arXiv subjects

Jeroen Vermeulen

Publications and source records attributed to Jeroen Vermeulen.

3 recordsLinked to original sources

arXiv2026

Robust retinal biometrics for patient identity verification and retrieval across age and imaging devices

Patient identity errors can compromise longitudinal medical records, research databases, and downstream clinical decisions. We present a retinal biometric system for verifying claimed identities and retrieving the correct identity from color fundus images. We trained a 512-dimensional metric-learning encoder combining a ConvNeXtV2 backbone with ArcFace and triplet losses on 227,004 images from 21,851 patient-eye identities in the Rotterdam Study, spanning multiple imaging devices and up to 32.6 years of follow-up. The system was evaluated on held-out Rotterdam Study data and externally on the UK Biobank and Age-Related Eye Disease Study (AREDS). Before evaluation, we used the model to screen for identity inconsistencies and manually adjudicated flagged images, identifying incorrect assignments in 0.588% of Rotterdam Study images, 0.259% of UK Biobank images, and 0.164% of AREDS images. In retrospective-only verification after removing near-duplicate images, the system achieved AUROCs of 0.9998, 0.9997, and 0.9998 in the Rotterdam Study, UK Biobank, and AREDS, respectively. For identity retrieval using only previously acquired images, Recall@1 was 99.7%, 97.2%, and 97.6%, respectively, from galleries averaging 4436-8510 identities; the correct identity appeared among the top five results in at least 98.6% of cases. Performance remained robust across imaging devices and long follow-up intervals, while lower image quality and inconsistent retinal fields accounted for most failures. These findings establish retinal anatomy as a durable biometric signal, useful for safeguarding the integrity of longitudinal imaging records.

cs.CV↗

arXiv2026

Rotterdam artery-vein segmentation (RAV) dataset

Purpose: To provide a diverse, high-quality dataset of color fundus images (CFIs) with detailed artery-vein (A/V) segmentation annotations, supporting the development and evaluation of machine learning algorithms for vascular analysis in ophthalmology. Methods: CFIs were sampled from the longitudinal Rotterdam Study (RS), encompassing a wide range of ages, devices, and capture conditions. Images were annotated using a custom interface that allowed graders to label arteries, veins, and unknown vessels on separate layers, starting from an initial vessel segmentation mask. Connectivity was explicitly verified and corrected using connected component visualization tools. Results: The dataset includes 1024x1024-pixel PNG images in three modalities: original RGB fundus images, contrast-enhanced versions, and RGB-encoded A/V masks. Image quality varied widely, including challenging samples typically excluded by automated quality assessment systems, but judged to contain valuable vascular information. Conclusion: This dataset offers a rich and heterogeneous source of CFIs with high-quality segmentations. It supports robust benchmarking and training of machine learning models under real-world variability in image quality and acquisition settings. Translational Relevance: By including connectivity-validated A/V masks and diverse image conditions, this dataset enables the development of clinically applicable, generalizable machine learning tools for retinal vascular analysis, potentially improving automated screening and diagnosis of systemic and ocular diseases.

eess.IV↗

arXiv2024

VascX Models: Model Ensembles for Retinal Vascular Analysis from Color Fundus Images

We introduce VascX models, a comprehensive set of model ensembles for analyzing retinal vasculature from color fundus images (CFIs). Annotated CFIs were aggregated from public datasets . Additional CFIs, mainly from the population-based Rotterdam Study were annotated by graders for arteries and veins at pixel level, resulting in a dataset diverse in patient demographics and imaging conditions. VascX models demonstrated superior segmentation performance across datasets, image quality levels, and anatomic regions when compared to existing, publicly available models, likely due to the increased size and variety of our training set. Important improvements were observed in artery-vein and disc segmentation performance, particularly in segmentations of these structures on CFIs of intermediate quality, common in large cohorts and clinical datasets. Importantly, these improvements translated into significantly more accurate vascular features when we compared features extracted from VascX segmentation masks with features extracted from segmentation masks generated by previous models. With VascX models we provide a robust, ready-to-use set of model ensembles and inference code aimed at simplifying the implementation and enhancing the quality of automated retinal vasculature analyses. The precise vessel parameters generated by the model can serve as starting points for the identification of disease patterns in and outside of the eye.

eess.IV↗