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Jeremias Knoblauch

Publications and source records attributed to Jeremias Knoblauch.

At least 19 recordsLinked to original sources

Exact Sampling of Gibbs Measures with Estimated Losses

A popular strategy for ameliorating some of the shortcomings of Bayesian posterior inference is to instead target a Gibbs measure based on losses that connect a parameter of interest to observed data, and which are known to be robust to misspecification. Existing theory for these procedures treats these losses as being analytically available, but in many situations these losses must be stochastically estimated using pseudo-observations. In these settings, and even under strong assumptions, we show that posteriors based on standard Markov chain Monte Carlo (MCMC) algorithms exhibit strong dependence on the number of these pseudo-observations, and require utilizing a diverging number of pseudo-observations to ensure posterior concentration. To remedy this issue, we introduce a modified piecewise deterministic Markov process (PDMP) sampler, and formally show that its posterior draws have no dependence on the number of pseudo-observations used to estimate the loss within a Gibbs measure. We verify the practical utility of this approach on five examples spanning intractable likelihoods and intractable losses.

math.ST

Can Bayesian Optimization Efficiently Find a Strong Single Expert in Neural Thickets?

Gradient-free post-training has emerged as a compelling alternative to gradient-based optimization for large language models (LLMs), but existing approaches remain costly. We ask whether structured search can identify a strong single expert under a modest evaluation budget. Motivated by evidence that useful weight updates lie in low-dimensional subspaces, we apply Bayesian optimization within a random linear embedding of weight space. Our method requires no backpropagation and uses a Gaussian process surrogate to guide candidate evaluations efficiently. Across several reasoning benchmarks with Qwen2.5-Instruct models from 0.5B to 3B parameters, Bayesian optimization using five times less candidate evaluations matches or exceeds RandOpt. These results show that surrogate-guided search can substantially reduce the evaluation cost of gradient-free post-training while producing stronger deployable single experts.

cs.LG

Conjugate Generalized Bayesian Inference for Discrete Doubly Intractable Problems

Doubly intractable problems occur when both the likelihood and the posterior are available only in unnormalized form, with computationally intractable normalization constants. Bayesian inference then typically requires direct approximation of the posterior through specialized and typically expensive MCMC methods. In this paper, we provide a computationally efficient alternative in the form of a novel generalized Bayesian posterior that allows for conjugate, closed-form or Gibbs-based MCMC inference within the class of exponential family models for discrete data. We derive theoretical guarantees to characterize the asymptotic behavior of the generalized posterior, supporting its use for inference. The method is evaluated on a range of challenging intractable exponential family models, including the Conway-Maxwell-Poisson graphical model of multivariate count data, autoregressive discrete time series models, and Markov random fields such as the Ising and Potts models. The computational gains are significant; in our experiments, the method is between 10 and 6000 times faster than state-of-the-art Bayesian computational methods.

stat.ME

Predictively Oriented Posteriors

We advocate for a new statistical principle that combines the most desirable aspects of both parameter inference and density estimation. This leads us to the predictively oriented (PrO) posterior, which expresses uncertainty as a consequence of predictive ability. We show that these posteriors converge to the predictively optimal model average and predictively dominate both classical and generalised Bayes posterior predictive distributions. Further, PrO posteriors adapt to the level of model misspecification: while they concentrate around the true model in the same way as classical and generalised Bayesian strategies if the model can recover the data-generating distribution, they do not concentrate around a single model in the presence of non-trivial forms of model misspecification. Instead, they stabilise towards a non-degenerate predictively optimal posterior distribution that represents a form of irreducible uncertainty due to model misspecification. We put forward a sampling algorithm for PrO posteriors based on mean field Langevin dynamics, and verify the practical significance of our theoretical developments on a number of numerical examples.

stat.ME

TabMGP: Martingale Posterior with TabPFN

Bayesian inference provides principled uncertainty quantification but is often limited by the challenges of prior and likelihood elicitation. The martingale posterior (MGP) (Fong et al., 2023) offers an alternative by replacing these requirements with a predictive rule. In addition, the MGP focuses inference on parameters defined through a loss function. This framework is especially resonant in the era of foundation transformers; practitioners increasingly leverage models like TabPFN for their state-of-the-art capabilities, yet often require epistemic uncertainty for a scientific estimand $θ$ that need not parameterise the implicit latent model. The MGP provides a mechanism to recover these posterior distributions. We introduce TabMGP, an MGP built on TabPFN for tabular data. TabMGP produces credible sets with near-nominal coverage and often outperforms both handcrafted MGP constructions and standard Bayesian baselines.

stat.ME

Robust Bayesian Optimisation with Unbounded Corruptions

Bayesian Optimization is critically vulnerable to extreme outliers. Existing provably robust methods typically assume a bounded cumulative corruption budget, which makes them defenseless against even a single corruption of sufficient magnitude. To address this, we introduce a new adversary whose budget is only bounded in the frequency of corruptions, not in their magnitude. We then derive RCGP-UCB, an algorithm coupling the famous upper confidence bound (UCB) approach with a Robust Conjugate Gaussian Process (RCGP). We present stable and adaptive versions of RCGP-UCB, and prove that they achieve sublinear regret in the presence of up to $O(T^{1/4})$ and $O(T^{1/7})$ corruptions with possibly infinite magnitude. This robustness comes at near zero cost: without outliers, RCGP-UCB's regret bounds match those of the standard GP-UCB algorithm.

stat.ML

Multi-Output Robust and Conjugate Gaussian Processes

Multi-output Gaussian process (MOGP) regression allows modelling dependencies among multiple correlated response variables. Similarly to standard Gaussian processes, MOGPs are sensitive to model misspecification and outliers, which can distort predictions within individual outputs. This situation can be further exacerbated by multiple anomalous response variables whose errors propagate due to correlations between outputs. To handle this situation, we extend and generalise the robust and conjugate Gaussian process (RCGP) framework introduced by Altamirano et al. (2024). This results in the multi-output RCGP (MO-RCGP): a provably robust MOGP that is conjugate, and jointly captures correlations across outputs. We thoroughly evaluate our approach through applications in finance and cancer research.

stat.ML

Robust and Conjugate Spatio-Temporal Gaussian Processes

State-space formulations allow for Gaussian process (GP) regression with linear-in-time computational cost in spatio-temporal settings, but performance typically suffers in the presence of outliers. In this paper, we adapt and specialise the robust and conjugate GP (RCGP) framework of Altamirano et al. (2024) to the spatio-temporal setting. In doing so, we obtain an outlier-robust spatio-temporal GP with a computational cost comparable to classical spatio-temporal GPs. We also overcome the three main drawbacks of RCGPs: their unreliable performance when the prior mean is chosen poorly, their lack of reliable uncertainty quantification, and the need to carefully select a hyperparameter by hand. We study our method extensively in finance and weather forecasting applications, demonstrating that it provides a reliable approach to spatio-temporal modelling in the presence of outliers.

stat.CO

Predictive performance of power posteriors

We analyse the impact of using tempered likelihoods in the production of posterior predictions. While the choice of temperature has an impact on predictive performance in small samples, we formally show that in moderate-to-large samples, tempering does not impact posterior predictions.

math.ST

Prediction-Centric Uncertainty Quantification via MMD

Deterministic mathematical models, such as those specified via differential equations, are a powerful tool to communicate scientific insight. However, such models are necessarily simplified descriptions of the real world. Generalised Bayesian methodologies have been proposed for inference with misspecified models, but these are typically associated with vanishing parameter uncertainty as more data are observed. In the context of a misspecified deterministic mathematical model, this has the undesirable consequence that posterior predictions become deterministic and certain, while being incorrect. Taking this observation as a starting point, we propose Prediction-Centric Uncertainty Quantification, where a mixture distribution based on the deterministic model confers improved uncertainty quantification in the predictive context. Computation of the mixing distribution is cast as a (regularised) gradient flow of the maximum mean discrepancy (MMD), enabling consistent numerical approximations to be obtained. Results are reported on both a toy model from population ecology and a real model of protein signalling in cell biology.

stat.ME

Near-Optimal Approximations for Bayesian Inference in Function Space

We propose a scalable inference algorithm for Bayes posteriors defined on a reproducing kernel Hilbert space (RKHS). Given a likelihood function and a Gaussian random element representing the prior, the corresponding Bayes posterior measure $Π_{\text{B}}$ can be obtained as the stationary distribution of an RKHS-valued Langevin diffusion. We approximate the infinite-dimensional Langevin diffusion via a projection onto the first $M$ components of the Kosambi-Karhunen-Loève expansion. Exploiting the thus obtained approximate posterior for these $M$ components, we perform inference for $Π_{\text{B}}$ by relying on the law of total probability and a sufficiency assumption. The resulting method scales as $O(M^3+JM^2)$, where $J$ is the number of samples produced from the posterior measure $Π_{\text{B}}$. Interestingly, the algorithm recovers the posterior arising from the sparse variational Gaussian process (SVGP) (see Titsias, 2009) as a special case, owed to the fact that the sufficiency assumption underlies both methods. However, whereas the SVGP is parametrically constrained to be a Gaussian process, our method is based on a non-parametric variational family $\mathcal{P}(\mathbb{R}^M)$ consisting of all probability measures on $\mathbb{R}^M$. As a result, our method is provably close to the optimal $M$-dimensional variational approximation of the Bayes posterior $Π_{\text{B}}$ in $\mathcal{P}(\mathbb{R}^M)$ for convex and Lipschitz continuous negative log likelihoods, and coincides with SVGP for the special case of a Gaussian error likelihood.

stat.ML

Robustifying likelihoods by optimistically re-weighting data

Likelihood-based inferences have been remarkably successful in wide-spanning application areas. However, even after due diligence in selecting a good model for the data at hand, there is inevitably some amount of model misspecification: outliers, data contamination or inappropriate parametric assumptions such as Gaussianity mean that most models are at best rough approximations of reality. A significant practical concern is that for certain inferences, even small amounts of model misspecification may have a substantial impact; a problem we refer to as brittleness. This article attempts to address the brittleness problem in likelihood-based inferences by choosing the most model friendly data generating process in a distance-based neighborhood of the empirical measure. This leads to a new Optimistically Weighted Likelihood (OWL), which robustifies the original likelihood by formally accounting for a small amount of model misspecification. Focusing on total variation (TV) neighborhoods, we study theoretical properties, develop estimation algorithms and illustrate the methodology in applications to mixture models and regression.

stat.ME

Robust and Conjugate Gaussian Process Regression

To enable closed form conditioning, a common assumption in Gaussian process (GP) regression is independent and identically distributed Gaussian observation noise. This strong and simplistic assumption is often violated in practice, which leads to unreliable inferences and uncertainty quantification. Unfortunately, existing methods for robustifying GPs break closed-form conditioning, which makes them less attractive to practitioners and significantly more computationally expensive. In this paper, we demonstrate how to perform provably robust and conjugate Gaussian process (RCGP) regression at virtually no additional cost using generalised Bayesian inference. RCGP is particularly versatile as it enables exact conjugate closed form updates in all settings where standard GPs admit them. To demonstrate its strong empirical performance, we deploy RCGP for problems ranging from Bayesian optimisation to sparse variational Gaussian processes.

stat.ML

Outlier-robust Kalman Filtering through Generalised Bayes

We derive a novel, provably robust, and closed-form Bayesian update rule for online filtering in state-space models in the presence of outliers and misspecified measurement models. Our method combines generalised Bayesian inference with filtering methods such as the extended and ensemble Kalman filter. We use the former to show robustness and the latter to ensure computational efficiency in the case of nonlinear models. Our method matches or outperforms other robust filtering methods (such as those based on variational Bayes) at a much lower computational cost. We show this empirically on a range of filtering problems with outlier measurements, such as object tracking, state estimation in high-dimensional chaotic systems, and online learning of neural networks.

stat.ML

A Rigorous Link between Deep Ensembles and (Variational) Bayesian Methods

We establish the first mathematically rigorous link between Bayesian, variational Bayesian, and ensemble methods. A key step towards this it to reformulate the non-convex optimisation problem typically encountered in deep learning as a convex optimisation in the space of probability measures. On a technical level, our contribution amounts to studying generalised variational inference through the lense of Wasserstein gradient flows. The result is a unified theory of various seemingly disconnected approaches that are commonly used for uncertainty quantification in deep learning -- including deep ensembles and (variational) Bayesian methods. This offers a fresh perspective on the reasons behind the success of deep ensembles over procedures based on parameterised variational inference, and allows the derivation of new ensembling schemes with convergence guarantees. We showcase this by proposing a family of interacting deep ensembles with direct parallels to the interactions of particle systems in thermodynamics, and use our theory to prove the convergence of these algorithms to a well-defined global minimiser on the space of probability measures.

stat.ML

Generalised Bayesian Inference for Discrete Intractable Likelihood

Discrete state spaces represent a major computational challenge to statistical inference, since the computation of normalisation constants requires summation over large or possibly infinite sets, which can be impractical. This paper addresses this computational challenge through the development of a novel generalised Bayesian inference procedure suitable for discrete intractable likelihood. Inspired by recent methodological advances for continuous data, the main idea is to update beliefs about model parameters using a discrete Fisher divergence, in lieu of the problematic intractable likelihood. The result is a generalised posterior that can be sampled from using standard computational tools, such as Markov chain Monte Carlo, circumventing the intractable normalising constant. The statistical properties of the generalised posterior are analysed, with sufficient conditions for posterior consistency and asymptotic normality established. In addition, a novel and general approach to calibration of generalised posteriors is proposed. Applications are presented on lattice models for discrete spatial data and on multivariate models for count data, where in each case the methodology facilitates generalised Bayesian inference at low computational cost.

stat.ME

Robust and Scalable Bayesian Online Changepoint Detection

This paper proposes an online, provably robust, and scalable Bayesian approach for changepoint detection. The resulting algorithm has key advantages over previous work: it provides provable robustness by leveraging the generalised Bayesian perspective, and also addresses the scalability issues of previous attempts. Specifically, the proposed generalised Bayesian formalism leads to conjugate posteriors whose parameters are available in closed form by leveraging diffusion score matching. The resulting algorithm is exact, can be updated through simple algebra, and is more than 10 times faster than its closest competitor.

stat.ML

Robust Bayesian Inference for Simulator-based Models via the MMD Posterior Bootstrap

Simulator-based models are models for which the likelihood is intractable but simulation of synthetic data is possible. They are often used to describe complex real-world phenomena, and as such can often be misspecified in practice. Unfortunately, existing Bayesian approaches for simulators are known to perform poorly in those cases. In this paper, we propose a novel algorithm based on the posterior bootstrap and maximum mean discrepancy estimators. This leads to a highly-parallelisable Bayesian inference algorithm with strong robustness properties. This is demonstrated through an in-depth theoretical study which includes generalisation bounds and proofs of frequentist consistency and robustness of our posterior. The approach is then assessed on a range of examples including a g-and-k distribution and a toggle-switch model.

stat.ME