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Jeremy Logan

Publications and source records attributed to Jeremy Logan.

5 recordsLinked to original sources

Ground-Level Near Real-Time Modeling for PM2.5 Pollution Prediction

Air pollution is a worldwide public health threat that can cause or exacerbate many illnesses, including respiratory disease, cardiovascular disease, and some cancers. However, epidemiological studies and public health decision-making are stymied by the inability to assess pollution exposure impacts in near real time. To address this, developing accurate digital twins of environmental pollutants will enable timely data-driven analytics - a crucial step in modernizing health policy and decision-making. Although other models predict and analyze fine particulate matter exposure, they often rely on modeled input data sources and data streams that are not regularly updated. Another challenge stems from current models relying on predefined grids. In contrast, our deep-learning approach interpolates surface level PM2.5 concentrations between sparsely distributed US EPA monitoring stations in a grid-free manner. By incorporating additional, readily available datasets - including topographic, meteorological, and land-use data - we improve its ability to predict pollutant concentrations with high spatial and temporal resolution. This enables model querying at any spatial location for rapid predictions without computing over the entire grid. To ensure robustness, we randomize spatial sampling during training to enable our model to perform well in both dense and sparse monitored regions. This model is well suited for near real-time deployment because its lightweight architecture allows for fast updates in response to streaming data. Moreover, model flexibility and scalability allow it to be adapted to various geographical contexts and scales, making it a practical tool for delivering accurate and timely air quality assessments. Its capacity to rapidly evaluate multiple scenarios can be especially valuable for decision-making during public health crises.

stat.AP

Centralized Health and Exposomic Resource (C-HER): Analytic and AI-Ready Data for External Exposomic Research

The Centralized Health and Exposomic Resource (C-HER) project has identified, profiled, spatially indexed, and stored over 30 external exposomic datasets. The resulting analytic and AI-ready data (AAIRD) provides a significant opportunity to develop an integrated picture of the exposome for health research. The exposome is a conceptual framework designed to guide the study of the complex environmental and genetic factors that together shape human health. Few composite measures of the exposome exist due to the high dimensionality of exposure data, multimodal data sources, and varying spatiotemporal scales. We develop a data engineering solution that overcomes the challenges of spatio-temporal linkage in this field. We provide examples of how environmental data can be combined to characterize a region, model air pollution, or provide indicators for cancer research. The development of AAIRD will allow future studies to use ML and deep learning methods to generate spatial and contextual exposure data for disease prediction.

stat.AP

Radon Exposure Dataset

Exposure to elevated radon levels in the home is one of the leading causes of lung cancer in the world. The following study describes the creation of a comprehensive, state-level dataset designed to enable the modeling and prediction of household radon concentrations at Zip Code Tabulation Area (ZCTA) and sub-kilometer scales. Details include the data collection and processing involved in compiling physical and demographic factors for Pennsylvania and Utah. Attempting to mitigate this risk requires identifying the underlying geological causes and the populations that might be at risk. This work focuses on identifying at-risk populations throughout Pennsylvania and Utah, where radon levels are some of the highest in the country. The resulting dataset harmonizes geological and demographic factors from various sources and spatial resolutions, including temperature, geochemistry, and soil characteristics. Demographic variables such as the household heating fuel used, the age of building, and the housing type provide further insight into which populations could be most susceptible in areas with potentially high radon levels. This dataset also serves as a foundational resource for two other studies conducted by the authors. The resolution of the data provides a novel approach to predicting potential radon exposure, and the data processing conducted for these states can be scaled up to larger spatial resolutions (e.g., the Contiguous United States [CONUS]) and allow for a broad reclassification of radon exposure potential in the United States.

cs.CE

F*** workflows: when parts of FAIR are missing

The FAIR principles for scientific data (Findable, Accessible, Interoperable, Reusable) are also relevant to other digital objects such as research software and scientific workflows that operate on scientific data. The FAIR principles can be applied to the data being handled by a scientific workflow as well as the processes, software, and other infrastructure which are necessary to specify and execute a workflow. The FAIR principles were designed as guidelines, rather than rules, that would allow for differences in standards for different communities and for different degrees of compliance. There are many practical considerations which impact the level of FAIR-ness that can actually be achieved, including policies, traditions, and technologies. Because of these considerations, obstacles are often encountered during the workflow lifecycle that trace directly to shortcomings in the implementation of the FAIR principles. Here, we detail some cases, without naming names, in which data and workflows were Findable but otherwise lacking in areas commonly needed and expected by modern FAIR methods, tools, and users. We describe how some of these problems, all of which were overcome successfully, have motivated us to push on systems and approaches for fully FAIR workflows.

cs.DL

Towards 1ULP evaluation of Daubechies Wavelets

We present algorithms to numerically evaluate Daubechies wavelets and scaling functions to high relative accuracy. These algorithms refine the suggestion of Daubechies and Lagarias to evaluate functions defined by two-scale difference equations using splines; carefully choosing amongst a family of rapidly convergent interpolators which effectively capture all the smoothness present in the function and whose error term admits a small asymptotic constant. We are also able to efficiently compute derivatives, though with a smoothness-induced reduction in accuracy. An implementation is provided in the Boost Software Library.

math.NA