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Jhonathan Barrios

Publications and source records attributed to Jhonathan Barrios.

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Topological Detection of Hopf Bifurcations via Persistent Homology: A Functional Criterion from Time Series

We propose a topological framework for detecting Hopf-type dynamical transitions directly from scalar time series. The method combines delay-coordinate reconstruction with persistent homology and uses the maximum persistence of one-dimensional homology classes as a scalar descriptor of cyclic structure. For the supercritical Hopf setting, we derive finite-resolution persistence bounds that relate detectability of the reconstructed periodic orbit to its geometry, sampling quality, and finite-data perturbations. A derivative-based estimator is then introduced to localize the critical parameter from the sampled topological functional. The approach is evaluated on the Hopf normal form, the Lorenz system, and a reduced Belousov--Zhabotinsky model. The numerical experiments show accurate finite-resolution localization of the corresponding transitions and illustrate the effects of embedding parameters, temporal sampling, smoothing, observational noise, and transient removal. These results support persistent homology as an interpretable data-driven tool for detecting geometric reorganizations in nonlinear time series.

math.DS

Topological descriptors of foot clearance gait dynamics improve differential diagnosis of Parkinsonism

Differential diagnosis among parkinsonian syndromes remains a clinical challenge due to overlapping motor symptoms and subtle gait abnormalities. Accurate differentiation is crucial for treatment planning and prognosis. While gait analysis is a well established approach for assessing motor impairments, conventional methods often overlook hidden nonlinear and structural features embedded in foot clearance patterns. We evaluated Topological Data Analysis (TDA) as a complementary tool for Parkinsonism classification using foot clearance time series. Persistent homology produced Betti curves, persistence landscapes, and silhouettes, which were used as features for a Random Forest classifier. The dataset comprised 15 controls (CO), 15 idiopathic Parkinson's disease (IPD), and 14 vascular Parkinsonism (VaP). Models were assessed with leave-one-out cross-validation (LOOCV). Betti-curve descriptors consistently yielded the strongest results. For IPD vs VaP, foot clearance variables minimum toe clearance, maximum toe late swing, and maximum heel clearance achieved 83% accuracy and AUC=0.89 under LOOCV in the medicated (On) state. Performance improved in the On state and further when both Off and On states were considered, indicating sensitivity of the topological features to levodopa related gait changes. These findings support integrating TDA with machine learning to improve clinical gait analysis and aid differential diagnosis across parkinsonian disorders.

cs.LG