arXiv subjects

Jindong Han

Publications and source records attributed to Jindong Han.

At least 19 recordsLinked to original sources

arXiv2026

A Cost-Effective Multimodal LLM Reasoning Framework for Question Answering over Irregular Clinical Time Series

Question answering (QA) over irregular clinical time series (ICTS) plays a pivotal role in a wide range of healthcare applications. Although recent multimodal time-series large language models (LLMs) have shown considerable promise in general-purpose time-series QA, they remain poorly equipped to model the sparsity, asynchrony, and irregular sampling patterns of clinical observations. To fill this gap, we propose ClinPRISM, a cost-effective multimodal LLM reasoning framework for question answering over ICTS data. First, we devise an irregularity-aware multi-scale encoder to capture sparse clinical evidence at diverse temporal scales. Then, we propose a temporal evidence distiller to integrate representations across these scales and compress them into a small number of LLM-compatible tokens. Moreover, we introduce a progressive alignment strategy that sequentially aligns the irregular trajectories with the LLM's textual embedding space. To facilitate training, we construct 30,000 clinical time series paired with multi-scale descriptions, together with 41,000 instruction-tuning instances spanning 11 tasks. Using a 4-billion-parameter LLM backbone, ClinPRISM achieves state-of-the-art performance on the held-out evaluation benchmark while using only 16 time-series tokens and achieving an average inference latency of 0.15 seconds per question.

cs.AI↗

arXiv2026

ClinLens: Towards Long-Horizon Coding Agents for Longitudinal Multimodal Clinical Data Science

Clinical data-science agents must transform heterogeneous longitudinal records into auditable analyses, yet existing benchmarks largely isolate medical question answering, structured-table reasoning, or generic scientific repositories. We introduce CLINLENS, a benchmark of 200 executable tasks over five linked MIMIC resources spanning structured electronic health records, notes, electrocardiograms, chest radiographs, and echocardiograms. A 4 x 5 taxonomy crosses four patient-time scopes with five analysis capabilities. Program-first reverse synthesis pairs each bounded semi-raw package with an evaluator-private reference workflow and checks required artifacts, cohort and temporal semantics, and the final answer. On a fixed 126-task suite, the strongest of 24 standardized model-scaffold configurations achieves 56.3% scope-macro STRICTPASS despite 100% EXECSUCCESS. For reference, a separately configured coding agent solves 83 of 126 tasks, while five biomedical systems adapted to GPT-4o-mini reach at most 2.9% scope-macro STRICTPASS. These results expose a substantial gap between runnable submissions and correct clinical analyses.

cs.AI↗

arXiv2026

CLIR-Bench: Benchmarking Multimodal Question Answering over Irregular Clinical Time Series

Clinical time series are central to patient monitoring, risk assessment, and clinical decision support. However, they are often sparse, irregularly sampled, and asynchronous, making it difficult for models to identify the temporal evidence required for clinical Question Answering (QA). Existing benchmarks primarily focus on regularly sampled time-series QA or medical QA over static data, and therefore rarely assess whether models can faithfully ground their answers in irregular temporal observations. To fill this gap, we introduce CLIR-Bench, a benchmark for irregular clinical time series QA constructed from de-identified ICU records through a principled four-stage pipeline. CLIR-Bench contains 6,600 QA instances spanning 11 clinical variables, organized into four capability dimensions and 11 tasks. Each question is linked to explicit temporal evidence and task-specific answer derivation rules, enabling evaluation of both answer accuracy and evidence use. Experiments show that existing generalist models struggle to retrieve and reason over sparse clinical evidence, highlighting the need for stronger irregular time-series reasoning methods. Our code and data are available at https://huggingface.co/datasets/winall/CLIR-Bench.

cs.CL↗

arXiv2026

Atmospheric Diffusion-Guided Spatio-Temporal Transformer for Nuclear Radiation Forecasting

Nuclear radiation, the energy released during atomic decay, poses persistent risks to public health and the environment, and concerns have only grown since the Fukushima accident and the recent commencement of treated-water discharge. Modern monitoring networks now record radiation levels and accompanying weather conditions at thousands of stations, opening the door to nationwide forecasting that can inform emergency response, agricultural advisories, and routine public-safety decisions. However, turning this abundance of monitoring data into reliable forecasts is difficult for three reasons. First, the time series at each station are highly non-stationary, shaped by radioactive decay, weather variability, and irregular human interventions. Second, monitoring stations are severely unevenly distributed in space. Roughly 78% of Japan's stations sit in less than 6% of the country, clustered near Fukushima, which breaks the assumptions of standard graph-based models. Third, radiation co-evolves with heterogeneous context such as wind, temperature, and humidity through atmospheric transport processes that purely data-driven models struggle to capture from observations alone. In this study, we introduce NRFormer+, a spatio-temporal Transformer for nationwide nuclear radiation forecasting. NRFormer+ couples non-stationary temporal attention and density-adaptive spatial attention with a new atmospheric diffusion module that estimates how meteorology drives radiation dispersion and injects this physical signal into the network as an architectural prior. NRFormer+ delivers state-of-the-art accuracy on both datasets across all 13 baselines, reducing sudden-change MAE by up to 19.1% over the strongest baseline at comparable inference latency. Our code and datasets are publicly available at https://github.com/tfeilyu/NRFormer_Plus.

cs.AI↗

arXiv2026

TrafficClaw: A Generalizable LLM Agent in the Unified Physical Environment for Urban Traffic Control

Large language model (LLM) agents have shown strong capabilities in long-horizon reasoning, tool use, and decision-making in digital environments, yet extending them to physically grounded systems remains challenging. Unlike web, code, or game environments, where objectives are often weakly coupled, physical systems evolve through tightly coupled dynamics in which local interventions propagate across interacting subsystems over time. Urban traffic control exemplifies this challenge, as traffic signals, freeways, public transit, and taxi systems continuously interact through shared spatial infrastructure and temporal mobility demand. Existing optimization, reinforcement learning (RL), and LLM-based approaches are largely designed for isolated subsystems, limiting coordinated reasoning and system-level optimization. We propose TrafficClaw, a LLM-based generalizable traffic control agent for physical urban systems. TrafficClaw operates within a unified traffic environment that exposes coupled urban dynamics and feedback, performs executable spatiotemporal reasoning with persistent memory for long-horizon adaptation, and leverages multi-stage agentic RL for coordinated system-level optimization. Experiments across three metropolitan regions and six traffic-control tasks demonstrate strong generalization, robustness, and cross-subsystem coordination. Our project is available at https://github.com/usail-hkust/TrafficClaw.

cs.AI↗

arXiv2026

ClimAgent: LLM as Agents for Autonomous Open-ended Climate Science Analysis

Climate research is pivotal for mitigating global environmental crises, yet the accelerating volume of multi-scale datasets and the complexity of analytical tools have created significant bottlenecks, constraining scientific discovery to fragmented and labor-intensive workflows. While the emergence Large Language Models (LLMs) offers a transformative paradigm to scale scientific expertise, existing explorations remain largely confined to simple Question-Answering (Q&A) tasks. These approaches often oversimplify real-world challenges, neglecting the intricate physical constraints and the data-driven nature required in professional climate science.To bridge this gap, we introduce ClimAgent, a general-purpose autonomous framework designed to execute a wide spectrum of research tasks across diverse climate sub-fields. By integrating a unified tool-use environment with rigorous reasoning protocols, ClimAgent transcends simple retrieval to perform end-to-end modeling and analysis. To foster systematic evaluation, we propose ClimaBench, the first comprehensive benchmark for real-world climate discovery. It encompasses challenging problems spanning 5 distinct task categories derived from professional scenarios between 2000 and 2025. Experiments on ClimaBench demonstrate that ClimAgent significantly outperforms state-of-the-art baselines, achieving a 40.21% improvement over original LLM solutions in solution rigorousness and practicality. Our code are available at https://github.com/usail-hkust/ClimAgent.

cs.AI↗

arXiv2026

Enhancing Multivariate Time Series Forecasting with Global Temporal Retrieval

Multivariate time series forecasting (MTSF) plays a vital role in numerous real-world applications, yet existing models remain constrained by their reliance on a limited historical context. This limitation prevents them from effectively capturing global periodic patterns that often span cycles significantly longer than the input horizon - despite such patterns carrying strong predictive signals. Naive solutions, such as extending the historical window, lead to severe drawbacks, including overfitting, prohibitive computational costs, and redundant information processing. To address these challenges, we introduce the Global Temporal Retriever (GTR), a lightweight and plug-and-play module designed to extend any forecasting model's temporal awareness beyond the immediate historical context. GTR maintains an adaptive global temporal embedding of the entire cycle and dynamically retrieves and aligns relevant global segments with the input sequence. By jointly modeling local and global dependencies through a 2D convolution and residual fusion, GTR effectively bridges short-term observations with long-term periodicity without altering the host model architecture. Extensive experiments on six real-world datasets demonstrate that GTR consistently delivers state-of-the-art performance across both short-term and long-term forecasting scenarios, while incurring minimal parameter and computational overhead. These results highlight GTR as an efficient and general solution for enhancing global periodicity modeling in MTSF tasks. Code is available at this repository: https://github.com/macovaseas/GTR.

cs.LG↗

arXiv2026

MixTTE: Multi-Level Mixture-of-Experts for Scalable and Adaptive Travel Time Estimation

Accurate Travel Time Estimation (TTE) is critical for ride-hailing platforms, where errors directly impact user experience and operational efficiency. While existing production systems excel at holistic route-level dependency modeling, they struggle to capture city-scale traffic dynamics and long-tail scenarios, leading to unreliable predictions in large urban networks. In this paper, we propose \model, a scalable and adaptive framework that synergistically integrates link-level modeling with industrial route-level TTE systems. Specifically, we propose a spatio-temporal external attention module to capture global traffic dynamic dependencies across million-scale road networks efficiently. Moreover, we construct a stabilized graph mixture-of-experts network to handle heterogeneous traffic patterns while maintaining inference efficiency. Furthermore, an asynchronous incremental learning strategy is tailored to enable real-time and stable adaptation to dynamic traffic distribution shifts. Experiments on real-world datasets validate MixTTE significantly reduces prediction errors compared to seven baselines. MixTTE has been deployed in DiDi, substantially improving the accuracy and stability of the TTE service.

cs.LG↗

arXiv2025

DAMBench: A Multi-Modal Benchmark for Deep Learning-based Atmospheric Data Assimilation

Data Assimilation is a cornerstone of atmospheric system modeling, tasked with reconstructing system states by integrating sparse, noisy observations with prior estimation. While traditional approaches like variational and ensemble Kalman filtering have proven effective, recent advances in deep learning offer more scalable, efficient, and flexible alternatives better suited for complex, real-world data assimilation involving large-scale and multi-modal observations. However, existing deep learning-based DA research suffers from two critical limitations: (1) reliance on oversimplified scenarios with synthetically perturbed observations, and (2) the absence of standardized benchmarks for fair model comparison. To address these gaps, in this work, we introduce DAMBench, the first large-scale multi-modal benchmark designed to evaluate data-driven DA models under realistic atmospheric conditions. DAMBench integrates high-quality background states from state-of-the-art forecasting systems and real-world multi-modal observations (i.e., real-world weather stations and satellite imagery). All data are resampled to a common grid and temporally aligned to support systematic training, validation, and testing. We provide unified evaluation protocols and benchmark representative data assimilation approaches, including latent generative models and neural process frameworks. Additionally, we propose a lightweight multi-modal plugin to demonstrate how integrating realistic observations can enhance even simple baselines. Through comprehensive experiments, DAMBench establishes a rigorous foundation for future research, promoting reproducibility, fair comparison, and extensibility to real-world multi-modal scenarios. Our dataset and code are publicly available at https://github.com/figerhaowang/DAMBench.

cs.LG↗

arXiv2025

Foundation Models for Scientific Discovery: From Paradigm Enhancement to Paradigm Transition

Foundation models (FMs), such as GPT-4 and AlphaFold, are reshaping the landscape of scientific research. Beyond accelerating tasks such as hypothesis generation, experimental design, and result interpretation, they prompt a more fundamental question: Are FMs merely enhancing existing scientific methodologies, or are they redefining the way science is conducted? In this paper, we argue that FMs are catalyzing a transition toward a new scientific paradigm. We introduce a three-stage framework to describe this evolution: (1) Meta-Scientific Integration, where FMs enhance workflows within traditional paradigms; (2) Hybrid Human-AI Co-Creation, where FMs become active collaborators in problem formulation, reasoning, and discovery; and (3) Autonomous Scientific Discovery, where FMs operate as independent agents capable of generating new scientific knowledge with minimal human intervention. Through this lens, we review current applications and emerging capabilities of FMs across existing scientific paradigms. We further identify risks and future directions for FM-enabled scientific discovery. This position paper aims to support the scientific community in understanding the transformative role of FMs and to foster reflection on the future of scientific discovery. Our project is available at https://github.com/usail-hkust/Awesome-Foundation-Models-for-Scientific-Discovery.

cs.LG↗

arXiv2025

An LLM-Powered Cooperative Framework for Large-Scale Multi-Vehicle Navigation

The rise of Internet of Vehicles (IoV) technologies is transforming traffic management from isolated control to a collective, multi-vehicle process. At the heart of this shift is multi-vehicle dynamic navigation, which requires simultaneously routing large fleets under evolving traffic conditions. Existing path search algorithms and reinforcement learning methods struggle to scale to city-wide networks, often failing to capture the nonlinear, stochastic, and coupled dynamics of urban traffic. To address these challenges, we propose CityNav, a hierarchical, LLM-powered framework for large-scale multi-vehicle navigation. CityNav integrates a global traffic allocation agent, which coordinates strategic traffic flow distribution across regions, with local navigation agents that generate locally adaptive routes aligned with global directives. To enable effective cooperation, we introduce a cooperative reasoning optimization mechanism, in which agents are jointly trained with a dual-reward structure: individual rewards promote per-vehicle efficiency, while shared rewards encourage network-wide coordination and congestion reduction. Extensive experiments on four real-world road networks of varying scales (up to 1.6 million roads and 430,000 intersections) and traffic datasets demonstrate that CityNav consistently outperforms nine classical path search and RL-based baselines in city-scale travel efficiency and congestion mitigation. Our results highlight the potential of LLMs to enable scalable, adaptive, and cooperative city-wide traffic navigation, providing a foundation for intelligent, large-scale vehicle routing in complex urban environments. Our project is available at https://github.com/usail-hkust/CityNav.

cs.AI↗

arXiv2025

Large Language Model Powered Intelligent Urban Agents: Concepts, Capabilities, and Applications

The long-standing vision of intelligent cities is to create efficient, livable, and sustainable urban environments using big data and artificial intelligence technologies. Recently, the advent of Large Language Models (LLMs) has opened new ways toward realizing this vision. With powerful semantic understanding and reasoning capabilities, LLMs can be deployed as intelligent agents capable of autonomously solving complex problems across domains. In this article, we focus on Urban LLM Agents, which are LLM-powered agents that are semi-embodied within the hybrid cyber-physical-social space of cities and used for system-level urban decision-making. First, we introduce the concept of urban LLM agents, discussing their unique capabilities and features. Second, we survey the current research landscape from the perspective of agent workflows, encompassing urban sensing, memory management, reasoning, execution, and learning. Third, we categorize the application domains of urban LLM agents into five groups: urban planning, transportation, environment, public safety, and urban society, presenting representative works in each group. Finally, we discuss trustworthiness and evaluation issues that are critical for real-world deployment, and identify several open problems for future research. This survey aims to establish a foundation for the emerging field of urban LLM agents and to provide a roadmap for advancing the intersection of LLMs and urban intelligence. A curated list of relevant papers and open-source resources is maintained and continuously updated at https://github.com/usail-hkust/Awesome-Urban-LLM-Agents.

cs.MA↗

arXiv2025

PhyDA: Physics-Guided Diffusion Models for Data Assimilation in Atmospheric Systems

Data Assimilation (DA) plays a critical role in atmospheric science by reconstructing spatially continous estimates of the system state, which serves as initial conditions for scientific analysis. While recent advances in diffusion models have shown great potential for DA tasks, most existing approaches remain purely data-driven and often overlook the physical laws that govern complex atmospheric dynamics. As a result, they may yield physically inconsistent reconstructions that impair downstream applications. To overcome this limitation, we propose PhyDA, a physics-guided diffusion framework designed to ensure physical coherence in atmospheric data assimilation. PhyDA introduces two key components: (1) a Physically Regularized Diffusion Objective that integrates physical constraints into the training process by penalizing deviations from known physical laws expressed as partial differential equations, and (2) a Virtual Reconstruction Encoder that bridges observational sparsity for structured latent representations, further enhancing the model's ability to infer complete and physically coherent states. Experiments on the ERA5 reanalysis dataset demonstrate that PhyDA achieves superior accuracy and better physical plausibility compared to state-of-the-art baselines. Our results emphasize the importance of combining generative modeling with domain-specific physical knowledge and show that PhyDA offers a promising direction for improving real-world data assimilation systems.

cs.LG↗

arXiv2025

Unsupervised Graph Anomaly Detection via Multi-Hypersphere Heterophilic Graph Learning

Graph Anomaly Detection (GAD) plays a vital role in various data mining applications such as e-commerce fraud prevention and malicious user detection. Recently, Graph Neural Network (GNN) based approach has demonstrated great effectiveness in GAD by first encoding graph data into low-dimensional representations and then identifying anomalies under the guidance of supervised or unsupervised signals. However, existing GNN-based approaches implicitly follow the homophily principle (i.e., the "like attracts like" phenomenon) and fail to learn discriminative embedding for anomalies that connect vast normal nodes. Moreover, such approaches identify anomalies in a unified global perspective but overlook diversified abnormal patterns conditioned on local graph context, leading to suboptimal performance. To overcome the aforementioned limitations, in this paper, we propose a Multi-hypersphere Heterophilic Graph Learning (MHetGL) framework for unsupervised GAD. Specifically, we first devise a Heterophilic Graph Encoding (HGE) module to learn distinguishable representations for potential anomalies by purifying and augmenting their neighborhood in a fully unsupervised manner. Then, we propose a Multi-Hypersphere Learning (MHL) module to enhance the detection capability for context-dependent anomalies by jointly incorporating critical patterns from both global and local perspectives. Extensive experiments on ten real-world datasets show that MHetGL outperforms 14 baselines. Our code is publicly available at https://github.com/KennyNH/MHetGL.

cs.LG↗

arXiv2024

NRFormer: Nationwide Nuclear Radiation Forecasting with Spatio-Temporal Transformer

Nuclear radiation, which refers to the energy emitted from atomic nuclei during decay, poses significant risks to human health and environmental safety. Recently, advancements in monitoring technology have facilitated the effective recording of nuclear radiation levels and related factors, such as weather conditions. The abundance of monitoring data enables the development of accurate and reliable nuclear radiation forecasting models, which play a crucial role in informing decision-making for individuals and governments. However, this task is challenging due to the imbalanced distribution of monitoring stations over a wide spatial range and the non-stationary radiation variation patterns. In this study, we introduce NRFormer, a novel framework tailored for the nationwide prediction of nuclear radiation variations. By integrating a non-stationary temporal attention module, an imbalance-aware spatial attention module, and a radiation propagation prompting module, NRFormer collectively captures complex spatio-temporal dynamics of nuclear radiation. Extensive experiments on two real-world datasets demonstrate the superiority of our proposed framework against 11 baselines.

cs.LG↗

arXiv2024

Meta-Transfer Learning Powered Temporal Graph Networks for Cross-City Real Estate Appraisal

Real estate appraisal is important for a variety of endeavors such as real estate deals, investment analysis, and real property taxation. Recently, deep learning has shown great promise for real estate appraisal by harnessing substantial online transaction data from web platforms. Nonetheless, deep learning is data-hungry, and thus it may not be trivially applicable to enormous small cities with limited data. To this end, we propose Meta-Transfer Learning Powered Temporal Graph Networks (MetaTransfer) to transfer valuable knowledge from multiple data-rich metropolises to the data-scarce city to improve valuation performance. Specifically, by modeling the ever-growing real estate transactions with associated residential communities as a temporal event heterogeneous graph, we first design an Event-Triggered Temporal Graph Network to model the irregular spatiotemporal correlations between evolving real estate transactions. Besides, we formulate the city-wide real estate appraisal as a multi-task dynamic graph link label prediction problem, where the valuation of each community in a city is regarded as an individual task. A Hypernetwork-Based Multi-Task Learning module is proposed to simultaneously facilitate intra-city knowledge sharing between multiple communities and task-specific parameters generation to accommodate the community-wise real estate price distribution. Furthermore, we propose a Tri-Level Optimization Based Meta- Learning framework to adaptively re-weight training transaction instances from multiple source cities to mitigate negative transfer, and thus improve the cross-city knowledge transfer effectiveness. Finally, extensive experiments based on five real-world datasets demonstrate the significant superiority of MetaTransfer compared with eleven baseline algorithms.

cs.LG↗

arXiv2024

GraphLoRA: Structure-Aware Contrastive Low-Rank Adaptation for Cross-Graph Transfer Learning

Graph Neural Networks (GNNs) have demonstrated remarkable proficiency in handling a range of graph analytical tasks across various domains, such as e-commerce and social networks. Despite their versatility, GNNs face significant challenges in transferability, limiting their utility in real-world applications. Existing research in GNN transfer learning overlooks discrepancies in distribution among various graph datasets, facing challenges when transferring across different distributions. How to effectively adopt a well-trained GNN to new graphs with varying feature and structural distributions remains an under-explored problem. Taking inspiration from the success of Low-Rank Adaptation (LoRA) in adapting large language models to various domains, we propose GraphLoRA, an effective and parameter-efficient method for transferring well-trained GNNs to diverse graph domains. Specifically, we first propose a Structure-aware Maximum Mean Discrepancy (SMMD) to align divergent node feature distributions across source and target graphs. Moreover, we introduce low-rank adaptation by injecting a small trainable GNN alongside the pre-trained one, effectively bridging structural distribution gaps while mitigating the catastrophic forgetting. Additionally, a structure-aware regularization objective is proposed to enhance the adaptability of the pre-trained GNN to target graph with scarce supervision labels. Extensive experiments on eight real-world datasets demonstrate the effectiveness of GraphLoRA against fourteen baselines by tuning only 20% of parameters, even across disparate graph domains. The code is available at https://github.com/AllminerLab/GraphLoRA.

cs.LG↗

arXiv2024

Erase then Rectify: A Training-Free Parameter Editing Approach for Cost-Effective Graph Unlearning

Graph unlearning, which aims to eliminate the influence of specific nodes, edges, or attributes from a trained Graph Neural Network (GNN), is essential in applications where privacy, bias, or data obsolescence is a concern. However, existing graph unlearning techniques often necessitate additional training on the remaining data, leading to significant computational costs, particularly with large-scale graphs. To address these challenges, we propose a two-stage training-free approach, Erase then Rectify (ETR), designed for efficient and scalable graph unlearning while preserving the model utility. Specifically, we first build a theoretical foundation showing that masking parameters critical for unlearned samples enables effective unlearning. Building on this insight, the Erase stage strategically edits model parameters to eliminate the impact of unlearned samples and their propagated influence on intercorrelated nodes. To further ensure the GNN's utility, the Rectify stage devises a gradient approximation method to estimate the model's gradient on the remaining dataset, which is then used to enhance model performance. Overall, ETR achieves graph unlearning without additional training or full training data access, significantly reducing computational overhead and preserving data privacy. Extensive experiments on seven public datasets demonstrate the consistent superiority of ETR in model utility, unlearning efficiency, and unlearning effectiveness, establishing it as a promising solution for real-world graph unlearning challenges.

cs.LG↗