arXiv subjects

Jean-Frédéric Gerbeau

Publications and source records attributed to Jean-Frédéric Gerbeau.

6 recordsLinked to original sources

arXiv2020

Fast reconstruction of 3D blood flows from Doppler ultrasound images and reduced models

This paper deals with the problem of building fast and reliable 3D reconstruction methods for blood flows for which partial information is given by Doppler ultrasound measurements. This task is of interest in medicine since it could enrich the available information used in the diagnosis of certain diseases which is currently based essentially on the measurements coming from ultrasound devices. The fast reconstruction of the full flow can be performed with state estimation methods that have been introduced in recent years and that involve reduced order models. One simple and efficient strategy is the so-called Parametrized Background Data-Weak approach (PBDW). It is a linear mapping that consists in a least squares fit between the measurement data and a linear reduced model to which a certain correction term is added. However, in the original approach, the reduced model is built a priori and independently of the reconstruction task (typically with a proper orthogonal decomposition or a greedy algorithm). In this paper, we investigate the construction of other reduced spaces which are built to be better adapted to the reconstruction task and which result in mappings that are sometimes nonlinear. We compare the performance of the different algorithms on numerical experiments involving synthetic Doppler measurements. The results illustrate the superiority of the proposed alternatives to the classical linear PBDW approach.

math.NA↗

arXiv2015

Numerical simulation of electrocardiograms for full cardiac cycles in healthy and pathological conditions

This work is dedicated to the simulation of full cycles of the electrical activity of the heart and the corresponding body surface potential. The model is based on a realistic torso and heart anatomy, including ventricles and atria. One of the specificities of our approach is to model the atria as a surface, which is the kind of data typically provided by medical imaging for thin volumes. The bidomain equations are considered in their usual formulation in the ventricles, and in a surface formulation on the atria. Two ionic models are used: the Courtemanche-Ramirez-Nattel model on the atria, and the "Minimal model for human Ventricular action potentials" (MV) by Bueno-Orovio, Cherry and Fenton in the ventricles. The heart is weakly coupled to the torso by a Robin boundary condition based on a resistor- capacitor transmission condition. Various ECGs are simulated in healthy and pathological conditions (left and right bundle branch blocks, Bachmann's bundle block, Wolff-Parkinson-White syndrome). To assess the numerical ECGs, we use several qualitative and quantitative criteria found in the medical literature. Our simulator can also be used to generate the signals measured by a vest of electrodes. This capability is illustrated at the end of the article.

physics.med-ph↗

arXiv2015

Identification of weakly coupled multiphysics problems. Application to the inverse problem of electrocardiography

This work addresses the inverse problem of electrocardiography from a new perspective, by combining electrical and mechanical measurements. Our strategy relies on the defini-tion of a model of the electromechanical contraction which is registered on ECG data but also on measured mechanical displacements of the heart tissue typically extracted from medical images. In this respect, we establish in this work the convergence of a sequential estimator which combines for such coupled problems various state of the art sequential data assimilation methods in a unified consistent and efficient framework. Indeed we ag-gregate a Luenberger observer for the mechanical state and a Reduced Order Unscented Kalman Filter applied on the parameters to be identified and a POD projection of the electrical state. Then using synthetic data we show the benefits of our approach for the estimation of the electrical state of the ventricles along the heart beat compared with more classical strategies which only consider an electrophysiological model with ECG measurements. Our numerical results actually show that the mechanical measurements improve the identifiability of the electrical problem allowing to reconstruct the electrical state of the coupled system more precisely. Therefore, this work is intended to be a first proof of concept, with theoretical justifications and numerical investigations, of the ad-vantage of using available multi-modal observations for the estimation and identification of an electromechanical model of the heart.

math.NA↗

arXiv2014

Approximated Lax Pairs for the Reduced Order Integration of Nonlinear Evolution Equations

A reduced-order model algorithm, called ALP, is proposed to solve nonlinear evolution partial differential equations. It is based on approximations of generalized Lax pairs. Contrary to other reduced-order methods, like Proper Orthogonal Decomposition, the basis on which the solution is searched for evolves in time according to a dynamics specific to the problem. It is therefore well-suited to solving problems with progressive front or wave propagation. Another difference with other reduced-order methods is that it is not based on an off-line / on-line strategy. Numerical examples are shown for the linear advection, KdV and FKPP equations, in one and two dimensions.

math.NA↗

arXiv2012

Reduced-Order Modeling based on Approximated Lax Pairs

A reduced-order model algorithm, based on approximations of Lax pairs, is proposed to solve nonlinear evolution partial differential equations. Contrary to other reduced-order methods, like Proper Orthogonal Decomposition, the space where the solution is searched for evolves according to a dynamics specific to the problem. It is therefore well-suited to solving problems with progressive waves or front propagation. Numerical examples are shown for the KdV and FKPP (nonlinear reaction diffusion) equations, in one and two dimensions.

math.NA↗

arXiv2011

Reduced-order modeling for cardiac electrophysiology. Application to parameter identification

A reduced-order model based on Proper Orthogonal Decomposition (POD) is proposed for the bidomain equations of cardiac electrophysiology. Its accuracy is assessed through electrocardiograms in various configurations, including myocardium infarctions and long-time simulations. We show in particular that a restitution curve can efficiently be approximated by this approach. The reduced-order model is then used in an inverse problem solved by an evolutionary algorithm. Some attempts are presented to identify ionic parameters and infarction locations from synthetic ECGs.

math.NA↗