arXiv subjects

Jean Pierre Boon

Publications and source records attributed to Jean Pierre Boon.

At least 19 recordsLinked to original sources

arXiv2016

Temporal Fokker-Planck Equations

The temporal Fokker-Plank equation [{\it J. Stat. Phys.}, {\bf 3/4}, 527 (2003)] or propagation-dispersion equation was derived to describe diffusive processes with temporal dispersion rather than spatial dispersion as in classical diffusion. %\cite{boon-grosfils-lutsko}. We present two generalizations of the temporal Fokker-Plank equation for the first passage distribution function $f_j(r,t)$ of a particle moving on a substrate with time delays $τ_j$. Both generalizations follow from the first visit master equation. In the first case, the time delays depend on the local concentration, that is the time delay probability $P_j$ is a functional of the particle distribution function and we show that when the functional dependence is of the power law type, $P_j \propto f_j^{ν- 1}$, the generalized Fokker-Plank equation exhibits a structure similar to that of the nonlinear spatial diffusion equation where the roles of space and time are reversed. In the second case, we consider the situation where the time delays are distributed according to a power law, $P_j \propto τ_j^{-1-α}$ (with $0 < α< 2$), in which case we obtain a fractional propagation-dispersion equation which is the temporal analog of the fractional spatial diffusion equation (with space and time interchanged).

cond-mat.stat-mech↗

arXiv2014

Molecular theory of anomalous diffusion - Application to Fluorescence Correlation Spectroscopy

The nonlinear theory of anomalous diffusion is based on particle interactions giving an explicit microscopic description of diffusive processes leading to sub-, normal, or super-diffusion as a result competitive effects between attractive and repulsive interactions. We present the explicit analytical solution to the nonlinear diffusion equation which we then use to compute the correlation function which is experimentally measured by correlation spectroscopy. The theoretical results are applicable in particular to the analysis of fluorescence correlation spectroscopy of marked molecules in biological systems. More specifically we consider the case of fluorescently labeled lipids and we find that the nonlinear correlation spectrum reproduces very well the experimental data indicating sub-diffusive molecular motion of lipid molecules in the cell membrane.

cond-mat.stat-mech↗

arXiv2014

New comments on "Possible divergences in Tsallis' thermostatistics''

In a recent letter ({\it{EPL}}, {\bf{104}} (2013) 60003; see also {\it {arXiv:1309.5645}}), Plastino and Rocca suggest that the divergences inherent to the formulation of nonextensive statistical mechanics can be eliminated {\it {via}} the use of $q$-Laplace transformation which is illustrated for the case of a kinetic Hamiltonian system, the harmonic oscillator. The suggested new formulation raises questions which are discussed in the present comment.

cond-mat.stat-mech↗

arXiv2013

Comment on "Possible divergences in Tsallis' thermostatistics"

The problematic divergence of the $q$-partition function of the harmonic oscillator recently considered in \cite{plastino} is a particular case of the non-normalizabilty of the distribution function of classical Hamiltonian systems in non-extensive thermostatistics as discussed previously in \cite{lutsko-boon}.

cond-mat.stat-mech↗

arXiv2013

Molecular theory of anomalous diffusion

We present a Master Equation formulation based on a Markovian random walk model that exhibits sub-diffusion, classical diffusion and super-diffusion as a function of a single parameter. The non-classical diffusive behavior is generated by allowing for interactions between a population of walkers. At the macroscopic level, this gives rise to a nonlinear Fokker-Planck equation. The diffusive behavior is reflected not only in the mean-squared displacement ($ \sim t^γ$ with $0 <γ\leq 1.5$) but also in the existence of self-similar scaling solutions of the Fokker-Planck equation. We give a physical interpretation of sub- and super-diffusion in terms of the attractive and repulsive interactions between the diffusing particles and we discuss analytically the limiting values of the exponent $γ$. Simulations based on the Master Equation are shown to be in agreement with the analytical solutions of the nonlinear Fokker-Planck equation in all three diffusion regimes.

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arXiv2011

A microscopic approach to nonlinear Reaction-Diffusion: the case of morphogen gradient formation

We develop a microscopic theory for reaction-difusion (R-D) processes based on a generalization of Einstein's master equation with a reactive term and we show how the mean field formulation leads to a generalized R-D equation with non-classical solutions. For the $n$-th order annihilation reaction $A+A+A+...+A\rightarrow 0$, we obtain a nonlinear reaction-diffusion equation for which we discuss scaling and non-scaling formulations. We find steady states with either solutions exhibiting long range power law behavior (for $n>α$) showing the relative dominance of sub-diffusion over reaction effects in constrained systems, or conversely solutions (for $n<α<n+1$) with finite support of the concentration distribution describing situations where diffusion is slow and extinction is fast. Theoretical results are compared with experimental data for morphogen gradient formation.

cond-mat.stat-mech↗

arXiv2009

Complexity, time and music

The concept of complexity as considered in terms of its algorithmic definition proposed by G.J. Chaitin and A.N. Kolmogorov is revisited for the dynamical complexity of music. When music pieces are cast in the form of time series of pitch variations, concepts of dynamical systems theory can be used to define new quantities such as the {\em dimensionality} as a measure of the {\em global temporal dynamics} of a music piece, and the Shanon {\em entropy} as an evaluation of its {\em local dynamics}. When these quantities are computed explicitly for sequences sampled in the music literature from the 18th to the 20th century, no indication is found of a systematic increase in complexity paralleling historically the evolution of classical western music, but the analysis suggests that the fractional nature of art might have an intrinsic value of more general significance.

physics.soc-ph↗

arXiv2009

Is the Tsallis entropy stable?

The question of whether the Tsallis entropy is Lesche-stable is revisited. It is argued that when physical averages are computed with the escort probabilities, the correct application of the concept of Lesche-stability requires use of the escort probabilities. As a consequence, as shown here, the Tsallis entropy is unstable but the thermodynamic averages are stable. We further show that Lesche stability as well as thermodynamic stability can be obtained if the homogeneous entropy is used as the basis of the formulation of non-extensive thermodynamics. In this approach, the escort distribution arises naturally as a secondary structure.

cond-mat.stat-mech↗

arXiv2007

Generalized Diffusion

The Fokker-Planck equation for the probability $f(r,t)$ to find a random walker at position $r$ at time $t$ is derived for the case that the the probability to make jumps depends nonlinearly on $f(r,t)$. The result is a generalized form of the classical Fokker-Planck equation where the effects of drift, due to a violation of detailed balance, and of external fields are also considered. It is shown that in the absence of drift and external fields a scaling solution, describing anomalous diffusion, is only possible if the nonlinearity in the jump probability is of the power law type ($\sim f^{η}(r,t)$), in which case the generalized Fokker-Planck equation reduces to the well-known Porous Media equation. Monte-Carlo simulations are shown to confirm the theoretical results.

cond-mat.stat-mech↗

arXiv2006

Statistics of precursors to fingering processes

We present an analysis of the statistical properties of hydrodynamic field fluctuations which reveal the existence of precursors to fingering processes. These precursors are found to exhibit power law distributions, and these power laws are shown to follow from spatial $q$-Gaussian structures which are solutions to the generalized non-linear diffusion equation.

cond-mat.stat-mech↗

arXiv2005

Generalized diffusion equation

Modern analyses of diffusion processes have proposed nonlinear versions of the Fokker-Planck equation to account for non-classical diffusion. These nonlinear equations are usually constructed on a phenomenological basis. Here we introduce a nonlinear transformation by defining the $q$-generating function which, when applied to the intermediate scattering function of classical statistical mechanics, yields, in a mathematically systematic derivation, a generalized form of the advection-diffusion equation in Fourier space. Its solutions are discussed and suggest that the $q$-generating function approach should be a useful tool to generalize classical diffusive transport formulations.

cond-mat.stat-mech↗

arXiv2005

Nonextensive diffusion as nonlinear response

The porous media equation has been proposed as a phenomenological ``non-extensive'' generalization of classical diffusion. Here, we show that a very similar equation can be derived, in a systematic manner, for a classical fluid by assuming nonlinear response, i.e. that the diffusive flux depends on gradients of a power of the concentration. The present equation distinguishes from the porous media equation in that it describes \emph{% generalized classical} diffusion, i.e. with $r/\sqrt Dt$ scaling, but with a generalized Einstein relation, and with power-law probability distributions typical of nonextensive statistical mechanics.

cond-mat.stat-mech↗

arXiv2005

Random and deterministic walks on lattices

Random walks of particles on a lattice are a classical paradigm for the microscopic mechanism underlying diffusive processes. In deterministic walks, the role of space and time can be reversed, and the microscopic dynamics can produce quite different types of behavior such as directed propagation and organization, which appears to be generic behaviors encountered in an important class of systems. The various aspects of classical and not so classical walks on latices are reviewed with emphasis on the physical phenomena that can be treated through a lattice dynamics approach.

cond-mat.stat-mech↗

arXiv2005

Nonextensive statistics in viscous fingering

Measurements in turbulent flows have revealed that the velocity field in nonequilibrium systems exhibits $q$-exponential or power law distributions in agreement with theoretical arguments based on nonextensive statistical mechanics. Here we consider Hele-Shaw flow as simulated by the Lattice Boltzmann method and find similar behavior from the analysis of velocity field measurements. For the transverse velocity, we obtain a spatial $q$-Gaussian profile and a power law velocity distribution over all measured decades. To explain these results, we suggest theoretical arguments based on Darcy's law combined with the non-linear advection-diffusion equation for the concentration field. Power law and $q$-exponential distributions are the signature of nonequilibrium systems with long-range interactions and/or long-time correlations, and therefore provide insight to the mechanism of the onset of fingering processes.

cond-mat.stat-mech↗

arXiv2003

Temporal Diffusion

We consider the general problem of the first passage distribution of particles whose displacements are subject to time delays. We show that this problem gives rise to a \emph{propagation-dispersion equation} which is obtained as the continuous limit of the exact microscopic \emph{first visit equation}. The propagation-dispersion equation should be contrasted with the advection-diffusion equation as the roles of space and time are reversed, hence the name \emph{temporal diffusion}, which is a generic behavior encountered in an important class of systems.

cond-mat.stat-mech↗

arXiv2002

Propagation-Dispersion Equation

A {\em propagation-dispersion equation} is derived for the first passage distribution function of a particle moving on a substrate with time delays. The equation is obtained as the continuous limit of the {\em first visit equation}, an exact microscopic finite difference equation describing the motion of a particle on a lattice whose sites operate as {\em time-delayers}. The propagation-dispersion equation should be contrasted with the advection-diffusion equation (or the classical Fokker-Planck equation) as it describes a dispersion process in {\em time} (instead of diffusion in space) with a drift expressed by a propagation speed with non-zero bounded values. The {\em temporal dispersion} coefficient is shown to exhibit a form analogous to Taylor's dispersivity. Physical systems where the propagation-dispersion equation applies are discussed.

cond-mat.stat-mech↗

arXiv2002

Viscous fingering in miscible, immiscible and reactive fluids

With the Lattice Boltzmann method (using the BGK approximation) we investigate the dynamics of Hele-Shaw flow under conditions corresponding to various experimental systems. We discuss the onset of the instability (dispersion relation), the static properties (characterization of the interface) and the dynamic properties (growth of the mixing zone) of simulated Hele-Shaw systems. We examine the role of reactive processes (between the two fluids) and we show that they have a sharpening effect on the interface similar to the effect of surface tension.

cond-mat.stat-mech↗

arXiv2001

Lattice gas automaton approach to "Turbulent Diffusion"

A periodic Kolmogorov type flow is implemented in a lattice gas automaton. For given aspect ratios of the automaton universe and within a range of Reynolds number values, the averaged flow evolves towards a stationary two-dimensional $ABC$ type flow. We show the analogy between the streamlines of the flow in the automaton and the phase plane trajectories of a dynamical system. In practice flows are commonly studied by seeding the fluid with suspended particles which play the role of passive tracers. Since an actual flow is time-dependent and has fluctuations, the tracers exhibit interesting intrinsic dynamics. When tracers are implemented in the automaton and their trajectories are followed, we find that the tracers displacements obey a diffusion law, with ``super-diffusion'' in the direction orthogonal to the direction of the initial forcing.

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