arXiv subjects

Jiawen Chen

Publications and source records attributed to Jiawen Chen.

At least 19 recordsLinked to original sources

arXiv2026

STHMoE: Hypergraph-Enhanced Heterogeneous Dependency Coordination for LLM-Based Urban Traffic Data Forecasting

Spatio-temporal traffic forecasting is a fundamental big data analytics task for intelligent transportation systems, where massive urban sensor streams exhibit heterogeneous, non-stationary, and structurally dynamic patterns. Although recent deep learning and large language model (LLM)-based methods have advanced traffic forecasting, they often remain temporally centered and lack effective coordination of temporal, spectral, pairwise spatial, and higher-order structural cues under evolving traffic regimes. To address this heterogeneous dependency coordination problem, we propose STHMoE, a Spatio-Temporal Hypergraph-Enhanced Mixture of Experts framework for urban traffic data forecasting. STHMoE decouples traffic dynamics into frequency-domain, time-domain, spatio-domain, and higher-order spatial representations, which are modeled by prompt-guided heterogeneous experts built upon a partially frozen LLM backbone. The first three experts leverage domain-specific statistical prompts, while the higher-order spatio expert uses a structural placeholder prompt and obtains dependency information from an adaptive hypergraph module. To capture evolving spatial structures in traffic data,, STHMoE jointly learns first-order graph dependencies and higher-order group interactions without predefined topologies. An entropy-aware MoE router with coefficient-of-variation load balancing adaptively fuses expert outputs while improving expert utilization and routing confidence. Experiments on 10 real-world traffic benchmarks show that STHMoE achieves competitive performance against temporal, spatio-temporal graph, and LLM-based baselines.

cs.AI↗

arXiv2026

Positioning manuscripts in the scientific landscape with agentic AI

Publishing a research manuscript is a routine yet demanding part of scientific life: time-consuming, stressful, and often uncertain in outcome. Recent advances in large language model (LLM)-based agentic AI have shown promise across a range of scientific tasks, and here we ask whether agentic AI can help researchers navigate the publication process itself by reliably inferring a manuscript's eventual publication venue from its content and literature context. We introduce PASS (Publication-oriented Agentic Scientific System), an agentic system that understands manuscripts within their domain-specific literature context and predicts top-matched publication venues. PASS positions each manuscript within its surrounding literature landscape by reconstructing its local scientific neighborhood, tracing its topic trajectory, and reasoning over field-specific journal spaces. Evaluated on a leakage-audited benchmark of over 2,000 preprints across 16 biomedical fields, PASS achieved Top-1 accuracy of 50.3% and Top-5 accuracy of 86.1%, outperforming state-of-the-art LLM baselines and established journal-selection tools. PASS-produced quality scores, such as impact potential and novelty, aligned with independent measures of publication outcome. We also found that the designed literature retrieval module is the strongest performance contributor, particularly for positioning manuscripts relative to nearby work, and that PASS maintained near-full performance from the abstract alone, whereas LLM baselines required the full manuscript text. An independent human evaluation found strong researcher agreement with PASS's manuscript understanding and recommendation rationale. PASS has been released as a public platform (https://ratemypaper.ai/) for broad researcher access.

cs.AI↗

arXiv2026

Large-scale spatial variable gene atlas for spatial transcriptomics

Spatial variable genes (SVGs) reveal critical information about tissue architecture, cellular interactions, and disease microenvironments. As spatial transcriptomics (ST) technologies proliferate, accurately identifying SVGs across diverse platforms, tissue types, and disease contexts has become both a major opportunity and a significant computational challenge. Here, we present a comprehensive benchmarking study of 20 state-of-the-art SVG detection methods using human slides from STimage-1K4M, a large-scale resource of ST data comprising 662 slides from more than 18 tissue types. We evaluate each method across a range of biologically and technically meaningful criteria, including recovery of pathologist-annotated domain-specific markers, cross-slide reproducibility, scalability to high-resolution data, and robustness to technical variation. Our results reveal marked differences in performance depending on tissue type, spatial resolution, and study design. Beyond benchmarking, we construct the first cross-tissue atlas of SVGs, enabling comparative analysis of spatial gene programs across cancer and normal tissues. We observe similarities between pairs of tissues that reflect developmental and functional relationships, such as high overlap between thymus and lymph node, and uncover spatial gene programs associated with metastasis, immune infiltration, and tissue-of-origin identity in cancer. Together, our work defines a framework for evaluating and interpreting spatial gene expression and establishes a reference resource for the ST community.

stat.AP↗

arXiv2026

DualHNIE: Dual-Channel Hypergraph Learning for Node Importance Estimation in Heterogeneous Knowledge Graphs

Estimating node importance in heterogeneous knowledge graphs is a fundamental problem underlying recommendation, search, and knowledge decision systems. However, most existing methods rely on pairwise message passing mechanisms that fail to capture higher-order interactions induced by meta-relational structures. Furthermore, structural topology and semantic attributes are typically entangled within a unified embedding space, which obscures their distinct inductive biases and limits the discriminative capacity of learned importance representations. To address these limitations, we propose DualHNIE, a principled dual-channel hypergraph learning framework for node importance estimation. DualHNIE first constructs a higher-order knowledge graph by forming typed hyperedges from meta-path sequences, enabling explicit modeling of higher-order relational patterns. It then introduces two complementary encoders: a structure-aware hypergraph attention network that performs locally normalized aggregation over meta-path--induced hyperedges to capture localized structural dependencies, and a sparse--chunked hypergraph transformer that captures global semantic interactions while maintaining scalable computation. We further design a contrastive alignment mechanism with auxiliary supervision, ensuring cross-view consistency while preserving modality-specific representation. Extensive experiments on multiple benchmark datasets demonstrate that DualHNIE outperforms state-of-the-art methods, validating the effectiveness of explicit high-order modeling and disentangled dual-channel representation learning for heterogeneous knowledge graphs. Code and datasets are available\footnote[1]{https://github.com/jiawenchen10/DualHNIE}.

cs.AI↗

arXiv2026

Parallax Portrait Matting

Image matting is highly ill-posed, especially when both the foreground and background are richly textured. While single-image matting methods learn strong priors from data, they often struggle on these challenging cases. Existing approaches improve results by requiring additional signals such as green screens, polarized lighting, or clean background images, but these typically rely on specialized capture setups. We present Parallax Portrait Matting, a practical two-frame matting method that uses a second image captured with slight viewpoint change. Such a setting arises naturally in burst photography, where small camera motion induces foreground-background parallax and provides complementary observations for matting. Our pipeline estimates trimaps and foreground/background motion, then constructs aligned views for prediction. To handle imperfect motion estimation, the network uses the background-aligned pair for direct fusion and the foreground-aligned cue through cross-attention for error compensation. Experiments show that our method recovers finer details and more accurate foreground colors than strong single-image matting baselines on challenging portrait cases.

cs.CV↗

arXiv2026

Weisfeiler Lehman Test on Combinatorial Complexes: Generalized Expressive Power of Topological Neural Networks

Topological neural networks have emerged as effective tools for modeling higher-order relational structures beyond pairwise graphs, including hypergraphs, simplicial complexes, and cell complexes. However, existing Weisfeiler-Leman type expressivity analyses are typically developed on different structural domains and rely on domain-specific neighborhood systems, making their expressive powers difficult to compare within a common formalism. In this paper, we introduce the Combinatorial Complex Weisfeiler-Leman (CCWL) framework, a unified expressive power refinement defined on combinatorial complexes. By exploiting the ability of combinatorial complexes to represent both set-type relations and part-whole hierarchies, CCWL performs topological color refinement through four structural neighborhoods: boundary, co-boundary, lower adjacency, and upper adjacency. We show that, under specified lifting maps, CCWL can simulate several domain-specific WL-type refinements, thereby providing a common theoretical baseline for analyzing topological message passing. We further study the neighborhood sufficiency problem and prove that, under explicit coverage conditions, a reduced refinement using only lower- and upper-adjacent bridge information preserves the distinguishing power of the full four-neighborhood CCWL refinement. Guided by this theoretical result, we instantiate the reduced refinement as the Combinatorial Complex Isomorphism Network (CCIN). Experiments on synthetic and real-world benchmarks demonstrate that CCIN achieves competitive performance against representative graph and topological neural network baselines. Ablation studies and resource-efficiency analyses further support the effectiveness of the proposed lower/upper-neighborhood design.

cs.LG↗

arXiv2026

From Uniform to Learned Graph Priors: Diffusion for Structure Discovery

Neural relational inference (NRI) methods discover interaction graphs from trajectories through variational reasoning on discrete potential edges. However, these methods typically rely on oversimplified, factorized graph priors. Such priors, typically nearing uniform distributions, treat edges as independent entities. This systemic misalignment does not match the real-world systems and yields diffuse and indecisive edge posteriors limiting the reliability of structural discovery. To address this, we propose \textit{Diff-prior}, a diffusion-parameterized adaptive prior used to calibrate latent graph distribution rather than generate graphs. Our core insight is to reframe prior integration as a learnable denoising-style calibration that organizes scattered, uncertain edge posteriors into a more reliable overall structure which can be trained by the diffusion model. Diff-prior learns an adaptive structure prior that performs structured calibration on the edge posteriors during inference, guiding it towards a distribution closer to the underlying structure. The diff-prior operates before structural sampling and acts as a denoising calibrator directly on the encoder edge distribution, which provides a generic training paradigm over structured variables. Experiments on standard benchmarks validated our framework, and the results indicate that Diff-prior improves the performance of structure inference and generates more decisive edge posteriors across multiple NRI-family architectures. The code is available on https://github.com/Hardy158118/Diffprior.

cs.LG↗

arXiv2026

Hist2Style: Histogram-Guided Stylization with Bilateral Grids

Photorealistic style transfer aims to match the color and tone of an input image to that of a style target while preserving the content and details of the original scene. Although existing large image models can facilitate these kinds of appearance edits, their high computational demands, potential for hallucinations, and limited user control make them unsuitable for high-resolution, real-time workflows. We introduce Hist2Style, a bilateral-grid formulation for fast, edge-aware stylization that preserves visual fidelity by constraining operations to locally affine transforms in bilateral space. Our model distills a large image editing model into a lightweight network by training on a large supervised corpus generated with language and vision-language models, targeting spatially varying color edits. The network conditions on a histogram-based embedding of the style target to provide an interpretable interface for adjusting the output style by modifying the target color distribution. Overall, Hist2Style maintains content structure by construction, avoids hallucinations, and supports real-time, high-resolution photorealistic stylization with interactive user-controllable color and tone adjustments.

cs.CV↗

arXiv2026

Lucky High Dynamic Range Smartphone Imaging

While the human eye can perceive an impressive twenty stops of dynamic range, smartphone camera sensors remain limited to about twelve stops despite decades of research. A variety of high dynamic range (HDR) image capture and processing techniques have been proposed, and, in practice, they can extend the dynamic range by 3-5 stops for handheld photography. This paper proposes an approach that robustly captures dynamic range using a handheld smartphone camera and lightweight networks suitable for running on mobile devices. Our method operates indirectly on linear raw pixels in bracketed exposures. Every pixel in the final HDR image is a convex combination of input pixels in the neighborhood, adjusted for exposure, and thus avoids hallucination artifacts typical of recent deep image synthesis networks. We validate our system on both synthetic imagery and unseen real bracketed images -- we confirm zero-shot generalization of the method to smartphone camera captures. Our iterative inference architecture is capable of processing an arbitrary number of bracketed input photos, and we show examples from capture stacks containing 3--9 images. Our training process relies only on synthetic captures yet generalizes to unseen real photos from several cameras. Moreover, we show that this training scheme improves other SOTA methods over their pretrained counterparts.

cs.CV↗

arXiv2026

Predicting Dynamics of Ultra-Large Complex Systems by Inferring Governing Equations

Predicting the behavior of ultra-large complex systems, from climate to biological and technological networks, is a central unsolved challenge. Existing approaches face a fundamental trade-off: equation discovery methods provide interpretability but fail to scale, while neural networks scale but operate as black boxes and often lose reliability over long times. Here, we introduce the Sparse Identification Graph Neural Network, a framework that overcome this divide by allowing to infer the governing equations of large networked systems from data. By defining symbolic discovery as edge-level information, SIGN decouples the scalability of sparse identification from network size, enabling efficient equation discovery even in large systems. SIGN allows to study networks with over 100,000 nodes while remaining robust to noise, sparse sampling, and missing data. Across diverse benchmark systems, including coupled chaotic oscillators, neural dynamics, and epidemic spreading, it recovers governing equations with high precision and sustains accurate long-term predictions. Applied to a data set of time series of temperature measurements in 71,987 sea surface positions, SIGN identifies a compact predictive network model and captures large-scale sea surface temperature conditions up to two years in advance. By enabling equation discovery at previously inaccessible scales, SIGN opens a path toward interpretable and reliable prediction of real-world complex systems.

cs.LG↗

arXiv2026

CCMamba: Topologically-Informed Selective State-Space Networks on Combinatorial Complexes for Higher-Order Graph Learning

Topological deep learning has emerged as a powerful paradigm for modeling higher-order relational structures beyond pairwise interactions that standard graph neural networks fail to capture. While combinatorial complexes (CCs) offer a unified topological foundation for the higher-order graph learning, existing topological deep learning methods rely heavily on local message passing and attention mechanisms. These suffer from quadratic complexity and local neighborhood constraints, limiting their scalability and capacity for rank-aware, long-range dependency modeling. To overcome these challenges, we propose Combinatorial Complex Mamba (CCMamba), the first unified Mamba-based neural framework for learning on combinatorial complexes. CCMamba reformulates higher-order message passing as a selective state-space modeling problem by linearizing multi-rank incidence relations into structured, rank-aware sequences. This architecture enables adaptive, directional, and long-range information propagation in linear time bypassing the scalability bottlenecks of self-attention. Theoretically, we further establish that the expressive power of CCMamba is upper-bounded by the 1-dimensional combinatorial complex Weisfeiler-Lehman (1-CCWL) test. Extensive experiments across graph, hypergraph, and simplicial benchmarks demonstrate that CCMamba consistently outperforms existing methods while exhibiting superior scalability and remarkable robustness against over-smoothing in deep architectures.

cs.LG↗

arXiv2026

Onsager vortex clusters on a sphere

We study Onsager vortex clustered states in a shell-shaped superfluid containing a large number of quantum vortices. In the incompressible limit and at low temperatures, the relevant problem can be boiled down to the statistical mechanics of neutral point vortices confined on a sphere. We analyze rotation free vortex clustered states within the mean field theory in the microcanonical ensemble. We find that the sandwich state, which involves the separating of vortices with opposite circulation and the clustering of vortices with the same circulation around the poles and the equator, is the maximum entropy vortex distribution, subject to zero angular momentum constraint. The dipole momentum vanishes for the sandwich state and the quadrupole tensor serves as an order parameter to characterize the vortex cluster structure. For given finite angular momentum, the equilibrium vortex distribution forms a dipole structure, i.e., vortices with opposite sign are separated and are accumulated around the south and north pole, respectively. The conditions for the onset of clustering, and the exponents associated with the quadrupole moment and the dipole moment as functions of energy, are obtained within the mean field theory. At large energies, we obtain asymptotically exact vortex density distributions using the stereographic projection method, giving rise to the parameter bounds for the vortex clustered states. The analytical predictions are in excellent agreement with microcanonical Monte Carlo simulations.

cond-mat.quant-gas↗

arXiv2025

Contrastive Dimension Reduction: A Systematic Review

Contrastive dimension reduction (CDR) methods aim to extract signal unique to or enriched in a treatment (foreground) group relative to a control (background) group. This setting arises in many scientific domains, such as genomics, imaging, and time series analysis, where traditional dimension reduction techniques such as Principal Component Analysis (PCA) may fail to isolate the signal of interest. In this review, we provide a systematic overview of existing CDR methods. We propose a pipeline for analyzing case-control studies together with a taxonomy of CDR methods based on their assumptions, objectives, and mathematical formulations, unifying disparate approaches under a shared conceptual framework. We highlight key applications and challenges in existing CDR methods, and identify open questions and future directions. By providing a clear framework for CDR and its applications, we aim to facilitate broader adoption and motivate further developments in this emerging field.

stat.ME↗

arXiv2025

Critical Nodes Identification in Complex Networks: A Survey

Complex networks have become essential tools for understanding diverse phenomena in social systems, traffic systems, biomolecular systems, and financial systems. Identifying critical nodes is a central theme in contemporary research, serving as a vital bridge between theoretical foundations and practical applications. Nevertheless, the intrinsic complexity and structural heterogeneity characterizing real-world networks, with particular emphasis on dynamic and higher-order networks, present substantial obstacles to the development of universal frameworks for critical node identification. This paper provides a comprehensive review of critical node identification techniques, categorizing them into seven main classes: centrality, critical nodes deletion problem, influence maximization, network control, artificial intelligence, higher-order and dynamic methods. Our review bridges the gaps in existing surveys by systematically classifying methods based on their methodological foundations and practical implications, and by highlighting their strengths, limitations, and applicability across different network types. Our work enhances the understanding of critical node research by identifying key challenges, such as algorithmic universality, real-time evaluation in dynamic networks, analysis of higher-order structures, and computational efficiency in large-scale networks. The structured synthesis consolidates current progress and highlights open questions, particularly in modeling temporal dynamics, advancing efficient algorithms, integrating machine learning approaches, and developing scalable and interpretable metrics for complex systems.

cs.SI↗

arXiv2025

The Nearest-Neighbor Derivative Process: Modeling Spatial Rates of Change in Massive Datasets

Gaussian processes (GPs) are instrumental in modeling spatial processes, offering precise interpolation and prediction capabilities across fields such as environmental science and biology. Recently, there has been growing interest in extending GPs to infer spatial derivatives, which are vital for analyzing spatial dynamics and detecting subtle changes in data patterns. Despite their utility, traditional GPs suffer from computational inefficiencies, due to the cubic scaling with the number of spatial locations. Fortunately, the computational challenge has spurred extensive research on scalable GP methods. However, these scalable approaches do not directly accommodate the inference of derivative processes. A straightforward approach is to use scalable GP models followed by finite-difference methods, known as the plug-in estimator. This approach, while intuitive, suffers from sensitivity to parameter choices, and the approximate gradient may not be a valid GP, leading to compromised inference. To bridge this gap, we introduce the Nearest-Neighbor Derivative Process (NNDP), an innovative framework that models the spatial processes and their derivatives within a single scalable GP model. NNDP significantly reduces the computational time complexity from $O(n^3)$ to $O(n)$, making it feasible for large datasets. We provide various theoretical supports for NNDP and demonstrate its effectiveness through extensive simulations and real data analysis.

stat.ME↗

arXiv2025

Hierarchical Vision-Language Reasoning for Multimodal Multiple-Choice Question Answering

Multimodal Large Language Models (MLLMs) have demonstrated remarkable multimodal understanding capabilities in Visual Question Answering (VQA) tasks by integrating visual and textual features. However, under the challenging ten-choice question evaluation paradigm, existing methods still exhibit significant limitations when processing PDF documents with complex layouts and lengthy content. Notably, current mainstream models suffer from a strong bias toward English training data, resulting in suboptimal performance for Japanese and other language scenarios. To address these challenges, this paper proposes a novel Japanese PDF document understanding framework that combines multimodal hierarchical reasoning mechanisms with Colqwen-optimized retrieval methods, while innovatively introducing a semantic verification strategy through sub-question decomposition. Experimental results demonstrate that our framework not only significantly enhances the model's deep semantic parsing capability for complex documents, but also exhibits superior robustness in practical application scenarios.

cs.IR↗

arXiv2025

Learning Lens Blur Fields

Optical blur is an inherent property of any lens system and is challenging to model in modern cameras because of their complex optical elements. To tackle this challenge, we introduce a high-dimensional neural representation of blur$-$$\textit{the lens blur field}$$-$and a practical method for acquiring it. The lens blur field is a multilayer perceptron (MLP) designed to (1) accurately capture variations of the lens 2D point spread function over image plane location, focus setting and, optionally, depth and (2) represent these variations parametrically as a single, sensor-specific function. The representation models the combined effects of defocus, diffraction, aberration, and accounts for sensor features such as pixel color filters and pixel-specific micro-lenses. To learn the real-world blur field of a given device, we formulate a generalized non-blind deconvolution problem that directly optimizes the MLP weights using a small set of focal stacks as the only input. We also provide a first-of-its-kind dataset of 5D blur fields$-$for smartphone cameras, camera bodies equipped with a variety of lenses, etc. Lastly, we show that acquired 5D blur fields are expressive and accurate enough to reveal, for the first time, differences in optical behavior of smartphone devices of the same make and model. Code and data can be found at blur-fields.github.io.

eess.IV↗

arXiv2025

Decoupling Spatio-Temporal Prediction: When Lightweight Large Models Meet Adaptive Hypergraphs

Spatio-temporal prediction is a pivotal task with broad applications in traffic management, climate monitoring, energy scheduling, etc. However, existing methodologies often struggle to balance model expressiveness and computational efficiency, especially when scaling to large real-world datasets. To tackle these challenges, we propose STH-SepNet (Spatio-Temporal Hypergraph Separation Networks), a novel framework that decouples temporal and spatial modeling to enhance both efficiency and precision. Therein, the temporal dimension is modeled using lightweight large language models, which effectively capture low-rank temporal dynamics. Concurrently, the spatial dimension is addressed through an adaptive hypergraph neural network, which dynamically constructs hyperedges to model intricate, higher-order interactions. A carefully designed gating mechanism is integrated to seamlessly fuse temporal and spatial representations. By leveraging the fundamental principles of low-rank temporal dynamics and spatial interactions, STH-SepNet offers a pragmatic and scalable solution for spatio-temporal prediction in real-world applications. Extensive experiments on large-scale real-world datasets across multiple benchmarks demonstrate the effectiveness of STH-SepNet in boosting predictive performance while maintaining computational efficiency. This work may provide a promising lightweight framework for spatio-temporal prediction, aiming to reduce computational demands and while enhancing predictive performance. Our code is avaliable at https://github.com/SEU-WENJIA/ST-SepNet-Lightweight-LLMs-Meet-Adaptive-Hypergraphs.

cs.LG↗