arXiv subjects

Jie Pan

Publications and source records attributed to Jie Pan.

At least 19 recordsLinked to original sources

arXiv2026

Efficient quantum state preparation on Quantinuum hardware

Preparation and verification of specific quantum states is an important capability for quantum devices to realise advantages over classical computations and algorithms. In this work, we have demonstrated an end-to-end framework that combines resource-efficient quantum state preparation with rapid, robust fidelity verification on near-term quantum hardware. By experimentally preparing and validating a structured complex quantum state encoding a digitized acoustic signal on the Quantinuum H2-1 trapped-ion platform, we achieved a high hardware fidelity of $F_{\mathrm{hw}} = 0.929$. Crucially, this milestone was realized without relying on idealized assumptions or deep fault-tolerant overhead, but rather through resource-minimal circuits optimized for NISQ-era and early fault-tolerant devices. Furthermore, we addressed a key limitation in current quantum state certification. While validation methods like shadow overlap work well for random states, their sample complexity can become prohibitively high for the structured states used in practical algorithms. We mitigate this by introducing a pre-measurement basis-change technique that reduces the verification parameter, $\tau$, by over 10 orders of magnitude for structured targets. This approach tightens the theoretical certification guarantees of the shadow overlap method and integrates tensor-network preparation and shadow validation into a unified workflow. These results shift the paradigm of how structured classical data can be mapped to and verified on quantum hardware under realistic noise and measurement budgets. By compressing a robust verification procedure to just 1,000 measurement shots, this framework offers an immediate, scalable benchmarking standard.

quant-ph↗

arXiv2026

Stage-Aware and Roughness-Constrained Diffusion Policy for Multi-Stage Robotic Polishing

Polishing is a critical finishing process in high-end manufacturing fields such as aerospace, where surface quality directly affects the service performance and reliability of components. Robotic imitation learning provides a flexible solution for such tasks, but current methods remain limited in industrial polishing because of long-horizon dependencies, uncertain stage transitions, and the difficulty of modeling and regulating coupled process parameters. To address these issues, this paper proposes a Stage-Aware and Roughness-Constrained Diffusion Policy (SRDP) for robotic polishing. SRDP infers the process-stage posterior from multimodal observation histories and uses it to condition the shared reverse denoising process, enabling stage-consistent action generation without external stage labels during execution. Furthermore, a roughness-oriented process-constrained diffusion sampling method is incorporated to generate constrained feed speed and normal contact force under stage-wise preset spindle speeds, thereby improving process consistency and physical feasibility. Systematic experiments are conducted on two representative scenarios, namely spacecraft cabin coating-surface polishing and inner-cavity structural surface finishing. Comparisons with advanced baselines, ablation studies, and real-robot validations comprehensively evaluate the proposed method. The results show that SRD improves stage-transition stability, process-parameter consistency, and final surface quality across different polishing scenarios.

cs.RO↗

arXiv2026

Surface Constraint Policy for Learning Surface-Constrained and Dynamically Feasible Robot Skills

Diffusion-based imitation learning methods have driven rapid progress in robot dexterous manipulation tasks. However, they have limitations when applied to tasks that involve complex free-form surface constraints because of their lack of explicit surface geometry constraint modeling and the dynamic feasibility issue, resulting in stochastic action generation that fails to achieve reliable surface alignment and maintain stable contact. To address these limitations, we propose a novel surface constraint policy (SCP) for generating robot actions that satisfy free-form surface constraints on the basis of human demonstrations and real-time visual observations. First, the surface geometry constraint is encoded using a two-dimensional weighted Gaussian kernel function that is derived from demonstrations. Building on the encoded surface geometry constraints, the diffusion-based policy is used to infer task-level action intentions from multimodal sensory inputs, including visual observations and robot state feedback. These intentions are further transformed into surface-constrained dynamic movement primitives (DMPs) through a similarity-based action mapping method, thereby enabling smooth and compliant motion execution. The SCP achieves generation of structured surface geometric intent and dynamically admissible actions. The proposed method is validated on multiple surface manipulation tasks and compared with existing techniques. The experimental results demonstrate superior task success rates and contact stability under surface constraints.

cs.RO↗

arXiv2026

DataShield: Safety-degrading Data Filtering for LLM Benign Instruction Fine-Tuning

Large language models (LLMs) suffer from degraded safety capabilities even when fine-tuned with benign datasets. However, existing methods for identifying safety-degrading samples in benign datasets suffer from high computational costs and significant noise issues. In this paper, we propose DataShield to efficiently and effectively identify potential safety-degrading samples. Our key intuition is based on the observation that benign fine-tuning increases the overall response compliance of LLMs. DataShield's key technical insight is to quantify each sample's contribution to the model's compliance behavior as its safety degradation score. DataShield consists of three core components: (1) Compliance Vector Extraction, which captures the LLM's compliance behavior tendency; (2) a novel Compliance-Aware Score (CAS), which automatically identifies the optimal safety-critical layer; and (3) Safety-degrading Sample Filtering, which quantifies the projection shift of training data along the compliance direction. Extensive experimental evaluation on Llama3-8B, Llama3.1-8B, and Qwen2.5-7B using the Alpaca and Dolly benign datasets validates our method's effectiveness in identifying high-risk and low-risk data subsets. We also observe that open-ended question answering is more likely to trigger safety degradation, and corresponding responses tend to be longer. We hope this work can provide new insights into data-centric defense methods. The source code is available at: https://github.com/ZJunBo/DataShield.

cs.CR↗

arXiv2025

Topological Valley Transport in Bilayer Graphene Induced by Interlayer Sliding

Interlayer sliding, together with twist angle, is a crucial parameter that defines the atomic registry and thus determines the properties of two-dimensional (2D) material homobilayers. Here, we theoretically demonstrate that controlled interlayer sliding in bilayer graphene induces Berry curvature reversals, leading to topological states confined within a one-dimensional moir\'e channel. We experimentally realize interlayer sliding by bending the bilayer graphene geometry across a nanoridge. Systematic electronic transport measurements reveal topological valley transport when the Fermi energy resides within the band gap, consistent with theoretical predictions of eight topological channels. Our findings establish interlayer sliding as a powerful tool for tuning the electronic properties of bilayer graphene and underscore its potential for broad application across 2D material systems.

cond-mat.mes-hall↗

arXiv2025

Mutations of quivers with 2-cycles

We develop a mutation theory for quivers with oriented 2-cycles using a structure called a homotopy, defined as a normal subgroupoid of the quiver's fundamental groupoid. This framework extends Fomin-Zelevinsky mutations of 2-acyclic quivers and yields involutive mutations that preserve the fundamental groupoid quotient by the homotopy. It generalizes orbit mutations arising from quiver coverings and allows for infinite mutation sequences even when orbit mutations are obstructed. We further construct quivers with homotopies from triangulations of marked surfaces with colored punctures, and prove that flips correspond to mutations, extending the Fomin-Shapiro-Thurston model to the setting with 2-cycles.

math.CO↗

arXiv2025

HCOMC: A Hierarchical Cooperative On-Ramp Merging Control Framework in Mixed Traffic Environment on Two-Lane Highways

Highway on-ramp merging areas are common bottlenecks to traffic congestion and accidents. Currently, a cooperative control strategy based on connected and automated vehicles (CAVs) is a fundamental solution to this problem. While CAVs are not fully widespread, it is necessary to propose a hierarchical cooperative on-ramp merging control (HCOMC) framework for heterogeneous traffic flow on two-lane highways to address this gap. This paper extends longitudinal car-following models based on the intelligent driver model and lateral lane-changing models using the quintic polynomial curve to account for human-driven vehicles (HDVs) and CAVs, comprehensively considering human factors and cooperative adaptive cruise control. Besides, this paper proposes a HCOMC framework, consisting of a hierarchical cooperative planning model based on the modified virtual vehicle model, a discretionary lane-changing model based on game theory, and a multi-objective optimization model using the elitist non-dominated sorting genetic algorithm to ensure the safe, smooth, and efficient merging process. Then, the performance of our HCOMC is analyzed under different traffic densities and CAV penetration rates through simulation. The findings underscore our HCOMC's pronounced comprehensive advantages in enhancing the safety of group vehicles, stabilizing and expediting merging process, optimizing traffic efficiency, and economizing fuel consumption compared with benchmarks.

cs.RO↗

arXiv2025

TGLD: A Trust-Aware Game-Theoretic Lane-Changing Decision Framework for Automated Vehicles in Heterogeneous Traffic

Automated vehicles (AVs) face a critical need to adopt socially compatible behaviors and cooperate effectively with human-driven vehicles (HVs) in heterogeneous traffic environment. However, most existing lane-changing frameworks overlook HVs' dynamic trust levels, limiting their ability to accurately predict human driver behaviors. To address this gap, this study proposes a trust-aware game-theoretic lane-changing decision (TGLD) framework. First, we formulate a multi-vehicle coalition game, incorporating fully cooperative interactions among AVs and partially cooperative behaviors from HVs informed by real-time trust evaluations. Second, we develop an online trust evaluation method to dynamically estimate HVs' trust levels during lane-changing interactions, guiding AVs to select context-appropriate cooperative maneuvers. Lastly, social compatibility objectives are considered by minimizing disruption to surrounding vehicles and enhancing the predictability of AV behaviors, thereby ensuring human-friendly and context-adaptive lane-changing strategies. A human-in-the-loop experiment conducted in a highway on-ramp merging scenario validates our TGLD approach. Results show that AVs can effectively adjust strategies according to different HVs' trust levels and driving styles. Moreover, incorporating a trust mechanism significantly improves lane-changing efficiency, maintains safety, and contributes to transparent and adaptive AV-HV interactions.

cs.RO↗

arXiv2025

Trust-MARL: Trust-Based Multi-Agent Reinforcement Learning Framework for Cooperative On-Ramp Merging Control in Heterogeneous Traffic Flow

Intelligent transportation systems require connected and automated vehicles (CAVs) to conduct safe and efficient cooperation with human-driven vehicles (HVs) in complex real-world traffic environments. However, the inherent unpredictability of human behaviour, especially at bottlenecks such as highway on-ramp merging areas, often disrupts traffic flow and compromises system performance. To address the challenge of cooperative on-ramp merging in heterogeneous traffic environments, this study proposes a trust-based multi-agent reinforcement learning (Trust-MARL) framework. At the macro level, Trust-MARL enhances global traffic efficiency by leveraging inter-agent trust to improve bottleneck throughput and mitigate traffic shockwave through emergent group-level coordination. At the micro level, a dynamic trust mechanism is designed to enable CAVs to adjust their cooperative strategies in response to real-time behaviors and historical interactions with both HVs and other CAVs. Furthermore, a trust-triggered game-theoretic decision-making module is integrated to guide each CAV in adapting its cooperation factor and executing context-aware lane-changing decisions under safety, comfort, and efficiency constraints. An extensive set of ablation studies and comparative experiments validates the effectiveness of the proposed Trust-MARL approach, demonstrating significant improvements in safety, efficiency, comfort, and adaptability across varying CAV penetration rates and traffic densities.

cs.MA↗

arXiv2025

Assessing Validity of ICD-10 Administrative Data in Coding Comorbidities

Objectives: Administrative data is commonly used to inform chronic disease prevalence and support health informatics research. This study assessed the validity of coding comorbidity in the International Classification of Diseases, 10th Revision (ICD-10) administrative data. Methods: We analyzed three chart review cohorts (4,008 patients in 2003, 3,045 in 2015, and 9,024 in 2022) in Alberta, Canada. Nurse reviewers assessed the presence of 17 clinical conditions using a consistent protocol. The reviews were linked with administrative data using unique identifiers. We compared the accuracy in coding comorbidity by ICD-10, using chart review data as the reference standard. Results: Our findings showed that the mean difference in prevalence between chart reviews and ICD-10 for these 17 conditions was 2.1% in 2003, 7.6% in 2015, and 6.3% in 2022. Some conditions were relatively stable, such as diabetes (1.9%, 2.1%, and 1.1%) and metastatic cancer (0.3%, 1.1%, and 0.4%). For these 17 conditions, the sensitivity ranged from 39.6-85.1% in 2003, 1.3-85.2% in 2015, and 3.0-89.7% in 2022. The C-statistics for predicting in-hospital mortality using comorbidities by ICD-10 were 0.84 in 2003, 0.81 in 2015, and 0.78 in 2022. Discussion: The under-coding could be primarily due to the increase of hospital patient volumes and the limited time allocated to coders. There is a potential to develop artificial intelligence methods based on electronic health records to support coding practices and improve coding quality. Conclusion: Comorbidities were increasingly under-coded over 20 years. The validity of ICD-10 decreased but remained relatively stable for certain conditions mandated for coding. The under-coding exerted minimal impact on in-hospital mortality prediction.

q-bio.QM↗

arXiv2025

Integrating Large Language Models with Human Expertise for Disease Detection in Electronic Health Records

Objective: Electronic health records (EHR) are widely available to complement administrative data-based disease surveillance and healthcare performance evaluation. Defining conditions from EHR is labour-intensive and requires extensive manual labelling of disease outcomes. This study developed an efficient strategy based on advanced large language models to identify multiple conditions from EHR clinical notes. Methods: We linked a cardiac registry cohort in 2015 with an EHR system in Alberta, Canada. We developed a pipeline that leveraged a generative large language model (LLM) to analyze, understand, and interpret EHR notes by prompts based on specific diagnosis, treatment management, and clinical guidelines. The pipeline was applied to detect acute myocardial infarction (AMI), diabetes, and hypertension. The performance was compared against clinician-validated diagnoses as the reference standard and widely adopted International Classification of Diseases (ICD) codes-based methods. Results: The study cohort accounted for 3,088 patients and 551,095 clinical notes. The prevalence was 55.4%, 27.7%, 65.9% and for AMI, diabetes, and hypertension, respectively. The performance of the LLM-based pipeline for detecting conditions varied: AMI had 88% sensitivity, 63% specificity, and 77% positive predictive value (PPV); diabetes had 91% sensitivity, 86% specificity, and 71% PPV; and hypertension had 94% sensitivity, 32% specificity, and 72% PPV. Compared with ICD codes, the LLM-based method demonstrated improved sensitivity and negative predictive value across all conditions. The monthly percentage trends from the detected cases by LLM and reference standard showed consistent patterns.

cs.CL↗

arXiv2025

Machine learning for modelling unstructured grid data in computational physics: a review

Unstructured grid data are essential for modelling complex geometries and dynamics in computational physics. Yet, their inherent irregularity presents significant challenges for conventional machine learning (ML) techniques. This paper provides a comprehensive review of advanced ML methodologies designed to handle unstructured grid data in high-dimensional dynamical systems. Key approaches discussed include graph neural networks, transformer models with spatial attention mechanisms, interpolation-integrated ML methods, and meshless techniques such as physics-informed neural networks. These methodologies have proven effective across diverse fields, including fluid dynamics and environmental simulations. This review is intended as a guidebook for computational scientists seeking to apply ML approaches to unstructured grid data in their domains, as well as for ML researchers looking to address challenges in computational physics. It places special focus on how ML methods can overcome the inherent limitations of traditional numerical techniques and, conversely, how insights from computational physics can inform ML development. To support benchmarking, this review also provides a summary of open-access datasets of unstructured grid data in computational physics. Finally, emerging directions such as generative models with unstructured data, reinforcement learning for mesh generation, and hybrid physics-data-driven paradigms are discussed to inspire future advancements in this evolving field.

cs.LG↗

arXiv2025

Graph Structure Learning for Tumor Microenvironment with Cell Type Annotation from non-spatial scRNA-seq data

The exploration of cellular heterogeneity within the tumor microenvironment (TME) via single-cell RNA sequencing (scRNA-seq) is essential for understanding cancer progression and response to therapy. Current scRNA-seq approaches, however, lack spatial context and rely on incomplete datasets of ligand-receptor interactions (LRIs), limiting accurate cell type annotation and cell-cell communication (CCC) inference. This study addresses these challenges using a novel graph neural network (GNN) model that enhances cell type prediction and cell interaction analysis. Our study utilized a dataset consisting of 49,020 cells from 19 patients across three cancer types: Leukemia, Breast Invasive Carcinoma, and Colorectal Cancer. The proposed scGSL model demonstrated robust performance, achieving an average accuracy of 84.83%, precision of 86.23%, recall of 81.51%, and an F1 score of 80.92% across all datasets. These metrics represent a significant enhancement over existing methods, which typically exhibit lower performance metrics. Additionally, by reviewing existing literature on gene interactions within the TME, the scGSL model proves to robustly identify biologically meaningful gene interactions in an unsupervised manner, validated by significant expression differences in key gene pairs across various cancers. The source code and data used in this paper can be found in https://github.com/LiYuechao1998/scGSL.

q-bio.GN↗

arXiv2025

Bias voltage controlled inversions of tunneling magnetoresistance in van der Waals heterostructures Fe3GaTe2/hBN/Fe3GaTe2

We report the bias voltage controlled inversions of tunneling magnetoresistance (TMR) in magnetic tunnel junctions composed of Fe3GaTe2 electrodes and hBN tunneling barrier, observed at room temperature. The polarity reversal of TMR occurs consistently at around 0.625 V across multiple devices and temperatures, highlighting the robustness of the effect. To understand this behavior, we developed a theoretical model incorporating spin-resolved density of states (DOS) at high energy levels. By adjusting the DOS weighting at different k points to account for misalignment between the crystal structure of electrodes in experimental devices, we improved agreement between experimental and theoretical inversion voltages. Our results provide valuable insight into the voltage-controlled spin injection and detection in two-dimensional magnetic tunnel junctions, with implications for the development of energy-efficient spintronic devices.

cond-mat.mes-hall↗

arXiv2024

Inducing Berry Curvature Dipole in Multilayer Graphene through Inhomogeneous Interlayer Sliding

Breaking lattice symmetry is crucial for generating a nonzero Berry curvature. While manipulating twisting angles between adjacent layers has successfully broken lattice symmetry through strain field and generated nonzero Berry curvature, interlayer sliding in principle offers a promising alternative route. However, realizing uniform interlayer sliding faces experimental challenges due to its energetic instability. In this work, we introduce an experimentally feasible method, using a corrugated substrate to induce an inhomogeneous but energetically more stable interlayer sliding in multilayer graphene. Our simulations demonstrate that inhomogeneous interlayer sliding produces a sizable Berry curvature dipole, which can be further tuned by varying the interlayer sliding distances and potential differences. The resulting Berry curvature dipole magnitude is remarkably up to 100 times greater than the maximum displacement involved in the inhomogeneous sliding. Our results highlight inhomogeneous interlayer sliding as a viable and effective method to induce a significant Berry curvature dipole in graphene systems and propose the experimentally feasible way to realize it.

cond-mat.mes-hall↗

arXiv2024

Bias Voltage Driven Tunneling Magnetoresistance Polarity Reversal in 2D Stripy Antiferromagnet CrOCl

Atomically thin materials with coupled magnetic and electric polarization are critical for developing energy-efficient and high-density spintronic devices, yet they remain scarce due to often conflicting requirements of stabilizing both magnetic and electric orders. The recent discovery of the magnetoelectric effect in the 2D stripy antiferromagnet CrOCl highlights this semiconductor as a promising platform to explore electric field effects on magnetoresistance. In this study, we systematically investigate the magnetoresistance in tunneling junctions of bilayer and monolayer CrOCl. We observe that the transition from antiferromagnetic to ferrimagnetic phases in both cases induces a positive magnetoresistance at low bias voltages, which reverses to a negative value at higher bias voltages. This polarity reversal is attributed to the additional electric dipoles present in the antiferromagnetic state, as supported by our theoretical calculations. These findings suggest a pathway for the electric control of spintronic devices and underscore the potential of 2D magnets like CrOCl in advancing energy-efficient spintronic applications.

cond-mat.mes-hall↗

arXiv2024

Magnetoresistance oscillations in vertical junctions of 2D antiferromagnetic semiconductor CrPS$_4$

Magnetoresistance (MR) oscillations serve as a hallmark of intrinsic quantum behavior, traditionally observed only in conducting systems. Here we report the discovery of MR oscillations in an insulating system, the vertical junctions of CrPS$_4$ which is a two dimensional (2D) A-type antiferromagnetic semiconductor. Systematic investigations of MR peaks under varying conditions, including electrode materials, magnetic field direction, temperature, voltage bias and layer number, elucidate a correlation between MR oscillations and spin-canted states in CrPS$_4$. Experimental data and analysis point out the important role of the in-gap electronic states in generating MR oscillations, and we proposed that spin selected interlayer hopping of localized defect states may be responsible for it. Our findings not only illuminate the unusual electronic transport in CrPS$_4$ but also underscore the potential of van der Waals magnets for exploring interesting phenomena.

cond-mat.mes-hall↗

arXiv2024

Conjugation of reddening sequences and conjugation difference

We describe the conjugation of the reddening sequence according to the formula of $c$-vectors with respect to changing the initial seed. As applications, we extend the Rotation Lemma, the Target before Source Theorem, and the mutation invariant property of the existence of reddening sequences to totally sign-skew-symmetric cluster algebras. Furthermore, this also leads to the construction of conjugation difference which characterizes the number of red mutations a maximal green sequence should admit in any matrix pattern with the initial seed changed via mutations.

math.CO↗