arXiv subjects

Jieyu Zhang

Publications and source records attributed to Jieyu Zhang.

At least 55 records · Page 3Linked to original sources

arXiv2024

EHRAgent: Code Empowers Large Language Models for Few-shot Complex Tabular Reasoning on Electronic Health Records

Large language models (LLMs) have demonstrated exceptional capabilities in planning and tool utilization as autonomous agents, but few have been developed for medical problem-solving. We propose EHRAgent, an LLM agent empowered with a code interface, to autonomously generate and execute code for multi-tabular reasoning within electronic health records (EHRs). First, we formulate an EHR question-answering task into a tool-use planning process, efficiently decomposing a complicated task into a sequence of manageable actions. By integrating interactive coding and execution feedback, EHRAgent learns from error messages and improves the originally generated code through iterations. Furthermore, we enhance the LLM agent by incorporating long-term memory, which allows EHRAgent to effectively select and build upon the most relevant successful cases from past experiences. Experiments on three real-world multi-tabular EHR datasets show that EHRAgent outperforms the strongest baseline by up to 29.6% in success rate. EHRAgent leverages the emerging few-shot learning capabilities of LLMs, enabling autonomous code generation and execution to tackle complex clinical tasks with minimal demonstrations.

cs.CL↗

arXiv2024

m&m's: A Benchmark to Evaluate Tool-Use for multi-step multi-modal Tasks

Real-world multi-modal problems are rarely solved by a single machine learning model, and often require multi-step computational plans that involve stitching several models. Tool-augmented LLMs hold tremendous promise for automating the generation of such computational plans. However, the lack of standardized benchmarks for evaluating LLMs as planners for multi-step multi-modal tasks has prevented a systematic study of planner design decisions. Should LLMs generate a full plan in a single shot or step-by-step? Should they invoke tools directly with Python code or through structured data formats like JSON? Does feedback improve planning? To answer these questions and more, we introduce m&m's: a benchmark containing 4K+ multi-step multi-modal tasks involving 33 tools that include multi-modal models, (free) public APIs, and image processing modules. For each of these task queries, we provide automatically generated plans using this realistic toolset. We further provide a high-quality subset of 1,565 task plans that are human-verified and correctly executable. With m&m's, we evaluate 10 popular LLMs with 2 planning strategies (multi-step vs. step-by-step planning), 2 plan formats (JSON vs. code), and 3 types of feedback (parsing/verification/execution). Finally, we summarize takeaways from our extensive experiments. Our dataset and code are available on HuggingFace (https://huggingface.co/datasets/zixianma/mnms) and Github (https://github.com/RAIVNLab/mnms).

cs.CV↗

arXiv2024

Offline Training of Language Model Agents with Functions as Learnable Weights

Researchers and practitioners have recently reframed powerful Large Language Models (LLMs) as agents, enabling them to automate complex tasks largely via the use of specialized functions. To facilitate the development of LLM agents, we present a novel paradigm of training LLM agents without modifying the LLM weights, which is particularly useful when the LLMs are difficult or inaccessible for modifications. Inspired by how humans continuously forge tools to adapt to real-world tasks, rather than change our biological structure to fit a static set of tools, we propose to progressively forge agent's functions to better solve the downstream tasks instead of modifying the LLM weights. By treating the functions as learnable `agent parameters' and leveraging the fundamental idea of model training in artificial intelligence, we develop AgentOptimizer that employs the LLM to update agents' functions and devise an agent training algorithm with two strategies, roll-back, and early-stop, to streamline the training process. With extensive experiments, we showcase that the agent training paradigm could significantly improve the performance of representative LLM agents in various downstream tasks. We also study the behavior of the agent training regarding aspects like the learning curve and domain transferability.

cs.AI↗

arXiv2024

Biomedical Visual Instruction Tuning with Clinician Preference Alignment

Recent advancements in multimodal foundation models have showcased impressive capabilities in understanding and reasoning with visual and textual information. Adapting these foundation models trained for general usage to specialized domains like biomedicine requires large-scale domain-specific instruction datasets. While existing works have explored curating such datasets automatically, the resultant datasets are not explicitly aligned with domain expertise. In this work, we propose a data-centric framework, Biomedical Visual Instruction Tuning with Clinician Preference Alignment (BioMed-VITAL), that incorporates clinician preferences into both stages of generating and selecting instruction data for tuning biomedical multimodal foundation models. First, during the generation stage, we prompt the GPT-4V generator with a diverse set of clinician-selected demonstrations for preference-aligned data candidate generation. Then, during the selection phase, we train a separate selection model, which explicitly distills clinician and policy-guided model preferences into a rating function to select high-quality data for medical instruction tuning. Results show that the model tuned with the instruction-following data from our method demonstrates a significant improvement in open visual chat (18.5% relatively) and medical VQA (win rate up to 81.73%). Our instruction-following data and models are available at BioMed-VITAL.github.io.

cs.CV↗

arXiv2024

SciBench: Evaluating College-Level Scientific Problem-Solving Abilities of Large Language Models

Most of the existing Large Language Model (LLM) benchmarks on scientific problem reasoning focus on problems grounded in high-school subjects and are confined to elementary algebraic operations. To systematically examine the reasoning capabilities required for solving complex scientific problems, we introduce an expansive benchmark suite SciBench for LLMs. SciBench contains a carefully curated dataset featuring a range of collegiate-level scientific problems from mathematics, chemistry, and physics domains. Based on the dataset, we conduct an in-depth benchmarking study of representative open-source and proprietary LLMs with various prompting strategies. The results reveal that the current LLMs fall short of delivering satisfactory performance, with the best overall score of merely 43.22%. Furthermore, through a detailed user study, we categorize the errors made by LLMs into ten problem-solving abilities. Our analysis indicates that no single prompting strategy significantly outperforms the others and some strategies that demonstrate improvements in certain problem-solving skills could result in declines in other skills. We envision that SciBench will catalyze further developments in the reasoning abilities of LLMs, thereby ultimately contributing to scientific research and discovery.

cs.CL↗

arXiv2024

Iterated Learning Improves Compositionality in Large Vision-Language Models

A fundamental characteristic common to both human vision and natural language is their compositional nature. Yet, despite the performance gains contributed by large vision and language pretraining, recent investigations find that most-if not all-our state-of-the-art vision-language models struggle at compositionality. They are unable to distinguish between images of " a girl in white facing a man in black" and "a girl in black facing a man in white". Moreover, prior work suggests that compositionality doesn't arise with scale: larger model sizes or training data don't help. This paper develops a new iterated training algorithm that incentivizes compositionality. We draw on decades of cognitive science research that identifies cultural transmission-the need to teach a new generation-as a necessary inductive prior that incentivizes humans to develop compositional languages. Specifically, we reframe vision-language contrastive learning as the Lewis Signaling Game between a vision agent and a language agent, and operationalize cultural transmission by iteratively resetting one of the agent's weights during training. After every iteration, this training paradigm induces representations that become "easier to learn", a property of compositional languages: e.g. our model trained on CC3M and CC12M improves standard CLIP by 4.7%, 4.0% respectfully in the SugarCrepe benchmark.

cs.CV↗

arXiv2024

LLMs-based Few-Shot Disease Predictions using EHR: A Novel Approach Combining Predictive Agent Reasoning and Critical Agent Instruction

Electronic health records (EHRs) contain valuable patient data for health-related prediction tasks, such as disease prediction. Traditional approaches rely on supervised learning methods that require large labeled datasets, which can be expensive and challenging to obtain. In this study, we investigate the feasibility of applying Large Language Models (LLMs) to convert structured patient visit data (e.g., diagnoses, labs, prescriptions) into natural language narratives. We evaluate the zero-shot and few-shot performance of LLMs using various EHR-prediction-oriented prompting strategies. Furthermore, we propose a novel approach that utilizes LLM agents with different roles: a predictor agent that makes predictions and generates reasoning processes and a critic agent that analyzes incorrect predictions and provides guidance for improving the reasoning of the predictor agent. Our results demonstrate that with the proposed approach, LLMs can achieve decent few-shot performance compared to traditional supervised learning methods in EHR-based disease predictions, suggesting its potential for health-oriented applications.

cs.CL↗

arXiv2024

How Many Validation Labels Do You Need? Exploring the Design Space of Label-Efficient Model Ranking

This paper presents LEMR (Label-Efficient Model Ranking) and introduces the MoraBench Benchmark. LEMR is a novel framework that minimizes the need for costly annotations in model selection by strategically annotating instances from an unlabeled validation set. To evaluate LEMR, we leverage the MoraBench Benchmark, a comprehensive collection of model outputs across diverse scenarios. Our extensive evaluation across 23 different NLP tasks in semi-supervised learning, weak supervision, and prompt selection tasks demonstrates LEMR's effectiveness in significantly reducing labeling costs. Key findings highlight the impact of suitable ensemble methods, uncertainty sampling strategies, and model committee selection in enhancing model ranking accuracy. LEMR, supported by the insights from MoraBench, provides a cost-effective and accurate solution for model selection, especially valuable in resource-constrained environments.

cs.LG↗

arXiv2024

Leveraging Large Language Models for Structure Learning in Prompted Weak Supervision

Prompted weak supervision (PromptedWS) applies pre-trained large language models (LLMs) as the basis for labeling functions (LFs) in a weak supervision framework to obtain large labeled datasets. We further extend the use of LLMs in the loop to address one of the key challenges in weak supervision: learning the statistical dependency structure among supervision sources. In this work, we ask the LLM how similar are these prompted LFs. We propose a Structure Refining Module, a simple yet effective first approach based on the similarities of the prompts by taking advantage of the intrinsic structure in the embedding space. At the core of Structure Refining Module are Labeling Function Removal (LaRe) and Correlation Structure Generation (CosGen). Compared to previous methods that learn the dependencies from weak labels, our method finds the dependencies which are intrinsic to the LFs and less dependent on the data. We show that our Structure Refining Module improves the PromptedWS pipeline by up to 12.7 points on the benchmark tasks. We also explore the trade-offs between efficiency and performance with comprehensive ablation experiments and analysis. Code for this project can be found in https://github.com/BatsResearch/su-bigdata23-code.

cs.LG↗

arXiv2024

MaskSearch: Querying Image Masks at Scale

Machine learning tasks over image databases often generate masks that annotate image content (e.g., saliency maps, segmentation maps, depth maps) and enable a variety of applications (e.g., determine if a model is learning spurious correlations or if an image was maliciously modified to mislead a model). While queries that retrieve examples based on mask properties are valuable to practitioners, existing systems do not support them efficiently. In this paper, we formalize the problem and propose MaskSearch, a system that focuses on accelerating queries over databases of image masks while guaranteeing the correctness of query results. MaskSearch leverages a novel indexing technique and an efficient filter-verification query execution framework. Experiments with our prototype show that MaskSearch, using indexes approximately 5% of the compressed data size, accelerates individual queries by up to two orders of magnitude and consistently outperforms existing methods on various multi-query workloads that simulate dataset exploration and analysis processes.

cs.DB↗

arXiv2023

On the Trade-off of Intra-/Inter-class Diversity for Supervised Pre-training

Pre-training datasets are critical for building state-of-the-art machine learning models, motivating rigorous study on their impact on downstream tasks. In this work, we study the impact of the trade-off between the intra-class diversity (the number of samples per class) and the inter-class diversity (the number of classes) of a supervised pre-training dataset. Empirically, we found that with the size of the pre-training dataset fixed, the best downstream performance comes with a balance on the intra-/inter-class diversity. To understand the underlying mechanism, we show theoretically that the downstream performance depends monotonically on both types of diversity. Notably, our theory reveals that the optimal class-to-sample ratio (#classes / #samples per class) is invariant to the size of the pre-training dataset, which motivates an application of predicting the optimal number of pre-training classes. We demonstrate the effectiveness of this application by an improvement of around 2 points on the downstream tasks when using ImageNet as the pre-training dataset.

cs.LG↗

arXiv2023

Single-Pass Contrastive Learning Can Work for Both Homophilic and Heterophilic Graph

Existing graph contrastive learning (GCL) techniques typically require two forward passes for a single instance to construct the contrastive loss, which is effective for capturing the low-frequency signals of node features. Such a dual-pass design has shown empirical success on homophilic graphs, but its effectiveness on heterophilic graphs, where directly connected nodes typically have different labels, is unknown. In addition, existing GCL approaches fail to provide strong performance guarantees. Coupled with the unpredictability of GCL approaches on heterophilic graphs, their applicability in real-world contexts is limited. Then, a natural question arises: Can we design a GCL method that works for both homophilic and heterophilic graphs with a performance guarantee? To answer this question, we theoretically study the concentration property of features obtained by neighborhood aggregation on homophilic and heterophilic graphs, introduce the single-pass augmentation-free graph contrastive learning loss based on the property, and provide performance guarantees for the minimizer of the loss on downstream tasks. As a direct consequence of our analysis, we implement the Single-Pass Graph Contrastive Learning method (SP-GCL). Empirically, on 14 benchmark datasets with varying degrees of homophily, the features learned by the SP-GCL can match or outperform existing strong baselines with significantly less computational overhead, which demonstrates the usefulness of our findings in real-world cases.

cs.LG↗

arXiv2023

DataComp: In search of the next generation of multimodal datasets

Multimodal datasets are a critical component in recent breakthroughs such as Stable Diffusion and GPT-4, yet their design does not receive the same research attention as model architectures or training algorithms. To address this shortcoming in the ML ecosystem, we introduce DataComp, a testbed for dataset experiments centered around a new candidate pool of 12.8 billion image-text pairs from Common Crawl. Participants in our benchmark design new filtering techniques or curate new data sources and then evaluate their new dataset by running our standardized CLIP training code and testing the resulting model on 38 downstream test sets. Our benchmark consists of multiple compute scales spanning four orders of magnitude, which enables the study of scaling trends and makes the benchmark accessible to researchers with varying resources. Our baseline experiments show that the DataComp workflow leads to better training sets. In particular, our best baseline, DataComp-1B, enables training a CLIP ViT-L/14 from scratch to 79.2% zero-shot accuracy on ImageNet, outperforming OpenAI's CLIP ViT-L/14 by 3.7 percentage points while using the same training procedure and compute. We release DataComp and all accompanying code at www.datacomp.ai.

cs.CV↗

arXiv2023

NLPBench: Evaluating Large Language Models on Solving NLP Problems

Recent developments in large language models (LLMs) have shown promise in enhancing the capabilities of natural language processing (NLP). Despite these successes, there remains a dearth of research dedicated to the NLP problem-solving abilities of LLMs. To fill the gap in this area, we present a unique benchmarking dataset, NLPBench, comprising 378 college-level NLP questions spanning various NLP topics sourced from Yale University's prior final exams. NLPBench includes questions with context, in which multiple sub-questions share the same public information, and diverse question types, including multiple choice, short answer, and math. Our evaluation, centered on LLMs such as GPT-3.5/4, PaLM-2, and LLAMA-2, incorporates advanced prompting strategies like the chain-of-thought (CoT) and tree-of-thought (ToT). Our study reveals that the effectiveness of the advanced prompting strategies can be inconsistent, occasionally damaging LLM performance, especially in smaller models like the LLAMA-2 (13b). Furthermore, our manual assessment illuminated specific shortcomings in LLMs' scientific problem-solving skills, with weaknesses in logical decomposition and reasoning notably affecting results.

cs.CL↗

arXiv2023

Large Language Model as Attributed Training Data Generator: A Tale of Diversity and Bias

Large language models (LLMs) have been recently leveraged as training data generators for various natural language processing (NLP) tasks. While previous research has explored different approaches to training models using generated data, they generally rely on simple class-conditional prompts, which may limit the diversity of the generated data and inherit systematic biases of LLM. Thus, we investigate training data generation with diversely attributed prompts (e.g., specifying attributes like length and style), which have the potential to yield diverse and attributed generated data. Our investigation focuses on datasets with high cardinality and diverse domains, wherein we demonstrate that attributed prompts outperform simple class-conditional prompts in terms of the resulting model's performance. Additionally, we present a comprehensive empirical study on data generation encompassing vital aspects like bias, diversity, and efficiency, and highlight three key observations: firstly, synthetic datasets generated by simple prompts exhibit significant biases, such as regional bias; secondly, attribute diversity plays a pivotal role in enhancing model performance; lastly, attributed prompts achieve the performance of simple class-conditional prompts while utilizing only 5\% of the querying cost of ChatGPT associated with the latter. The data and code are available on \url{https://github.com/yueyu1030/AttrPrompt}.

cs.CL↗

arXiv2023

AutoGen: Enabling Next-Gen LLM Applications via Multi-Agent Conversation

AutoGen is an open-source framework that allows developers to build LLM applications via multiple agents that can converse with each other to accomplish tasks. AutoGen agents are customizable, conversable, and can operate in various modes that employ combinations of LLMs, human inputs, and tools. Using AutoGen, developers can also flexibly define agent interaction behaviors. Both natural language and computer code can be used to program flexible conversation patterns for different applications. AutoGen serves as a generic infrastructure to build diverse applications of various complexities and LLM capacities. Empirical studies demonstrate the effectiveness of the framework in many example applications, with domains ranging from mathematics, coding, question answering, operations research, online decision-making, entertainment, etc.

cs.AI↗

arXiv2023

EcoAssistant: Using LLM Assistant More Affordably and Accurately

Today, users ask Large language models (LLMs) as assistants to answer queries that require external knowledge; they ask about the weather in a specific city, about stock prices, and even about where specific locations are within their neighborhood. These queries require the LLM to produce code that invokes external APIs to answer the user's question, yet LLMs rarely produce correct code on the first try, requiring iterative code refinement upon execution results. In addition, using LLM assistants to support high query volumes can be expensive. In this work, we contribute a framework, EcoAssistant, that enables LLMs to answer code-driven queries more affordably and accurately. EcoAssistant contains three components. First, it allows the LLM assistants to converse with an automatic code executor to iteratively refine code or to produce answers based on the execution results. Second, we use a hierarchy of LLM assistants, which attempts to answer the query with weaker, cheaper LLMs before backing off to stronger, expensive ones. Third, we retrieve solutions from past successful queries as in-context demonstrations to help subsequent queries. Empirically, we show that EcoAssistant offers distinct advantages for affordability and accuracy, surpassing GPT-4 by 10 points of success rate with less than 50% of GPT-4's cost.

cs.SE↗

arXiv2023

When to Learn What: Model-Adaptive Data Augmentation Curriculum

Data augmentation (DA) is widely used to improve the generalization of neural networks by enforcing the invariances and symmetries to pre-defined transformations applied to input data. However, a fixed augmentation policy may have different effects on each sample in different training stages but existing approaches cannot adjust the policy to be adaptive to each sample and the training model. In this paper, we propose Model Adaptive Data Augmentation (MADAug) that jointly trains an augmentation policy network to teach the model when to learn what. Unlike previous work, MADAug selects augmentation operators for each input image by a model-adaptive policy varying between training stages, producing a data augmentation curriculum optimized for better generalization. In MADAug, we train the policy through a bi-level optimization scheme, which aims to minimize a validation-set loss of a model trained using the policy-produced data augmentations. We conduct an extensive evaluation of MADAug on multiple image classification tasks and network architectures with thorough comparisons to existing DA approaches. MADAug outperforms or is on par with other baselines and exhibits better fairness: it brings improvement to all classes and more to the difficult ones. Moreover, MADAug learned policy shows better performance when transferred to fine-grained datasets. In addition, the auto-optimized policy in MADAug gradually introduces increasing perturbations and naturally forms an easy-to-hard curriculum.

cs.CV↗