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Jingyuan Li

Publications and source records attributed to Jingyuan Li.

At least 19 recordsLinked to original sources

Let Prompts Bridge Defense Knowledge: Transferable Graph Purification via Vulnerability-Aware GPL

Graph Neural Networks (GNNs) have emerged as a cornerstone for representing complex relational dependencies in diverse multimedia tasks, particularly in cross-platform user interest modeling and cross-modal semantic alignment. In the real world, a practical defense against graph adversarial perturbations is needed. However, we observe that the prevailing adversarial purification methods are essentially domain-restricted defenses, which leads to the following shortcomings: (1) single-domain data provides insufficient structural and semantic diversity for learning robust purification criteria; (2) training of domain-specific defense strategies from scratch consumes substantial computational cost. To address the above limitations, we propose a transferable graph purification scheme, named ProGAP, to bridge adversarial defense knowledge via vulnerability-aware graph prompt learning. Firstly, to capture universal adversarial patterns, a perturbation-capture edge detector is pretrained on data-rich graphs by jointly modeling topological and semantic information. Subsequently, to achieve more knowledge transfer w.r.t. robustness, vulnerability-aware prompts are designed that inject targeted purification guidance into biased nodes, during which the pretrained detector adapts to distribution shifts in downstream graphs without parameter-laborious updates. Experimental results demonstrate that compared with state-of-the-art baselines, our ProGAP achieves 1%-9% improvement, and reduces the time consumption by up to 2.2x. The code for ProGAP is available at https://github.com/Lieyoufffff/ProGAP.

cs.AI

Provenance Before Prose: Claim-Locked Reporting

Large language models (LLMs) can fluently verbalize statistical evidence, yet statistical reports can still drift numerical values, invert effect directions, or restate thresholded contrasts as categorical effects. We frame these failures as a control problem: the evidence-bearing content of a scientific report should be fixed by structured statistical results rather than sampled during prose generation. We therefore use cross-run reproducibility to stress-test whether report-visible numbers and claims are bound before prose generation. Existing controls operate at the text or slot level; a deterministic hybrid template reproduces only 61.1% of report-visible numerical content across seeds because the LLM still selects which findings and numbers the template renders. We propose claim-locked reporting, a provenance-before-prose protocol that fixes the evidence source, numbers, direction, and allowed language strength of each reportable claim before the LLM writes only connective prose. Across fMRI functional-connectivity reporting and randomized controlled trial reporting on Evidence Inference 2.0, claim-locked reporting improves reproducibility over the hybrid template by 37.4 and 20.5 points, respectively. Blinded human audits support the observed direction-preservation and governance trends. In an fMRI cost analysis with DeepSeek, claim-locked reporting also yields the lowest observed token use and median generation latency.

cs.CL

SpeechGym: An Audio-Native Gym for Training Voice Agents via Reinforcement Learning

Voice agents must call tools and hold multi-turn dialogue entirely through speech, yet the dominant paradigm trains them in text. Existing frameworks either cascade TTS and ASR around a proprietary voice API, where gradients cannot flow and per-call cost makes on-policy reinforcement learning prohibitive, or stay in text: they measure voice agents but cannot improve them. We present SpeechGym, an audio-native agentic environment in which two omni-modal models converse in native audio, with no external ASR or TTS and no API boundary, over the unmodified tasks, tools and success check of an established text agentic benchmark, so that the interaction modality is the only variable and the loop stays local and trainable end to end. Audio agentic capability does not follow from audio understanding. The failures speech introduces are perceptual rather than reasoning deficits: the agent picks the right tool and the right argument slot but fills it with a value misheard from the waveform, and that single error cascades into a failed call, a retry of the same call, and a wasted step budget. A second failure is behavioural: under an insistent caller the agent performs an unauthorised write and ends the episode believing it helped. Both are trainable, because the environment labels them for free: a call with a misheard argument fails against the database while a correct one succeeds. The obstacle is sparsity, not signal. Outcome-only GRPO is gradient-starved here, since almost every rollout group fails identically, while a per-turn process reward crediting each successful tool call restores variance to nearly every group. Trained this way, the agent transfers with no further tuning to an independently implemented voice benchmark, more than doubling task success and carrying an open-weights model from last place to second on that leaderboard, while using fewer turns and tokens than before training.

cs.SD

Can We Read the Mind of an Audio LLM? A Verbalizable, Multilingual Middle-Layer Workspace

An audio language model is a black box in a specific way: we see what it says, never what it works out on the way there, and chain-of-thought monitoring helps only if the model writes its reasoning down. Reading a base Qwen3-Omni with a logit lens at the audio-token positions, we find that the answer to a spoken question becomes legible - in words - in the model's middle layers, before it emits any token. Five findings follow. (1) The readout carries concepts in neither the question, the options, nor the model's own transcription: on a clip whose verbatim transcription is empty garbling, it reconstructs Watergate and scandal, passes through the role president, and resolves to Nixon - a hidden multi-hop chain, read with no chain-of-thought. (2) The content is language-agnostic: one audio-inferred concept surfaces in several scripts at once, and 38% of top-1 readouts are Chinese on English inputs. (3) It is paralinguistic: given the same clip as audio and as the model's own emotion-free caption, the audio mind forms the sound source, speaker role, or affect that the caption discards, and answers correctly more often. (4) The audio-driven signal is absent at the input, turns on about a tenth of the way into the network, separates most cleanly from the text prior in the middle band (35-80% of depth), and activation patching shows it is causally used and committed before the last fifth of the layers. (5) Deleting single layers maps the pipeline: reading the sound in is localized to the entry layers and answer delivery to the output layer, while retrieval is distributed across the interior. Throughout, a waveform-swap control - identical text, only the sound changed - isolates the audio-driven signal from a prior over the printed options. This is a qualitative account of what an audio model works out before it speaks: the quantities are controls, not benchmark scores.

cs.SD

EgoBrain: Synergizing Minds and Eyes For Human Action Understanding

The integration of brain-computer interfaces (BCIs), in particular electroencephalography (EEG), with artificial intelligence (AI) has shown tremendous promise in decoding human cognition and behavior from neural signals. In particular, the rise of multimodal AI models have brought new possibilities that have never been imagined before. Here, we present EgoBrain -- the world's first large-scale, temporally aligned multimodal dataset that synchronizes first-person (egocentric) vision and EEG of human brain over extended periods of time, establishing a new paradigm for human-centered behavior analysis. This dataset comprises 61 hours of synchronized 32-channel EEG recordings and first-person video from 40 participants engaged in 29 categories of daily activities. We then developed a multimodal learning framework to fuse EEG and vision for action understanding, validated across both cross-subject and cross-environment challenges, achieving an action recognition accuracy of 66.70%. EgoBrain paves the way toward a unified framework for multimodal and egocentric brain-computer interfaces, bridging neural signals and first-person perception. Our dataset and code are publicly available at: https://huggingface.co/datasets/ut-vision/EgoBrain and https://github.com/ut-vision/EgoBrain .

cs.AI

UNIFUSION: Adapting Autoregressive Language Models into Discrete Diffusion under a Unified Reverse-Rate Objective

Existing methods mainly adapt pretrained autoregressive (AR) language models to masked diffusion, whereas we directly adapt them to uniform-noise diffusion, where every token remains editable during sampling. However, adapting AR checkpoints across corruption kernels remains challenging because existing DLMs use different objectives and prediction parameterizations. We establish connections among SEDD, MDLM/GIDD, M2S, and Neural CTMC by expressing their conditional losses as a single generalized Kullback--Leibler objective over model reverse rates. We further derive conversions from clean-token predictions to concrete-score, posterior-mean, and exit-rate/jump parameterizations, yielding a shared \(x_0\) interface that supports switching between mask and uniform kernels. Building on these connections, we propose \ours{}, a simple continual pre-training approach for directly adapting pretrained GPT2 checkpoints to uniform-noise diffusion. Through systematic evaluation of 124M- and 355M-parameter models, we show that \ours{} steadily improves the trade-off between generative perplexity (GenPPL) and unigram entropy as the sampling budget increases from 16 to 256 steps. At 256 steps, \ours{}-S and \ours{}-M achieve GenPPL/entropy pairs of \(97.783/5.2626\) and \(71.516/5.6669\), respectively; no evaluated model at the same scale simultaneously outperforms \ours{} on both metrics. At both scales, \ours{} also achieves the highest WinoGrande, SIQA, and BBH accuracy among the compared diffusion models.

cs.LG

Mean-to-Score Discrete Diffusion: Posterior-Mean Denoisers for Score Entropy

Score Entropy Discrete Diffusion (SEDD) parameterizes discrete reverse processes with unconstrained positive score ratios. While positivity guarantees nonnegative reverse jump rates, it does not ensure Bayes realizability: ratios at a noisy state need not be jointly induced by any clean-token posterior under the forward kernel. The score-entropy loss has the correct population optimum but does not enforce this constraint away from it. In a trained pure-uniform SEDD checkpoint, roughly one quarter of complete score vectors violate the coordinate box, while more than half lie inside it yet remain materially incompatible with any valid posterior. Such violations can produce negative pre-normalization weights in finite-step sampling. Projecting raw scores onto the bridge polytope removes all observed negative weights and improves external generative PPL from $203.6$ to $175.1$ without changing the sampler. We introduce \emph{mean-to-score} (M2S), which predicts a clean-token posterior mean and converts it to the score through an exact kernel-dependent linear map. The construction applies to any known coordinate-wise continuous-time Markov chain (CTMC) satisfying a mild support condition. For uniform corruption, it maps the probability simplex onto the bridge polytope; for absorbing-mask corruption, the resulting objective recovers MD4 exactly. In a controlled 28.4M-parameter CIFAR-10 comparison, M2S lowers test BPD from $3.173$ to $3.129$ and FID-50k from $\CifarSEDDFID$ to $\CifarMtwoSFID$. A 170M-parameter M2S model trained on about 262B OpenWebText token slots outperforms the evaluated pure-uniform SEDD, GIDD, and Neural CTMC checkpoints at every tested sampling budget, reaching generative PPL $143.3$ at 128 steps versus $183.6$ for the strongest pure-uniform baseline.

cs.LG

OLEDLM: A Unified Language Model for OLED Molecular Design

The development of organic light-emitting diode (OLED) materials faces the compounded challenges of an astronomically large chemical space, stringent quantum-chemical constraints, and a scarcity of labeled data. Although the question of OLED generation is important, few models have been trained effectively for this specific domain. We propose an inverse molecular design framework based on causal language models: given target optoelectronic properties (e.g., excitation energy, oscillator strength), our model directly generates OLED SMILES sequences satisfying the specified constraints. We employ a multi-stage strategy: first, we establish a foundational chemical language model using a LLaMA-style transformer architecture. To the best of our knowledge, this represents the first successful adaptation of LLMs specifically for the OLED domain, bridging the gap between generic molecular generation and the stringent structural requirements of optoelectronic materials. Second, we fine-tune property predictors based on a BERT model pre-trained on our large-scale OLED dataset. Then, we perform Reinforcement Learning on our fine-tuned model, leveraging our property predictor, for better SMILES generation. Finally, through DFT verification, we demonstrate that our framework can efficiently navigate the OLED chemical space, generating novel candidates with high structural validity and optimized optoelectronic properties.

cs.LG

A Two-step Krasnosel'skii-Mann Algorithm with Adaptive Momentum and Its Applications to Image Denoising and Matrix Completion

In this paper, we propose a Two-step Krasnosel'skii-Mann (KM) Algorithm (TKMA) with adaptive momentum for solving convex optimization problems arising in image processing. Such optimization problems can often be reformulated as fixed-point problems for certain operators, which are then solved using iterative methods based on the same operator, including the KM iteration, to ultimately obtain the solution to the original optimization problem. Prior to developing TKMA, we first introduce a KM iteration enhanced with adaptive momentum, derived from geometric properties of an $α$-averaged nonexpansive operator T with $α\in(0,1)$, KM acceleration technique, and information from the composite operator $T^2$. The proposed TKMA is constructed as a convex combination of this adaptive-momentum KM iteration and the Picard iteration of $T^2$. We prove that the sequence generated by TKMA converges weakly to a fixed point of T in a real Hilbert space. Moreover, under $α\in(0,1/2]$ and specific assumptions on the adaptive momentum parameters, we prove that the algorithm achieves an $o\left(1/\sqrt{k}\right)$ convergence rate in terms of the distance between successive iterates. Numerical experiments demonstrate that TKMA outperforms the FPPA, PGA, Fast KM algorithm, and Halpern algorithm on tasks such as image denoising and low-rank matrix completion.

math.OC

Measuring Research Difficulty of Academic Papers: A Case Study in Natural Language Processing

With the rapid growth of the number of academic papers, systematically evaluating the difficulty of research and its relationship to academic impact offers important significance for research topic selection and resource allocation. However, current studies lack quantitative assessments of research difficulty and its correlation with academic impact. This paper proposes a comprehensive evaluation system for research difficulty, incorporating factors such as academic collaboration, content, and references. Taking the field of Natural Language Processing (NLP) as a case study, we extract both internal and external features from academic papers, compute multiple research difficulty indicators. We assign their weights using the entropy weight method and perform a weighted sum to obtain the research difficulty score of academic papers. This paper uses the citation frequency of academic papers to measure academic impact. To validate our approach, NLP experts assessed the difficulty of a sample of papers, and correlation analyses confirmed the reliability of our measurement. Empirical results reveal that in NLP, factors such as the number of pages, reference count, and participation of high-level institutions are significantly associated with academic impact. Moreover, we identify an inverted U-shaped relationship between research difficulty and academic impact. It suggests that moderately difficult research tends to achieve greater academic impact.

cs.DL

A Kernel-Clean Lean Mechanization of Classical Lottery in Action and the Wakker--Debreu--Koopmans Representation Layer

We present a Lean 4/Mathlib formalization of the additive representation theory behind Classical Lottery in Action and the Wakker-Debreu-Koopmans (WDK) layer it relies on. Our central result is a machine-checked proof that the cross-pair Thomsen / double-cancellation (hexagon) condition is irreducible from the ordinal axioms of additive conjoint measurement (weak order, restricted solvability, Archimedean condition, and tradeoff consistency). We exhibit an explicit verified counter-model (additiveRealBoolPref) satisfying all ordinal axioms yet failing the cross-pair condition, with every strict standard sequence being an arithmetic progression and hence non-dense. Around this boundary we mechanize the full derivable construction: continuous Debreu/Eilenberg utility from separability, standard-sequence grids, bisection methods from connectedness, and global additive gluing. All public theorems are sorry-free conditional wrappers over this single irreducible structural input. The development is kernel-clean, depending only on standard Lean foundations (propext, Classical.choice, Quot.sound). The companion file ClassicalLotteryInAction.lean formalizes local classical-lottery constructions, average-utility results, matching-frequency lemmas, and ambiguity-attitude statements used by the Management Science paper. This draws a precise, machine-certified line between what additive conjoint measurement can prove and what it must assume.

cs.LO

LabBuilder: Protocol-Grounded 3D Layout Generation for Interactable and Safe Laboratory

Automated laboratories hold the promise of accelerating scientific discovery, yet their deployment is bottlenecked by the difficulty of designing safe and executable environments. While simulator-based design offers scalability, existing 3D scene generation methods are primarily tailored for household settings, optimizing for visual plausibility while neglecting the protocol grounding and layout-level safety constraints essential for scientific experimentation. We present LabBuilder, an end-to-end system that generates and verifies 3D laboratory layouts from concise textual specifications. It operates through three tightly coupled components: LabForge first curates a meta-dataset of annotated assets and chemical knowledge, translating natural language specifications into structured protocols; building on these protocols, LabGen synthesizes laboratory layouts via an iterative, constraint-aware optimization strategy; finally, LabTouchstone evaluates the resulting layouts as a unified benchmark. Extensive experiments demonstrate that LabBuilder significantly outperforms existing state-of-the-art methods, producing laboratory environments that are realistic and valid under modeled geometric, chemical-safety, and navigation constraints.

cs.CV

A cross-species neural foundation model for end-to-end speech decoding

Speech brain-computer interfaces (BCIs) aim to restore communication for people with paralysis by translating neural activity into text. Most systems use cascaded frameworks that decode phonemes before assembling sentences with an n-gram language model (LM), preventing joint optimization of all stages simultaneously. Here, we introduce an end-to-end BraIn-to-Text (BIT) framework that translates neural activity into coherent sentences using a single differentiable neural network. Central to our approach is a cross-task, cross-species pretrained neural encoder, whose representations transfer to both attempted and imagined speech. In a cascaded setting with an n-gram LM, the pretrained encoder establishes a new state-of-the-art (SOTA) on the Brain-to-Text '24 and '25 benchmarks. Integrated end-to-end with audio large language models (LLMs) and trained with contrastive learning for cross-modal alignment, BIT reduces the word error rate (WER) of the prior end-to-end method from 24.69% to 10.22%. Notably, we find that small-scale audio LLMs markedly improve end-to-end decoding. Beyond record-setting performance, BIT aligns attempted and imagined speech embeddings to enable cross-task generalization. Altogether, our approach advances the integration of large, diverse neural datasets, paving the way for an end-to-end decoding framework that supports seamless, differentiable optimization.

cs.CL

Neural Continuous-Time Markov Chain: Discrete Diffusion via Decoupled Jump Timing and Direction

Discrete diffusion models based on continuous-time Markov chains (CTMCs) have shown strong performance on language and discrete data generation, yet existing approaches typically parameterize the reverse rate matrix monolithically -- through proxies such as concrete scores (SEDD) or clean-data predictions (MDLM, GIDD) -- rather than aligning the parameterization with the intrinsic CTMC decomposition into jump timing and jump direction. We propose \textbf{Neural CTMC}, which exploits the underlying Poisson structure of CTMC dynamics by separately parameterizing the reverse process through an \emph{exit rate} (when to jump) and a \emph{jump distribution} (where to jump) via two dedicated network heads. We show that the evidence lower bound (ELBO) reduces to a path-space KL divergence between the true and learned reverse processes that factorizes into a Poisson KL for timing and a categorical KL for direction, and admits a tractable, gradient-equivalent and consistent loss. Experimentally, scored by Gemma2-9B, our pure-uniform Neural CTMC achieves $16.36$ generative perplexity on TinyStories (vs.\ GIDD $37.60$ and MDLM $42.66$). On OpenWebText, it attains the best perplexity at the same training-token budget across 16--128 sampling steps among the methods we compare (e.g., at 128 steps: Neural CTMC $183.6$ vs.\ MDLM $210.5$ and GIDD $249.8$). To facilitate reproducibility, we release our pretrained weights at https://huggingface.co/Jiangxy1117/Neural-CTMC.

cs.LG

Regulating oxygen content and superconductivity in La$_3$Ni$_2$O$_{7+δ}$

The synthesis of high-quality Ruddlesden-Popper (RP) nickelates remains challenging due to variations in oxygen content and the prevalence of intergrown RP phases. Precisely controlling the stoichiometry and characterizing the resulting physical properties are essential for understanding the mechanism of high-$T_c$ superconductivity in these materials. In this work, we synthesize a series of La$_3$Ni$_2$O$_{7+δ}$ samples with systematically controlled oxygen content and perform comprehensive structural and compositional analyses. Precise oxygen tuning enables us to tailor the microstructure, yielding a pure bilayer phase, a mixture of bilayer and hybrid single-layer-bilayer phases, and a predominantly bilayer phase containing trilayer intergrowths. High-pressure transport measurements reveal distinct superconducting transitions with contrasting $T_c$ values, corresponding to the bilayer phase, the hybrid phase, and trilayer inclusions. Notably, we find that oxygen content not only governs the phase purity$-$i.e., the presence of intergrowth phases$-$but also directly modulates the upper critical field ($H_{c2}$) of the bilayer superconductivity. By establishing a phase diagram of $T_c$ and $H_{c2}$ as functions of oxygen content in La$_3$Ni$_2$O$_{7+δ}$, this work advances synthetic control and provides new insights into the superconducting mechanism of RP nickelates.

cond-mat.supr-con

Coarse-Grained Dynamics with Spatial Disorder and Non-Markovian Memory

We introduce the spatial disorder-generalized Langevin equation (SD-GLE), a data-driven method for constructing coarse-grained (CG) dynamics in heterogeneous systems. Unlike conventional CG approaches that rely on a mean-field potential, SD-GLE utilizes a variational Bayesian framework with a random field prior to explicitly disentangle static spatial disorder from viscoelastic friction. Numerical results demonstrate the limits of standard GLEs, whereas SD-GLE accurately extrapolates long-time dynamics to capture the anomalous diffusion crossover from short trajectories and recover the ensemble statistical properties inherent to the disordered nature of these systems.

physics.comp-ph

Reasoning as Gradient: Scaling MLE Agents Beyond Tree Search

LLM-based agents for machine learning engineering (MLE) predominantly rely on tree search, a form of gradient-free optimization that uses scalar validation scores to rank candidates. As LLM reasoning capabilities improve, exhaustive enumeration becomes increasingly inefficient compared to directed updates, analogous to how accurate gradients enable efficient descent over random search. We introduce Gome, an MLE agent that operationalizes gradient-based optimization. Gome maps structured diagnostic reasoning to gradient computation, success memory to momentum, and multi-trace execution to distributed optimization. Under a closed-world protocol that isolates architectural effects from external knowledge, Gome achieves a state-of-the-art 35.1\% any-medal rate on MLE-Bench with a restricted 12-hour budget on a single V100 GPU. Scaling experiments across 10 models reveal a critical crossover: with weaker models, tree search retains advantages by compensating for unreliable reasoning through exhaustive exploration; as reasoning capability strengthens, gradient-based optimization progressively outperforms, with the gap widening at frontier-tier models. Given the rapid advancement of reasoning-oriented LLMs, this positions gradient-based optimization as an increasingly favorable paradigm. We release our codebase and GPT-5 traces at https://github.com/microsoft/RD-Agent.

cs.LG

Discovery of Interpretable Physical Laws in Materials via Language-Model-Guided Symbolic Regression

Discovering interpretable physical laws from high-dimensional data is a fundamental challenge in scientific research. Traditional methods, such as symbolic regression, often produce complex, unphysical formulas when searching a vast space of possible forms. We introduce a framework that guides the search process by leveraging the embedded scientific knowledge of large language models, enabling efficient identification of physical laws in the data. We validate our approach by modeling key properties of perovskite materials. Our method mitigates the combinatorial explosion commonly encountered in traditional symbolic regression, reducing the effective search space by a factor of approximately $10^5$. A set of novel formulas for bulk modulus, band gap, and oxygen evolution reaction activity are identified, which not only provide meaningful physical insights but also outperform previous formulas in accuracy and simplicity.

physics.comp-ph