arXiv subjects

Jing Han

Publications and source records attributed to Jing Han.

At least 55 records · Page 3Linked to original sources

arXiv2022

Exploring Longitudinal Cough, Breath, and Voice Data for COVID-19 Progression Prediction via Sequential Deep Learning: Model Development and Validation

Recent work has shown the potential of using audio data (eg, cough, breathing, and voice) in the screening for COVID-19. However, these approaches only focus on one-off detection and detect the infection given the current audio sample, but do not monitor disease progression in COVID-19. Limited exploration has been put forward to continuously monitor COVID-19 progression, especially recovery, through longitudinal audio data. Tracking disease progression characteristics could lead to more timely treatment. The primary objective of this study is to explore the potential of longitudinal audio samples over time for COVID-19 progression prediction and, especially, recovery trend prediction using sequential deep learning techniques. Crowdsourced respiratory audio data, including breathing, cough, and voice samples, from 212 individuals over 5-385 days were analyzed. We developed a deep learning-enabled tracking tool using gated recurrent units (GRUs) to detect COVID-19 progression by exploring the audio dynamics of the individuals' historical audio biomarkers. The investigation comprised 2 parts: (1) COVID-19 detection in terms of positive and negative (healthy) tests, and (2) longitudinal disease progression prediction over time in terms of probability of positive tests. The strong performance for COVID-19 detection, yielding an AUROC of 0.79, a sensitivity of 0.75, and a specificity of 0.71 supported the effectiveness of the approach compared to methods that do not leverage longitudinal dynamics. We further examined the predicted disease progression trajectory, displaying high consistency with test results with a correlation of 0.75 in the test cohort and 0.86 in a subset of the test cohort who reported recovery. Our findings suggest that monitoring COVID-19 evolution via longitudinal audio data has potential in the tracking of individuals' disease progression and recovery.

cs.SD↗

arXiv2022

Indoor simultaneous localization and mapping based on fringe projection profilometry

Simultaneous Localization and Mapping (SLAM) plays an important role in outdoor and indoor applications ranging from autonomous driving to indoor robotics. Outdoor SLAM has been widely used with the assistance of LiDAR or GPS. For indoor applications, the LiDAR technique does not satisfy the accuracy requirement and the GPS signals will be lost. An accurate and efficient scene sensing technique is required for indoor SLAM. As the most promising 3D sensing technique, the opportunities for indoor SLAM with fringe projection profilometry (FPP) systems are obvious, but methods to date have not fully leveraged the accuracy and speed of sensing that such systems offer. In this paper, we propose a novel FPP-based indoor SLAM method based on the coordinate transformation relationship of FPP, where the 2D-to-3D descriptor-assisted is used for mapping and localization. The correspondences generated by matching descriptors are used for fast and accurate mapping, and the transform estimation between the 2D and 3D descriptors is used to localize the sensor. The provided experimental results demonstrate that the proposed indoor SLAM can achieve the localization and mapping accuracy around one millimeter.

cs.RO↗

arXiv2022

A Summary of the ComParE COVID-19 Challenges

The COVID-19 pandemic has caused massive humanitarian and economic damage. Teams of scientists from a broad range of disciplines have searched for methods to help governments and communities combat the disease. One avenue from the machine learning field which has been explored is the prospect of a digital mass test which can detect COVID-19 from infected individuals' respiratory sounds. We present a summary of the results from the INTERSPEECH 2021 Computational Paralinguistics Challenges: COVID-19 Cough, (CCS) and COVID-19 Speech, (CSS).

cs.SD↗

arXiv2022

Benchmarking Uncertainty Quantification on Biosignal Classification Tasks under Dataset Shift

A biosignal is a signal that can be continuously measured from human bodies, such as respiratory sounds, heart activity (ECG), brain waves (EEG), etc, based on which, machine learning models have been developed with very promising performance for automatic disease detection and health status monitoring. However, dataset shift, i.e., data distribution of inference varies from the distribution of the training, is not uncommon for real biosignal-based applications. To improve the robustness, probabilistic models with uncertainty quantification are adapted to capture how reliable a prediction is. Yet, assessing the quality of the estimated uncertainty remains a challenge. In this work, we propose a framework to evaluate the capability of the estimated uncertainty in capturing different types of biosignal dataset shifts with various degrees. In particular, we use three classification tasks based on respiratory sounds and electrocardiography signals to benchmark five representative uncertainty quantification methods. Extensive experiments show that, although Ensemble and Bayesian models could provide relatively better uncertainty estimations under dataset shifts, all tested models fail to meet the promise in trustworthy prediction and model calibration. Our work paves the way for a comprehensive evaluation for any newly developed biosignal classifiers.

cs.LG↗

arXiv2022

On Nonlocal Cohesive Continuum Mechanics and Cohesive Peridynamic Modeling (CPDM) of Inelastic Fracture

In this work, we developed a bond-based cohesive peridynamics model (CPDM) and apply it to simulate inelastic fracture by using the meso-scale Xu-Needleman cohesive potential . By doing so, we have successfully developed a bond-based cohesive continuum mechanics model with intrinsic stress/strain measures as well as consistent and built-in macro-scale constitutive relations. The main novelties of this work are: (1) We have shown that the cohesive stress of the proposed nonlocal cohesive continuum mechanics model is exactly the same as the nonlocal peridynamic stress; (2) For the first time, we have applied an irreversible built-in cohesive stress-strain relation in a bond-based cohesive peridynamics to model inelastic material behaviors without prescribing phenomenological plasticity stress-strain relations; (3) The cohesive bond force possesses both axial and tangential components, and they contribute a nonlinear constitutive relation with variable Poisson's ratios; (4) The bond-based cohesive constitutive model is consistent with the cohesive fracture criterion, and (5) We have shown that the proposed method is able to model inelastic fracture and simulate ductile fracture of small scale yielding in the nonlocal cohesive continua. Several numerical examples have been presented to be compared with the finite element based continuum cohesive zone model, which shows that the proposed approach is a simple, efficient and effective method to model inelastic fracture in the nonlocal cohesive media.

cond-mat.mtrl-sci↗

arXiv2021

A Reinforcement Learning-based Adaptive Control Model for Future Street Planning, An Algorithm and A Case Study

With the emerging technologies in Intelligent Transportation System (ITS), the adaptive operation of road space is likely to be realised within decades. An intelligent street can learn and improve its decision-making on the right-of-way (ROW) for road users, liberating more active pedestrian space while maintaining traffic safety and efficiency. However, there is a lack of effective controlling techniques for these adaptive street infrastructures. To fill this gap in existing studies, we formulate this control problem as a Markov Game and develop a solution based on the multi-agent Deep Deterministic Policy Gradient (MADDPG) algorithm. The proposed model can dynamically assign ROW for sidewalks, autonomous vehicles (AVs) driving lanes and on-street parking areas in real-time. Integrated with the SUMO traffic simulator, this model was evaluated using the road network of the South Kensington District against three cases of divergent traffic conditions: pedestrian flow rates, AVs traffic flow rates and parking demands. Results reveal that our model can achieve an average reduction of 3.87% and 6.26% in street space assigned for on-street parking and vehicular operations. Combined with space gained by limiting the number of driving lanes, the average proportion of sidewalks to total widths of streets can significantly increase by 10.13%.

cs.AI↗

arXiv2021

Dual camera snapshot hyperspectral imaging system via physics informed learning

We consider using the system's optical imaging process with convolutional neural networks (CNNs) to solve the snapshot hyperspectral imaging reconstruction problem, which uses a dual-camera system to capture the three-dimensional hyperspectral images (HSIs) in a compressed way. Various methods using CNNs have been developed in recent years to reconstruct HSIs, but most of the supervised deep learning methods aimed to fit a brute-force mapping relationship between the captured compressed image and standard HSIs. Thus, the learned mapping would be invalid when the observation data deviate from the training data. Especially, we usually don't have ground truth in real-life scenarios. In this paper, we present a self-supervised dual-camera equipment with an untrained physics-informed CNNs framework. Extensive simulation and experimental results show that our method without training can be adapted to a wide imaging environment with good performance. Furthermore, compared with the training-based methods, our system can be constantly fine-tuned and self-improved in real-life scenarios.

eess.IV↗

arXiv2021

Segmentation-free Heart Pathology Detection Using Deep Learning

Cardiovascular (CV) diseases are the leading cause of death in the world, and auscultation is typically an essential part of a cardiovascular examination. The ability to diagnose a patient based on their heart sounds is a rather difficult skill to master. Thus, many approaches for automated heart auscultation have been explored. However, most of the previously proposed methods involve a segmentation step, the performance of which drops significantly for high pulse rates or noisy signals. In this work, we propose a novel segmentation-free heart sound classification method. Specifically, we apply discrete wavelet transform to denoise the signal, followed by feature extraction and feature reduction. Then, Support Vector Machines and Deep Neural Networks are utilised for classification. On the PASCAL heart sound dataset our approach showed superior performance compared to others, achieving 81% and 96% precision on normal and murmur classes, respectively. In addition, for the first time, the data were further explored under a user-independent setting, where the proposed method achieved 92% and 86% precision on normal and murmur, demonstrating the potential of enabling automatic murmur detection for practical use.

cs.SD↗

arXiv2021

Sounds of COVID-19: exploring realistic performance of audio-based digital testing

Researchers have been battling with the question of how we can identify Coronavirus disease (COVID-19) cases efficiently, affordably and at scale. Recent work has shown how audio based approaches, which collect respiratory audio data (cough, breathing and voice) can be used for testing, however there is a lack of exploration of how biases and methodological decisions impact these tools' performance in practice. In this paper, we explore the realistic performance of audio-based digital testing of COVID-19. To investigate this, we collected a large crowdsourced respiratory audio dataset through a mobile app, alongside recent COVID-19 test result and symptoms intended as a ground truth. Within the collected dataset, we selected 5,240 samples from 2,478 participants and split them into different participant-independent sets for model development and validation. Among these, we controlled for potential confounding factors (such as demographics and language). The unbiased model takes features extracted from breathing, coughs, and voice signals as predictors and yields an AUC-ROC of 0.71 (95\% CI: 0.65$-$0.77). We further explore different unbalanced distributions to show how biases and participant splits affect performance. Finally, we discuss how the realistic model presented could be integrated in clinical practice to realize continuous, ubiquitous, sustainable and affordable testing at population scale.

cs.SD↗

arXiv2021

Learning audio sequence representations for acoustic event classification

Acoustic Event Classification (AEC) has become a significant task for machines to perceive the surrounding auditory scene. However, extracting effective representations that capture the underlying characteristics of the acoustic events is still challenging. Previous methods mainly focused on designing the audio features in a `hand-crafted' manner. Interestingly, data-learnt features have been recently reported to show better performance. Up to now, these were only considered on the frame level. In this article, we propose an unsupervised learning framework to learn a vector representation of an audio sequence for AEC. This framework consists of a Recurrent Neural Network (RNN) encoder and an RNN decoder, which respectively transforms the variable-length audio sequence into a fixed-length vector and reconstructs the input sequence on the generated vector. After training the encoder-decoder, we feed the audio sequences to the encoder and then take the learnt vectors as the audio sequence representations. Compared with previous methods, the proposed method can not only deal with the problem of arbitrary-lengths of audio streams, but also learn the salient information of the sequence. Extensive evaluation on a large-size acoustic event database is performed, and the empirical results demonstrate that the learnt audio sequence representation yields a significant performance improvement by a large margin compared with other state-of-the-art hand-crafted sequence features for AEC.

cs.SD↗

arXiv2021

Uncertainty-Aware COVID-19 Detection from Imbalanced Sound Data

Recently, sound-based COVID-19 detection studies have shown great promise to achieve scalable and prompt digital pre-screening. However, there are still two unsolved issues hindering the practice. First, collected datasets for model training are often imbalanced, with a considerably smaller proportion of users tested positive, making it harder to learn representative and robust features. Second, deep learning models are generally overconfident in their predictions. Clinically, false predictions aggravate healthcare costs. Estimation of the uncertainty of screening would aid this. To handle these issues, we propose an ensemble framework where multiple deep learning models for sound-based COVID-19 detection are developed from different but balanced subsets from original data. As such, data are utilized more effectively compared to traditional up-sampling and down-sampling approaches: an AUC of 0.74 with a sensitivity of 0.68 and a specificity of 0.69 is achieved. Simultaneously, we estimate uncertainty from the disagreement across multiple models. It is shown that false predictions often yield higher uncertainty, enabling us to suggest the users with certainty higher than a threshold to repeat the audio test on their phones or to take clinical tests if digital diagnosis still fails. This study paves the way for a more robust sound-based COVID-19 automated screening system.

cs.SD↗

arXiv2021

Fitbeat: COVID-19 Estimation based on Wristband Heart Rate

This study investigates the potential of deep learning methods to identify individuals with suspected COVID-19 infection using remotely collected heart-rate data. The study utilises data from the ongoing EU IMI RADAR-CNS research project that is investigating the feasibility of wearable devices and smart phones to monitor individuals with multiple sclerosis (MS), depression or epilepsy. Aspart of the project protocol, heart-rate data was collected from participants using a Fitbit wristband. The presence of COVID-19 in the cohort in this work was either confirmed through a positive swab test, or inferred through the self-reporting of a combination of symptoms including fever, respiratory symptoms, loss of smell or taste, tiredness and gastrointestinal symptoms. Experimental results indicate that our proposed contrastive convolutional auto-encoder (contrastive CAE), i. e., a combined architecture of an auto-encoder and contrastive loss, outperforms a conventional convolutional neural network (CNN), as well as a convolutional auto-encoder (CAE) without using contrastive loss. Our final contrastive CAE achieves 95.3% unweighted average recall, 86.4% precision, anF1 measure of 88.2%, a sensitivity of 100% and a specificity of 90.6% on a testset of 19 participants with MS who reported symptoms of COVID-19. Each of these participants was paired with a participant with MS with no COVID-19 symptoms.

eess.SP↗

arXiv2021

Base Station Network Traffic Prediction Approach Based on LMA-DeepAR

Accurate network traffic prediction of base station cell is very vital for the expansion and reduction of wireless devices in base station cell. The burst and uncertainty of base station cell network traffic makes the network traffic nonlinear and non-stationary, which brings challenges to the long-term prediction of network traffic. In this paper, the traffic model LMA-DeepAR for base station network is established based on DeepAR. Acordding to the distribution characteristics of network traffic, this paper proposes an artificial feature sequence calculation method based on local moving average (LMA). The feature sequence is input into DeepAR as covariant, which makes the statistical characteristics of network traffic near a period of time in the past be considered when updating parameters, and the interference of non-stationary network traffic on model training will be reduced. Experimental results show that the proposed prediction approach (LMA-DeepAR) outperforms other methods in the overall long-term prediction performance and stability of multi cell network traffic.

cs.NI↗

arXiv2021

The INTERSPEECH 2021 Computational Paralinguistics Challenge: COVID-19 Cough, COVID-19 Speech, Escalation & Primates

The INTERSPEECH 2021 Computational Paralinguistics Challenge addresses four different problems for the first time in a research competition under well-defined conditions: In the COVID-19 Cough and COVID-19 Speech Sub-Challenges, a binary classification on COVID-19 infection has to be made based on coughing sounds and speech; in the Escalation SubChallenge, a three-way assessment of the level of escalation in a dialogue is featured; and in the Primates Sub-Challenge, four species vs background need to be classified. We describe the Sub-Challenges, baseline feature extraction, and classifiers based on the 'usual' COMPARE and BoAW features as well as deep unsupervised representation learning using the AuDeep toolkit, and deep feature extraction from pre-trained CNNs using the Deep Spectrum toolkit; in addition, we add deep end-to-end sequential modelling, and partially linguistic analysis.

eess.AS↗

arXiv2021

Exploring Automatic COVID-19 Diagnosis via voice and symptoms from Crowdsourced Data

The development of fast and accurate screening tools, which could facilitate testing and prevent more costly clinical tests, is key to the current pandemic of COVID-19. In this context, some initial work shows promise in detecting diagnostic signals of COVID-19 from audio sounds. In this paper, we propose a voice-based framework to automatically detect individuals who have tested positive for COVID-19. We evaluate the performance of the proposed framework on a subset of data crowdsourced from our app, containing 828 samples from 343 participants. By combining voice signals and reported symptoms, an AUC of $0.79$ has been attained, with a sensitivity of $0.68$ and a specificity of $0.82$. We hope that this study opens the door to rapid, low-cost, and convenient pre-screening tools to automatically detect the disease.

cs.SD↗

arXiv2021

Exploring Automatic Diagnosis of COVID-19 from Crowdsourced Respiratory Sound Data

Audio signals generated by the human body (e.g., sighs, breathing, heart, digestion, vibration sounds) have routinely been used by clinicians as indicators to diagnose disease or assess disease progression. Until recently, such signals were usually collected through manual auscultation at scheduled visits. Research has now started to use digital technology to gather bodily sounds (e.g., from digital stethoscopes) for cardiovascular or respiratory examination, which could then be used for automatic analysis. Some initial work shows promise in detecting diagnostic signals of COVID-19 from voice and coughs. In this paper we describe our data analysis over a large-scale crowdsourced dataset of respiratory sounds collected to aid diagnosis of COVID-19. We use coughs and breathing to understand how discernible COVID-19 sounds are from those in asthma or healthy controls. Our results show that even a simple binary machine learning classifier is able to classify correctly healthy and COVID-19 sounds. We also show how we distinguish a user who tested positive for COVID-19 and has a cough from a healthy user with a cough, and users who tested positive for COVID-19 and have a cough from users with asthma and a cough. Our models achieve an AUC of above 80% across all tasks. These results are preliminary and only scratch the surface of the potential of this type of data and audio-based machine learning. This work opens the door to further investigation of how automatically analysed respiratory patterns could be used as pre-screening signals to aid COVID-19 diagnosis.

cs.SD↗

arXiv2020

Compositional Prototype Network with Multi-view Comparision for Few-Shot Point Cloud Semantic Segmentation

Point cloud segmentation is a fundamental visual understanding task in 3D vision. A fully supervised point cloud segmentation network often requires a large amount of data with point-wise annotations, which is expensive to obtain. In this work, we present the Compositional Prototype Network that can undertake point cloud segmentation with only a few labeled training data. Inspired by the few-shot learning literature in images, our network directly transfers label information from the limited training data to unlabeled test data for prediction. The network decomposes the representations of complex point cloud data into a set of local regional representations and utilizes them to calculate the compositional prototypes of a visual concept. Our network includes a key Multi-View Comparison Component that exploits the redundant views of the support set. To evaluate the proposed method, we create a new segmentation benchmark dataset, ScanNet-$6^i$, which is built upon ScanNet dataset. Extensive experiments show that our method outperforms baselines with a significant advantage. Moreover, when we use our network to handle the long-tail problem in a fully supervised point cloud segmentation dataset, it can also effectively boost the performance of the few-shot classes.

cs.CV↗

arXiv2020

CAA-Net: Conditional Atrous CNNs with Attention for Explainable Device-robust Acoustic Scene Classification

Acoustic Scene Classification (ASC) aims to classify the environment in which the audio signals are recorded. Recently, Convolutional Neural Networks (CNNs) have been successfully applied to ASC. However, the data distributions of the audio signals recorded with multiple devices are different. There has been little research on the training of robust neural networks on acoustic scene datasets recorded with multiple devices, and on explaining the operation of the internal layers of the neural networks. In this article, we focus on training and explaining device-robust CNNs on multi-device acoustic scene data. We propose conditional atrous CNNs with attention for multi-device ASC. Our proposed system contains an ASC branch and a device classification branch, both modelled by CNNs. We visualise and analyse the intermediate layers of the atrous CNNs. A time-frequency attention mechanism is employed to analyse the contribution of each time-frequency bin of the feature maps in the CNNs. On the Detection and Classification of Acoustic Scenes and Events (DCASE) 2018 ASC dataset, recorded with three devices, our proposed model performs significantly better than CNNs trained on single-device data.

cs.SD↗