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Jennifer M. Groh

Publications and source records attributed to Jennifer M. Groh.

2 recordsLinked to original sources

Modeling Neural Switching via Drift-Diffusion Models

Neural encoding is a field in neuroscience that focuses on characterizing how information from stimuli is encoded in the spiking activity of neurons. When more than one stimulus is present, a theory known as multiplexing posits that neurons temporally switch between encoding various stimuli, creating a fluctuating firing pattern. Here, we propose a new statistical framework to analyze rate fluctuations and discern whether neurons employ multiplexing as a means of encoding multiple stimuli. We adopt a mechanistic approach to modeling multiplexing by constructing a non-Markovian endogenous state-space model. Specifically, we posit that multiplexing arises from competition between the stimuli, which are modeled as latent drift-diffusion processes. We propose a new MCMC algorithm for conducting posterior inference on similar types of state-space models, where typical state-space MCMC methods fail due to strong dependence between the parameters. In addition, we develop alternative models that represent a wide class of alternative encoding theories and perform model comparison using WAIC to determine whether the data suggest the occurrence multiplexing over alternative theories of neural encoding. Using the proposed framework, we provide evidence of multiplexing within the inferior colliculus and novel insight into the switching dynamics.

stat.ME

Sensitivity and specificity of a Bayesian single trial analysis for time varying neural signals

We recently reported the existence of fluctuations in neural signals that may permit neurons to code multiple simultaneous stimuli sequentially across time. This required deploying a novel statistical approach to permit investigation of neural activity at the scale of individual trials. Here we present tests using synthetic data to assess the sensitivity and specificity of this analysis. We fabricated datasets to match each of several potential response patterns derived from single-stimulus response distributions. In particular, we simulated dual stimulus trial spike counts that reflected fluctuating mixtures of the single stimulus spike counts, stable intermediate averages, single stimulus winner-take-all, or response distributions that were outside the range defined by the single stimulus responses (such as summation or suppression). We then assessed how well the analysis recovered the correct response pattern as a function of the number of simulated trials and the difference between the simulated responses to each "stimulus" alone. We found excellent recovery of the mixture, intermediate, and outside categories (>97% percent correct), and good recovery of the single/winner-take-all category (>90% correct) when the number of trials was >20 and the single-stimulus response rates were 50Hz and 20Hz respectively. Both larger numbers of trials and greater separation between the single stimulus firing rates improved categorization accuracy. These results provide a benchmark, and guidelines for data collection, for use of this method to investigate coding of multiple items at the individual-trial time scale.

q-bio.NC