sharing all the details behind our design choices, data curation strategy and evaluation methodology. In addition to that, we deviate from the usual practice by making our training and evaluation scripts publicly accessible. We release all models under a permissive Apache 2.0 license in order to foster future research and facilitate commercial use, thereby contributing to the open-source ecosystem of large language models.

cs.CL↗