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Jesse Patsolic

Publications and source records attributed to Jesse Patsolic.

3 recordsLinked to original sources

Manifold Oblique Random Forests: Towards Closing the Gap on Convolutional Deep Networks

Decision forests (Forests), in particular random forests and gradient boosting trees, have demonstrated state-of-the-art accuracy compared to other methods in many supervised learning scenarios. In particular, Forests dominate other methods in tabular data, that is, when the feature space is unstructured, so that the signal is invariant to a permutation of the feature indices. However, in structured data lying on a manifold (such as images, text, and speech) deep networks (Networks), specifically convolutional deep networks (ConvNets), tend to outperform Forests. We conjecture that at least part of the reason for this is that the input to Networks is not simply the feature magnitudes, but also their indices. In contrast, naive Forest implementations fail to explicitly consider feature indices. A recently proposed Forest approach demonstrates that Forests, for each node, implicitly sample a random matrix from some specific distribution. These Forests, like some classes of Networks, learn by partitioning the feature space into convex polytopes corresponding to linear functions. We build on that approach and show that one can choose distributions in a manifold-aware fashion to incorporate feature locality. We demonstrate the empirical performance on data whose features live on three different manifolds: a torus, images, and time-series. Moreover, we demonstrate its strength in multivariate simulated settings and also show superiority in predicting surgical outcome in epilepsy patients and predicting movement direction from raw stereotactic EEG data from non-motor brain regions. In all simulations and real data, Manifold Oblique Random Forest (MORF) algorithm outperforms approaches that ignore feature space structure and challenges the performance of ConvNets. Moreover, MORF runs fast and maintains interpretability and theoretical justification.

cs.LG

A Community-Developed Open-Source Computational Ecosystem for Big Neuro Data

Big imaging data is becoming more prominent in brain sciences across spatiotemporal scales and phylogenies. We have developed a computational ecosystem that enables storage, visualization, and analysis of these data in the cloud, thusfar spanning 20+ publications and 100+ terabytes including nanoscale ultrastructure, microscale synaptogenetic diversity, and mesoscale whole brain connectivity, making NeuroData the largest and most diverse open repository of brain data.

q-bio.NC

Trinomials defining quintic number fields

Given a quintic number field $K/\mathbb{Q}$, we study the set of irreducible trinomials, polynomials of the form $x^{5} + ax + b$, that have a root in $K$. We show that there is a genus four curve $C_{K}$ whose rational points are in bijection with such trinomials. This curve $C_{K}$ maps to an elliptic curve defined over a number field, and using this map, we are able (in some cases) to determine all the rational points on $C_{K}$ using elliptic curve Chabauty.

math.NT