arXiv subjects

Jingjing Zou

Publications and source records attributed to Jingjing Zou.

12 recordsLinked to original sources

arXiv2026

Sedentary Behavior Classification for Wearable Sensors with a CNN-BiLSTM Model

Accurate detection of sedentary behavior is important for studying health risks related to prolonged sitting, but posture-based classification remains challenging with wearable sensors, especially at the wrist. We study whether a deep learning model trained on hip-worn accelerometer data can transfer to wrist-worn accelerometer data for sitting versus non-sitting classification. We use CHAP, a CNN-BiLSTM model originally developed for hip accelerometers, and evaluate its zero-shot performance on wrist data as well as its adaptation through finetuning with varying amounts of labeled wrist data. Experiments are conducted on the iWatch dataset with ground-truth posture labels derived from wearable cameras. The hip-trained model performs strongly on hip data without retraining, but accuracy drops on wrist data due to sensor placement shift. Finetuning CHAP provides consistent advantages over transformer models trained from scratch. These findings suggest that hip-based pretraining provides a useful starting point for wrist deployment, while highlighting the need for wrist-specific adaptation to handle higher signal variability.

cs.LG↗

arXiv2026

Modeling Physical Activity Change as Smooth Transformations: Temporal and Amplitude Patterns Associated with Physical Function in Older Women

Purpose: To investigate whether longitudinal changes in timing and magnitude of PA are associated with physical function (PF) in older women. Methods: Women from OPACH study with accelerometry at baseline and WHISH study W1 and W2 were included. Minute-level PA counts were averaged and smoothed as diurnal PA curves. Consecutive-visit change was modeled within periods (baseline--W1 and W1--W2) as a Riemannian deformation from earlier to later curves, with two-dimensional initial momenta characterizing timing and magnitude shifts. Multivariate functional principal component analysis (MFPCA) summarized coupled timing-magnitude patterns, and principal component (PC) scores and deformation energy were derived for each participant-period. Linear mixed-effects models related these features to RAND-36 PF, adjusting for baseline PF and covariates. Results: Mean PA deformation in both periods showed downward shifts in PA magnitude and temporal redistribution after 10:00. Top 15 PCs explained at least 90% of variability in both periods. PC1 captured diurnal PA increase/decrease, explaining 22.4% of variability for baseline--W1 and 20.8% for W1--W2. Among participants with complete PF scores and baseline covariates (N=1,157), higher PC1 scores, reflecting relative increase/maintenance of PA across day, were positively associated with PF (P<0.0001). Deformation energy, a metric for overall diurnal pattern change between visits, showed a significant interaction with period for PF (P=0.003), with a larger positive association during W1--W2 than during baseline--W1. Conclusions: In older women, longitudinal changes in diurnal PA accumulation were associated with PF. Riemannian deformation analysis identified clinically interpretable markers of PA pattern change that may capture functional-aging information not represented by conventional PA summaries.

stat.AP↗

arXiv2025

MoCA: Multi-modal Cross-masked Autoencoder for Time Series in Digital Health

Wearable devices enable continuous multi-modal physiological and behavioral monitoring, yet analysis of these data streams faces fundamental challenges including the lack of gold-standard labels and incomplete sensor data. While self-supervised learning approaches have shown promise for addressing these issues, existing multi-modal extensions present opportunities to better leverage the rich temporal and cross-modal correlations inherent in simultaneously recorded wearable sensor data. We propose the Multi-modal Cross-masked Autoencoder (MoCA), a self-supervised learning framework that combines transformer architecture with masked autoencoder (MAE) methodology, using a principled cross-modality masking scheme that explicitly leverages correlation structures between sensor modalities. MoCA demonstrates strong performance boosts across reconstruction and downstream classification tasks on diverse benchmark datasets. We further establish theoretical guarantees by establishing a fundamental connection between multi-modal MAE loss and kernelized canonical correlation analysis through a Reproducing Kernel Hilbert Space framework, providing principled guidance for correlation-aware masking strategy design. Our approach offers a novel solution for leveraging unlabeled multi-modal wearable data while handling missing modalities, with broad applications across digital health domains.

stat.ML↗

arXiv2024

A doubly robust estimator for the Mann Whitney Wilcoxon Rank Sum Test when applied for causal inference in observational studies

The Mann-Whitney-Wilcoxon rank sum test (MWWRST) is a widely used method for comparing two treatment groups in randomized control trials, particularly when dealing with highly skewed data. However, when applied to observational study data, the MWWRST often yields invalid results for causal inference. To address this limitation, Wu et al. (2014) introduced an approach that incorporates inverse probability weighting (IPW) into this rank-based statistics to mitigate confounding effects. Subsequently, Mao (2018), Zhang et al. (2019), and Ai et al. (2020) extended this IPW estimator to develop doubly robust estimators. Nevertheless, each of these approaches has notable limitations. Mao's method imposes stringent assumptions that may not align with real-world study data. Zhang et al.'s (2019) estimators rely on bootstrap inference, which suffers from computational inefficiency and lacks known asymptotic properties. Meanwhile, Ai et al. (2020) primarily focus on testing the null hypothesis of equal distributions between two groups, which is a more stringent assumption that may not be well-suited to the primary practical application of MWWRST. In this paper, we aim to address these limitations by leveraging functional response models (FRM) to develop doubly robust estimators. We demonstrate the performance of our proposed approach using both simulated and real study data.

stat.ME↗

arXiv2023

Optimal Designs of Two-Phase Case-Control Studies for General Predictor Effects

Under two-phase designs, the outcome and several covariates and confounders are measured in the first phase, and a new predictor of interest, which may be costly to collect, can be measured on a subsample in the second phase, without incurring the costs of recruiting subjects. By using the information gathered in the first phase, the second-phase subsample can be selected to enhance the efficiency of testing and estimating the effect of the new predictor on the outcome. Past studies have focused on optimal two-phase sampling schemes for statistical inference on local ($β= o(1)$) effects of the predictor of interest. In this study, we propose an extension of the two-phase designs that employs an optimal sampling scheme for estimating predictor effects with pseudo conditional likelihood estimators in case-control studies. This approach is applicable to both local and non-local effects. We demonstrate the effectiveness of the proposed sampling scheme through simulation studies and analysis of data from 170 patients hospitalized for treatment of COVID-19. The results show a significant improvement in the estimation of the parameter of interest.

stat.ME↗

arXiv2023

Joint Modeling for Geometry and Functionality of Cerebral Cortical Surface Images

We propose a framework for jointly modeling the geometry and functionality in high dimensional functional surfaces. The proposed mixed effects model characterizes effects of subject-specific covariates and exogenous stimuli on functional surfaces while accounting for potential mutual-influence of their geometry and functionality. This is achieved through a computationally efficient estimation method that incorporates regularized estimation of the precision matrix of the random effects. We perform a thorough analysis of cerebral cortical surface structural MRI and task fMRI data from the Human Connectome Project and discover relationships between the geometric shapes of cortical surface and neuronal activation responding to task stimuli. Our findings highlight new modes of correspondence between cortical surface shape and functional activation relevant to emotion processing.

stat.AP↗

arXiv2022

A Riemann Manifold Model Framework for Longitudinal Changes in Physical Activity Patterns

Physical activity (PA) is significantly associated with many health outcomes. The wide usage of wearable accelerometer-based activity trackers in recent years has provided a unique opportunity for in-depth research on PA and its relations with health outcomes and interventions. Past analysis of activity tracker data relies heavily on aggregating minute-level PA records into day-level summary statistics, in which important information of PA temporal/diurnal patterns is lost. In this paper we propose a novel functional data analysis approach based on Riemann manifolds for modeling PA and its longitudinal changes. We model smoothed minute-level PA of a day as one-dimensional Riemann manifolds and longitudinal changes in PA in different visits as deformations between manifolds. The variability in changes of PA among a cohort of subjects is characterized via variability in the deformation. Functional principal component analysis is further adopted to model the deformations and PC scores are used as a proxy in modeling the relation between changes in PA and health outcomes and/or interventions. We conduct comprehensive analyses on data from two clinical trials: Reach for Health (RfH) and Metabolism, Exercise and Nutrition at UCSD (MENU), focusing on the effect of interventions on longitudinal changes in PA patterns and how different modes of changes in PA influence weight loss, respectively. The proposed approach reveals unique modes of changes including overall enhanced PA, boosted morning PA, and shifts of active hours specific to each study cohort. The results bring new insights into the study of longitudinal changes in PA and health and have the potential to facilitate designing of effective health interventions and guidelines.

stat.AP↗

arXiv2022

Sedentary Behavior Estimation with Hip-worn Accelerometer Data: Segmentation, Classification and Thresholding

Cohort studies are increasingly using accelerometers for physical activity and sedentary behavior estimation. These devices tend to be less error-prone than self-report, can capture activity throughout the day, and are economical. However, previous methods for estimating sedentary behavior based on hip-worn data are often invalid or suboptimal under free-living situations and subject-to-subject variation. In this paper, we propose a local Markov switching model that takes this situation into account, and introduce a general procedure for posture classification and sedentary behavior analysis that fits the model naturally. Our method features changepoint detection methods in time series and also a two stage classification step that labels data into 3 classes(sitting, standing, stepping). Through a rigorous training-testing paradigm, we showed that our approach achieves > 80% accuracy. In addition, our method is robust and easy to interpret.

cs.LG↗

arXiv2022

Estimating Viral Genetic Linkage Rates in the Presence of Missing Data

Although the interest in the the use of social and information networks has grown, most inferences on networks assume the data collected represents the complete. However, when ignoring missing data, even when missing completely at random, this results in bias for estimators regarding inference network related parameters. In this paper, we focus on constructing estimators for the probability that a randomly selected node has node has at least one edge under the assumption that nodes are missing completely at random along with their corresponding edges. In addition, issues also arise in obtaining asymptotic properties for such estimators, because linkage indicators across nodes are correlated preventing the direct application of the Central Limit Theorem and Law of Large Numbers. Using a subsampling approach, we present an improved estimator for our parameter of interest that accommodates for missing data. Utilizing the theory U-statistics, we derive consistency and asymptotic normality of the proposed estimator. This approach decreases the bias in estimating our parameter of interest. We illustrate our approach using the HIV viral strains from a large cluster-randomized trial of a combination HIV prevention intervention -- the Botswana Combination Prevention Project (BCPP).

stat.ME↗

arXiv2021

Improving Self-supervised Learning with Automated Unsupervised Outlier Arbitration

Our work reveals a structured shortcoming of the existing mainstream self-supervised learning methods. Whereas self-supervised learning frameworks usually take the prevailing perfect instance level invariance hypothesis for granted, we carefully investigate the pitfalls behind. Particularly, we argue that the existing augmentation pipeline for generating multiple positive views naturally introduces out-of-distribution (OOD) samples that undermine the learning of the downstream tasks. Generating diverse positive augmentations on the input does not always pay off in benefiting downstream tasks. To overcome this inherent deficiency, we introduce a lightweight latent variable model UOTA, targeting the view sampling issue for self-supervised learning. UOTA adaptively searches for the most important sampling region to produce views, and provides viable choice for outlier-robust self-supervised learning approaches. Our method directly generalizes to many mainstream self-supervised learning approaches, regardless of the loss's nature contrastive or not. We empirically show UOTA's advantage over the state-of-the-art self-supervised paradigms with evident margin, which well justifies the existence of the OOD sample issue embedded in the existing approaches. Especially, we theoretically prove that the merits of the proposal boil down to guaranteed estimator variance and bias reduction. Code is available: at https://github.com/ssl-codelab/uota.

cs.LG↗

arXiv2020

Efficiency in Lung Transplant Allocation Strategies

Currently in the United States, lung transplantations are allocated to candidates according to the candidates' Lung Allocation Score (LAS). The LAS is an ad-hoc ranking system for patients' priorities of transplantation. The goal of this study is to develop a framework for improving patients' life expectancy over the LAS based on a comprehensive modeling of the lung transplantation waiting list. Patients and organs are modeled as arriving according to Poisson processes, patients' health status evolving a waiting time inhomogeneous Markov process until death or transplantation, with organ recipient's expected post-transplant residual life depending on waiting time and health status at transplantation. Under allocation rules satisfying minimal fairness requirements, the long-term average expected life converges, and its limit is a natural standard for comparing allocation strategies. Via the Hamilton-Jacobi-Bellman equations, upper bounds for the limiting average expected life are derived as a function of organ availability. Corresponding to each upper bound is an allocable set of (time, state) pairs at which patients would be optimally transplanted. The allocable set expands monotonically as organ availability increases, which motivates the development of an allocation strategy that leads to long-term expected life close to the upper bound. Simulation studies are conducted with model parameters estimated from national lung transplantation data. Results suggest that compared to the LAS, the proposed allocation strategy could provide a 7.7% increase in average total life. We further extended the results to the the allocation and matching of multiple organ types.

stat.AP↗

arXiv2018

Extreme Value Analysis Without the Largest Values: What Can Be Done?

In this paper we are concerned with the analysis of heavy-tailed data when a portion of the extreme values is unavailable. This research was motivated by an analysis of the degree distributions in a large social network. The degree distributions of such networks tend to have power law behavior in the tails. We focus on the Hill estimator, which plays a starring role in heavy-tailed modeling. The Hill estimator for this data exhibited a smooth and increasing "sample path" as a function of the number of upper order statistics used in constructing the estimator. This behavior became more apparent as we artificially removed more of the upper order statistics. Building on this observation we introduce a new version of the Hill estimator. It is a function of the number of the upper order statistics used in the estimation, but also depends on the number of unavailable extreme values. We establish functional convergence of the normalized Hill estimator to a Gaussian process. An estimation procedure is developed based on the limit theory to estimate the number of missing extremes and extreme value parameters including the tail index and the bias of Hill's estimator. We illustrate how this approach works in both simulations and real data examples.

math.ST↗