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Jeffrey G. Mangum

Publications and source records attributed to Jeffrey G. Mangum.

At least 19 recordsLinked to original sources

Testing the Physical Parameter Constraining Power of HCN and HNC with Neural Networks

We quantify the utility of HCN and HNC to characterize gas conditions in the nearby starburst galaxy NGC 253. We use measurements from the Atacama Large Millimeter/Submillimeter Array (ALMA) Large Program ALCHEMI: the ALMA Comprehensive High-resolution Molecular Inventory. Using different subsets of the eight total HCN and HNC transitions measured by ALCHEMI, we test the number and combinations of transitions necessary for constraining the temperature, H$_2$ volume and column densities, cosmic-ray ionization rate, and beam-filling factor in three representative regions within NGC 253. We use these combinations of HCN and HNC transitions to constrain chemical and radiative transfer models and infer the gas conditions using a Bayesian nested sampling algorithm combined with neural network models for increased efficiency. By comparing the shapes of the resulting posterior distributions, as well as the medians and uncertainties for each gas parameter, from each test case to what we obtain with the full set of eight transitions (the control), we quantify how well each test reproduces the control. We find that multiple transitions each of both molecules are required to obtain a median parameter value within a factor of 2 of the control with an uncertainty less than 2-3 times that of the control. We also find that transition combinations that feature a range of upper-state energies are most effective. We show that single transitions, such as HCN J = 1-0 or 3-2, are among the worst-performing combinations and result in parameter values up to an order of magnitude different than the control.

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How To Use Thermal Dust Continuum Emission To Measure The Physical Properties Of Dusty Astrophysical Objects

Dust grains in the interstellar medium interact with photons across the electromagnetic spectrum. They are generally photon energy converters, absorbing short wavelength radiation and emitting long wavelength radiation. Sixty years ago in 1965, thermal emission from dust grains in the interstellar medium was discovered. This tutorial is a summary of the physics of thermal dust continuum emission and how to use observations of the intensity and flux density of dusty objects to calculate physical properties such as mass, column density, luminosity, dust temperature, and dust opacity spectral index. Equations are derived, when feasible, from first principles with all limits and assumptions explicitly stated. Properties of dust opacities appropriate for different astrophysical environments (e.g. diffuse ISM, dense cores, protoplanetary disks) are discussed and tabulated for the wavelengths of past, current, and future bolometer cameras. Corrections for observations at high redshift as well as the effects of telescope measurement limitations are derived. We also update the calculation of the mean molecular weight in different ISM environments and find that it is 1.404 per H atom, 2.809 per H2 molecule, and 2.351 per gas particle assuming protosolar metallicity and the latest values of the ISM gas phase abundances of metals.

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Spatially-resolved spectro-photometric SED Modeling of NGC 253's Central Molecular Zone I. Studying the star formation in extragalactic giant molecular clouds

Studying the interstellar medium in nearby starbursts is essential for understanding the physical mechanisms driving these objects, thought to resemble young star-forming galaxies. This study aims to analyze the physical properties of the first spatially-resolved multi-wavelength SED of an extragalactic source, spanning six decades in frequency (from near-UV to cm wavelengths) at an angular resolution of 3$^{\prime\prime}$ (51 pc at the distance of NGC,253). We focus on the central molecular zone (CMZ) of NGC,253, which contains giant molecular clouds (GMCs) responsible for half of the galaxy's star formation. We use archival data, spanning optical to centimeter wavelengths, to compute SEDs with the GalaPy and CIGALE codes for validation, and analyze stellar optical spectra with the \textsc{starlight} code. Our results show significant differences between central and external GMCs in terms of stellar and dust masses, star formation rates (SFRs), and bolometric luminosities. We identify the best SFR tracers as radio continuum bands at 33 GHz, radio recombination lines, and the total infrared luminosity (L$_{\rm IR}$; 8-1000$μ$m), as well as 60$μ$m IR emission. BPT and WHAN diagrams indicate shock signatures in NGC~253's nuclear region, associating it with AGN/star-forming hybrids, though the AGN fraction is negligible ($\leq$7.5%). Our findings show significant heterogeneity in the CMZ, with central GMCs exhibiting higher densities, SFRs, and dust masses compared to external GMCs. We confirm that certain centimeter photometric bands can reliably estimate global SFR at GMC scales.

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Components of star formation in NGC 253 : Non-negative Matrix Factorization Analysis with the ALCHEMI integrated intensity images

It is essential to examine the physical or chemical properties of molecular gas in starburst galaxies to reveal the underlying mechanisms characterizing starbursts. We used non-negative matrix factorization (NMF) to extract individual molecular or physical components involved in the star formation process in NGC\,253. We used images of 148 transitions from 44 different species of the ALMA large program ALCHEMI. Additionally, we included the continuum images at ALMA Bands 3 and 7 from the same dataset. For the five NMF components (NF1--5), we obtained that their distributions correspond to various basic phenomena related to star formation: i) low-density gas extended through the galactic central molecular zone (NF2), ii) shocks (NF3), iii) starburst regions (NF4), and iv) young star-forming regions (NF5). The other component (NF1) is related to excitation; three components obtained by NMF (NF3, 1, and 5) show a strong dependence upon the upper state energies of transitions, and represent low-, intermediate-, and high-excitation, respectively. We also compared our results using principal component analysis (PCA) previously applied to the same dataset. Molecular components extracted from NMF are similar to the ones obtained from PCA. However, NMF is better at extracting components associated with a single physical component, while a single component in PCA usually contains information on multiple physical components. This is especially true for features with weak intensities like emission from outflows. Our results suggest that NMF can be one of promising methods interpreting molecular line survey data, especially in the upcoming era of wide-band receivers.

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Neural Network Constraints on the Cosmic-Ray Ionization Rate and Other Physical Conditions in NGC 253 with ALCHEMI Measurements of HCN and HNC

We use a neural network model and ALMA observations of HCN and HNC to constrain the physical conditions, most notably the cosmic-ray ionization rate (CRIR, zeta), in the Central Molecular Zone (CMZ) of the starburst galaxy NGC 253. Using output from the chemical code UCLCHEM, we train a neural network model to emulate UCLCHEM and derive HCN and HNC molecular abundances from a given set of physical conditions. We combine the neural network with radiative transfer modeling to generate modeled integrated intensities, which we compare to measurements of HCN and HNC from the ALMA Large Program ALCHEMI. Using a Bayesian nested sampling framework, we constrain the CRIR, molecular gas volume and column densities, kinetic temperature, and beam-filling factor across NGC 253's CMZ. The neural network model successfully recovers UCLCHEM molecular abundances with about 3 percent error and, when used with our Bayesian inference algorithm, increases the parameter inference speed tenfold. We create images of these physical parameters across NGC 253's CMZ at 50 pc resolution and find that the CRIR, in addition to the other gas parameters, is spatially variable with zeta a few times 10^{14} s^{-1} at greater than 100 pc from the nucleus, increasing to zeta greater than 10^{-13} s^{-1} at its center. These inferred CRIRs are consistent within 1 dex with theoretical predictions based on non-thermal emission. Additionally, the high CRIRs estimated in NGC 253's CMZ can be explained by the large number of cosmic-ray-producing sources as well as a potential suppression of cosmic-ray diffusion near their injection sites.

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Physical Properties of the Southwest Outflow Streamer in the Starburst Galaxy NGC 253 with ALCHEMI

The physical properties of galactic molecular outflows are important as they could constrain outflow formation mechanisms. We study the properties of the southwest (SW) outflow streamer including gas kinematics, optical depth, dense gas fraction, and shock strength in the central molecular zone of the starburst galaxy NGC 253. We image the molecular emission at a spatial resolution of $\sim$27 pc based on data from the ALCHEMI program. We trace the kinematics of molecular gas with CO(1-0) line. We constrain the optical depth of CO emission with CO/$^{13}$CO(1-0) ratio, the dense gas fraction with HCN/CO(1-0) ratio, as well as the shock strength with SiO(2-1)/$^{13}$CO(1-0) ratio. The CO/$^{13}$CO(1-0) integrated intensity ratio is $\sim$21 in the SW streamer region, which approximates the C/$^{13}$C isotopic abundance ratio. The higher integrated intensity ratio compared to the disk can be attributed to the optically thinner environment for CO(1-0) emission inside the SW streamer. The HCN/CO(1-0) and SiO(2-1)/$^{13}$CO(1-0) integrated intensity ratios both approach $\sim$0.2 in three giant molecular clouds (GMCs) at the base of the outflow streamers, which implies the higher dense gas fraction and enhanced strength of fast shocks in those GMCs than in the disk. The contours of those two integrated intensity ratios are extended towards the directions of outflow streamers, which connects the enhanced dense gas fraction and shock strength with molecular outflow. Moreover, the molecular gas with enhanced dense gas fraction and shock strength located at the base of the SW streamer shares the same velocity with the outflow. These phenomena suggest that the star formation inside the GMCs can trigger the shocks and further drive the molecular outflow.

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A spectacular galactic scale magnetohydrodynamic powered wind in ESO 320-G030

How galaxies regulate nuclear growth through gas accretion by supermassive black holes (SMBHs) is one of the most fundamental questions in galaxy evolution. One potential way to regulate nuclear growth is through a galactic wind that removes gas from the nucleus. It is unclear whether galactic winds are powered by jets, mechanical winds, radiation, or via magnetohydrodynamic (MHD) processes. Compact obscured nuclei (CONs) represent a significant phase of galactic nuclear growth. These galaxies hide growing SMBHs or unusual starbursts in their very opaque, extremely compact (r $<$ 100 pc) centres. They are found in approximately 30 % of the luminous and ultra-luminous infrared galaxy (LIRG and ULIRG) population. Here, we present high-resolution ALMA observations ($\sim$30 mas, $\sim$5 pc) of ground-state and vibrationally excited HCN towards ESO 320-G030 (IRAS 11506-3851). ESO 320-G030 is an isolated luminous infrared galaxy known to host a compact obscured nucleus and a kiloparsec-scale molecular wind. Our analysis of these high-resolution observations excludes the possibility of a starburst-driven wind, a mechanically or energy driven active galactic nucleus (AGN) wind, and exposes a molecular MDH wind. These results imply that the nuclear evolution of galaxies and the growth of SMBHs are similar to the growth of hot cores or protostars where gravitational collapse of the nuclear torus drives a MHD wind. These results mean galaxies are capable, in part, of regulating the evolution of their nuclei without feedback.

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The ALCHEMI atlas: principal component analysis reveals starburst evolution in NGC 253

Molecular lines are powerful diagnostics of the physical and chemical properties of the interstellar medium (ISM). These ISM properties, which affect future star formation, are expected to differ in starburst galaxies from those of more quiescent galaxies. We investigate the ISM properties in the central molecular zone of the nearby starburst galaxy NGC 253 using the ultra-wide millimeter spectral scan survey from the ALMA Large Program ALCHEMI. We present an atlas of velocity-integrated images at a 1".6 resolution of 148 unblended transitions from 44 species, including the first extragalactic detection of HCNH$^+$ and the first interferometric images of C$_3$H$^+$, NO, HCS$^+$. We conduct a principal component analysis (PCA) on these images to extract correlated chemical species and to identify key groups of diagnostic transitions. To the best of our knowledge, our dataset is currently the largest astronomical set of molecular lines to which PCA has been applied. The PCA can categorize transitions coming from different physical components in NGC 253 such as i) young starburst tracers characterized by high-excitation transitions of HC$_3$N and complex organic molecules (COMs) versus tracers of on-going star formation (radio recombination lines) and high-excitation transitions of CCH and CN tracing PDRs, ii) tracers of cloud-collision-induced shocks (low-excitation transitions of CH$_3$OH, HNCO, HOCO$^+$, and OCS) versus shocks from star-formation-induced outflows (high-excitation transitions of SiO), as well as iii) outflows showing emission from HOC$^+$, CCH, H$_3$O$^+$, CO isotopologues, HCN, HCO$^+$, CS, and CN. Our findings show these intensities vary with galactic dynamics, star formation activities, and stellar feedback.

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Volume density structure of the NGC253 CMZ through ALCHEMI excitation analysis

We present a spatially-resolved excitation analysis for the central molecular zone (CMZ) of the starburst galaxy NGC 253 using the data from the ALMA Large program ALCHEMI, whereby we explore parameters distinguishing NGC 253 from the quiescent Milky Way's Galactic Center (GC). Non-LTE analyses employing a hierarchical Bayesian framework are applied to Band 3-7 transitions from nine molecular species to delineate the position-position-velocity distributions of column density ($N_\mathrm{H_2}$), volume density ($n_\mathrm{H_2}$), and temperature ($T_\mathrm{kin}$) at 27 pc resolution. Two distinct components are detected: a low-density component with $(n_\mathrm{H_2},\ T_\mathrm{kin})\sim(10^{3.3}\ \mathrm{cm}^{-3}, 85 K)$ and a high-density component with $(n_\mathrm{H_2},\ T_\mathrm{kin})\sim (10^{4.4}\ \mathrm{cm}^{-3}, 110\ \mathrm{K})$, separated at $n_\mathrm{H_2}\sim10^{3.8}\ \mathrm{cm}^{-3}$. NGC 253 has $\sim10$ times the high-density gas mass and $\sim3$ times the dense-gas mass fraction of the GC. These properties are consistent with their HCN/CO ratio but cannot alone explain the factor of $\sim30$ difference in their star formation efficiencies (SFEs), contradicting the dense-gas mass to star formation rate scaling law. The $n_\mathrm{H_2}$ histogram toward NGC 253 exhibits a shallow declining slope up to $n_\mathrm{H_2}\sim10^6\ \mathrm{cm}^{-3}$, while that of the GC steeply drops in $n_\mathrm{H_2}\gtrsim10^{4.5}\ \mathrm{cm}^{-3}$ and vanishes at $10^5\ \mathrm{cm}^{-3}$. Their dense-gas mass fraction ratio becomes consistent with their SFEs when the threshold $n_\mathrm{H_2}$ for the dense gas is taken at $\sim 10^{4.2\mbox{-}4.6}\ \mathrm{cm}^{-3}$. The rich abundance of gas above this density range in the NGC 253 CMZ, or its scarcity in the GC, is likely to be the critical difference characterizing the contrasting star formation in the centers of the two galaxies.

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Tracing Interstellar Heating: An ALCHEMI Measurement of the HCN Isomers in NGC 253

We analyze HCN and HNC emission in the nearby starburst galaxy NGC 253 to investigate its effectiveness in tracing heating processes associated with star formation. This study uses multiple HCN and HNC rotational transitions observed using ALMA via the ALCHEMI Large Program. To understand the conditions and associated heating mechanisms within NGC 253's dense gas, we employ Bayesian nested sampling techniques applied to chemical and radiative transfer models which are constrained using our HCN and HNC measurements. We find that the volume density $n_{\text{H}_{2}}$ and cosmic ray ionization rate (CRIR) $ζ$ are enhanced by about an order of magnitude in the galaxy's central regions as compared to those further from the nucleus. In NGC 253's central GMCs, where observed HCN/HNC abundance ratios are lowest, $n \sim 10^{5.5}$ cm$^{-3}$ and $ζ\sim 10^{-12}$ s$^{-1}$ (greater than $10^4$ times the average Galactic rate). We find a positive correlation in the association of both density and CRIR with the number of star formation-related heating sources (supernova remnants, HII regions, and super hot cores) located in each GMC, as well as a correlation between CRIRs and supernova rates. Additionally, we see an anticorrelation between the HCN/HNC ratio and CRIR, indicating that this ratio will be lower in regions where $ζ$ is higher. Though previous studies suggested HCN and HNC may reveal strong mechanical heating processes in NGC 253's CMZ, we find cosmic ray heating dominates the heating budget, and mechanical heating does not play a significant role in the HCN and HNC chemistry.

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Energizing Star Formation: The Cosmic Ray Ionization Rate in NGC 253 Derived From ALCHEMI Measurements of H$_3$O$^+$ and SO

The cosmic ray ionization rate (CRIR) is a key parameter in understanding the physical and chemical processes in the interstellar medium. Cosmic rays are a significant source of energy in star formation regions, which impacts the physical and chemical processes which drive the formation of stars. Previous studies of the circum-molecular zone (CMZ) of the starburst galaxy NGC 253 have found evidence for a high CRIR value; $10^3-10^6$ times the average cosmic ray ionization rate within the Milky Way. This is a broad constraint and one goal of this study is to determine this value with much higher precision. We exploit ALMA observations towards the central molecular zone of NGC 253 to measure the CRIR. We first demonstrate that the abundance ratio of H$_3$O$^+$ and SO is strongly sensitive to the CRIR. We then combine chemical and radiative transfer models with nested sampling to infer the gas properties and CRIR of several star-forming regions in NGC 253 due to emission from their transitions. We find that each of the four regions modelled has a CRIR in the range $(1-80)\times10^{-14}$ s$^{-1}$ and that this result adequately fits the abundances of other species that are believed to be sensitive to cosmic rays including C$_2$H, HCO$^+$, HOC$^+$, and CO. From shock and PDR/XDR models, we further find that neither UV/X-ray driven nor shock dominated chemistry are a viable single alternative as none of these processes can adequately fit the abundances of all of these species.

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Starburst Energy Feedback Seen Through HCO$^+$/HOC$^+$ Emission in NGC 253 from ALCHEMI

Molecular abundances are sensitive to UV-photon flux and cosmic-ray ionization rate. In starburst environments, the effects of high-energy photons and particles are expected to be stronger. We examine these astrochemical signatures through multiple transitions of HCO$^+$ and its metastable isomer HOC$^+$ in the center of the starburst galaxy NGC 253 using data from the ALMA large program ALCHEMI. The distribution of the HOC$^+$(1-0) integrated intensity shows its association with "superbubbles", cavities created either by supernovae or expanding HII regions. The observed HCO$^+$/HOC$^+$ abundance ratios are $\sim 10-150$, and the fractional abundance of HOC$^+$ relative to H$_2$ is $\sim 1.5\times 10^{-11} - 6\times 10^{-10}$, which implies that the HOC$^+$ abundance in the center of NGC 253 is significantly higher than in quiescent spiral-arm dark clouds in the Galaxy and the Galactic center clouds. Comparison with chemical models implies either an interstellar radiation field of $G_0\gtrsim 10^3$ if the maximum visual extinction is $\gtrsim 5$, or a cosmic-ray ionization rate of $ζ\gtrsim 10^{-14}$ s$^{-1}$ (3-4 orders of magnitude higher than that within clouds in the Galactic spiral-arms) to reproduce the observed results. From the difference in formation routes of HOC$^+$, we propose that a low-excitation line of HOC$^+$ traces cosmic-ray dominated regions, while high-excitation lines trace photodissociation regions. Our results suggest that the interstellar medium in the center of NGC 253 is significantly affected by energy input from UV-photons and cosmic rays, sources of energy feedback.

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Offline Correction of Atmospheric Effects on Single-Dish Radio Spectroscopy

We present a method to mitigate the atmospheric effects (residual atmospheric lines) in single-dish radio spectroscopy caused by the elevation difference between the target and reference positions. The method is developed as a script using the Atmospheric Transmission at Microwaves (ATM) library built into the Common Astronomy Software Applications (CASA) package. We apply the method to the data taken with the Total Power Array of the Atacama Large Millimeter/submillimeter Array. The intensities of the residual atmospheric (mostly O3) lines are suppressed by, typically, an order of magnitude for the tested cases. The parameters for the ATM model can be optimized to minimize the residual line and, for a specific O3 line at 231.28 GHz, a seasonal dependence of a best-fitting model parameter is demonstrated. The method will be provided as a task within the CASA package in the near future. The atmospheric removal method we developed can be used by any radio/millimeter/submillimeter observatory to improve the quality of its spectroscopic measurements.

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Fire in the Heart: A Characterization of the High Kinetic Temperatures and Heating Sources in the Nucleus of NGC253

The nuclear starburst within the central $\sim 15^{\prime\prime}$ ($\sim 250$ pc; $1^{\prime\prime} \simeq 17$ pc) of NGC253 has been extensively studied as a prototype for the starburst phase in galactic evolution. Atacama Large Millimeter/submillimeter Array (ALMA) imaging within receiver Bands 6 and 7 have been used to investigate the dense gas structure, kinetic temperature, and heating processes which drive the NGC253 starburst. Twenty-nine transitions from fifteen molecular species/isotopologues have been identified and imaged at $1.^{\prime\prime}5$ to $0.^{\prime\prime}4$ resolution, allowing for the identification of five of the previously-studied giant molecular clouds (GMCs) within the central molecular zone (CMZ) of NGC253. Ten transitions from the formaldehyde (H$_2$CO) molecule have been used to derive the kinetic temperature within the $\sim 0.^{\prime\prime}5$ to $5^{\prime\prime}$ dense-gas structures imaged. On $\sim 5^{\prime\prime}$ scales we measure $T_K \gtrsim 50$ K, while on size scales $\lesssim 1^{\prime\prime}$ we measure $T_K \gtrsim 300$ K. These kinetic temperature measurements further delineate the association between potential sources of dense gas heating. We have investigated potential heating sources by comparing our measurements to models which predict the physical conditions associated with dense molecular clouds that possess a variety of heating mechanisms. This comparison has been supplemented with tracers of recently-formed massive stars (Br$γ$) and shocks ([FeII]). Derived molecular column densities point to a radially-decreasing abundance of molecules with sensitivity to cosmic ray and mechanical heating within the NGC253 CMZ. These measurements are consistent with radio spectral index calculations which suggest a higher concentration of cosmic ray producing supernova remnants within the central 10 pc of NGC253.

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CCAT-prime: a novel telescope for submillimeter astronomy

The CCAT-prime telescope is a 6-meter aperture, crossed-Dragone telescope, designed for millimeter and sub-millimeter wavelength observations. It will be located at an altitude of 5600 meters, just below the summit of Cerro Chajnantor in the high Atacama region of Chile. The telescope's unobscured optics deliver a field of view of almost 8 degrees over a large, flat focal plane, enabling it to accommodate current and future instrumentation fielding >100k diffraction-limited beams for wavelengths less than a millimeter. The mount is a novel design with the aluminum-tiled mirrors nested inside the telescope structure. The elevation housing has an integrated shutter that can enclose the mirrors, protecting them from inclement weather. The telescope is designed to co-host multiple instruments over its nominal 15 year lifetime. It will be operated remotely, requiring minimum maintenance and on-site activities due to the harsh working conditions on the mountain. The design utilizes nickel-iron alloy (Invar) and carbon-fiber-reinforced polymer (CFRP) materials in the mirror support structure, achieving a relatively temperature-insensitive mount. We discuss requirements, specifications, critical design elements, and the expected performance of the CCAT-prime telescope. The telescope is being built by CCAT Observatory, Inc., a corporation formed by an international partnership of universities. More information about CCAT and the CCAT-prime telescope can be found at www.ccatobservatory.org.

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HI Kinematics Along The Minor Axis of M82

M82 is one of the best studied starburst galaxies in the local universe, and is consequently a benchmark for studying star formation feedback at both low and high redshift. We present new VLA HI observations that reveal the cold gas kinematics along the minor axis in unprecedented detail. This includes the detection of HI up to 10 kpc along the minor axis toward the South and beyond 5 kpc to the North. A surprising aspect of these observations is that the line-of-sight HI velocity decreases substantially from about 120 km/s to 50 km/s from 1.5 to 10 kpc off the midplane. The velocity profile is not consistent with the HI gas cooling from the hot wind. We demonstrate that the velocity decrease is substantially greater than the deceleration expected from gravitational forces alone. If the HI consists of a continuous population of cold clouds, some additional drag force must be present, and the magnitude of the drag force places a joint constraint on the ratio of the ambient medium to the typical cloud size and density. We also show that the HI kinematics are inconsistent with a simple conical outflow centered on the nucleus, but instead require the more widespread launch of the HI over the ~1 kpc extent of the starburst region. Regardless of the launch mechanism for the HI gas, the observed velocity decrease along the minor axis is sufficiently great that the HI may not escape the halo of M82. We estimate the HI outflow rate is much less than 1 M$_{\odot}$ per year at 10 kpc off the midplane.

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How to Calculate Molecular Column Density

The calculation of the molecular column density from molecular spectral (rotational or ro-vibrational) transition measurements is one of the most basic quantities derived from molecular spectroscopy. Starting from first principles where we describe the basic physics behind the radiative and collisional excitation of molecules and the radiative transfer of their emission, we derive a general expression for the molecular column density. As the calculation of the molecular column density involves a knowledge of the molecular energy level degeneracies, rotational partition functions, dipole moment matrix elements, and line strengths, we include generalized derivations of these molecule-specific quantities. Given that approximations to the column density equation are often useful, we explore the optically thin, optically thick, and low-frequency limits to our derived general molecular column density relation. We also evaluate the limitations of the common assumption that the molecular excitation temperature is constant, and address the distinction between beam- and source-averaged column densities. We conclude our discussion of the molecular column density with worked examples for C$^{18}$O, C$^{17}$O, N$_2$H$^+$, NH$_3$, and H$_2$CO. Ancillary information on some subtleties involving line profile functions, conversion between integrated flux and brightness temperature, the calculation of the uncertainty associated with an integrated intensity measurement, the calculation of spectral line optical depth using hyperfine or isotopologue measurements, the calculation of the kinetic temperature from a symmetric molecule excitation temperature measurement, and relative hyperfine intensity calculations for NH$_3$ are presented in appendices. The intent of this document is to provide a reference for researchers studying astrophysical molecular spectroscopic measurements.

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Atmospheric Refractive Electromagnetic Wave Bending and Propagation Delay

In this tutorial we summarize the physics and mathematics behind refractive electromagnetic wave bending and delay. Refractive bending and delay through the Earth's atmosphere at both radio/millimetric and optical/IR wavelengths are discussed, but with most emphasis on the former, and with Atacama Large Millimeter Array (ALMA) applications in mind. As modern astronomical measurements often require sub-arcsecond position accuracy, care is required when selecting refractive bending and delay algorithms. For the spherically-uniform model atmospheres generally used for all refractive bending and delay algorithms, positional accuracies $\lesssim 1^{\prime\prime}$ are achievable when observing at zenith angles $\lesssim 75^\circ$. A number of computationally economical approximate methods for atmospheric refractive bending and delay calculation are presented, appropriate for astronomical observations under these conditions. For observations under more realistic atmospheric conditions, for zenith angles $\gtrsim 75^\circ$, or when higher positional accuracy is required, more rigorous refractive bending and delay algorithms must be employed. For accurate calculation of the refractive bending, we recommend the Auer & Standish (2000) method, using numerical integration to ray-trace through a two-layer model atmosphere, with an atmospheric model determination of the atmospheric refractivity. For the delay calculation we recommend numerical integration through a model atmosphere.

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