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Jingzhi Chen

Publications and source records attributed to Jingzhi Chen.

6 recordsLinked to original sources

Decoupling semantics from vision: A framework for faithful visual-text compression evaluation

Recent visual-text compression (VTC) methods, typified by DeepSeek-OCR, report impressive high token compression ratios for long-context modeling tasks by leveraging text-to-image rendering. However, existing evaluation protocols heavily rely on downstream task performance. Such evaluation metrics fail to accurately measure text preservation due to the strong inherent linguistic priors of Multimodal Large Language Models (MLLMs). In this work, we introduce a new evaluation framework that decouples MLLMs' capabilities to faithfully assess VTC quality. Within this framework, we further introduce the ZeroSense Benchmark to ensure low semantic correlation of testing samples. By eliminating textual dependencies, our benchmark guarantees that the evaluation results are purely reflective of VTC quality, unaffected by the semantic inference capabilities of downstream models. Extensive experiments across multiple datasets demonstrate that VTC quality and downstream task accuracy diverge significantly, highlighting the necessity of our decoupled evaluation framework.

cs.CV↗

PathSelect: Sequential Token Selection for Whole Slide Pathology

Gigapixel Whole-Slide Images (WSIs) present a fundamental computational bottleneck for vision-language models (VLMs) due to extreme sequence lengths. Existing approaches predominantly rely on spatial sampling or training-free pruning, which risk diluting weak but informative signals, leading to the loss of critical diagnostic evidence due to the spatially diffuse nature of pathological cues. We reformulate WSI token pruning as a sequential selection process, enabling the model to autonomously learn an optimal routing strategy rather than relying on static heuristics. We herein propose a decoupled routing framework integrated as an active plugin into the fully pre-trained SlideChat base model, leaving both the slide encoder and large language model frozen. To provide continuous gradients for the non-differentiable pruning operation during training, we introduce PathSelect. PathSelect employs a variance-preserving noise gate to modulate each patch's information flow via a differentiable Soft Top-K operator, paired with a diagonal-attention Denoiser that recovers the perturbed representations without semantic leakage. At inference, the PathSelect module is entirely detached. Relying solely on the trained Scorer, a deterministic Hard Top-K operator executes adaptive, data-dependent trajectory termination, significantly accelerating downstream generative processing with exceptionally low sequential token selection latency. Driven by an empirical average of only 44.86 tokens under a maximum constraint of K = 128, our framework achieves 74.00% overall accuracy on SlideBench (TCGA), representing an approximate 36.6x spatial token reduction relative to the uncompressed baseline average while consistently outperforming sampling-based counterparts.

cs.CV↗

Learnable Token Sparsification for Efficient Gigapixel Whole Slide Image Reasoning

The processing of gigapixel whole slide images within vision language models faces a major difficulty due to an excessive number of visual tokens. Existing solutions typically rely on spatial downsampling or heuristic pruning strategies that operate without training, and these methods often discard subtle but clinically meaningful patterns because pathological evidence is scattered irregularly across the tissue. To overcome this limitation, we reformulate token reduction in whole slide images as a trainable sparsification problem, allowing the model to learn an optimal selection strategy instead of following fixed heuristics. We propose a decoupled routing architecture. To enable gradient propagation through the nondifferentiable pruning operation during training, we introduce a component called SparseLearn. This component uses a variance-preserving noise gate that regulates the information flow of each patch via a differentiable Soft Top-K operator, together with a diagonal attention denoiser that recovers perturbed representations without leaking spatial information. At inference time, the SparseLearn module is entirely discarded, and the trained scorer applies a deterministic Hard Top-K operator to keep only the highest scoring 32 tokens, incurring no extra computation. By compressing the visual sequence down to a sparse set of just 32 tokens, which represents as little as 0.78% of the original length, our framework achieves 73.32% overall accuracy on SlideBench (TCGA), consistently surpassing sampling-based baselines and general-purpose vision language models. It also demonstrates strong zero shot generalization on SlideBench (BCNB) and WSI VQA*. By resolving the visual context bottleneck and preventing the dilution of sparse diagnostic evidence, this work provides a highly efficient paradigm for end to end gigapixel whole slide image reasoning.

cs.CV↗

From Snapshots to Symphonies: The Evolution of Protein Prediction from Static Structures to Generative Dynamics and Multimodal Interactions

The protein folding problem has been fundamentally transformed by artificial intelligence, evolving from static structure prediction toward the modeling of dynamic conformational ensembles and complex biomolecular interactions. This review systematically examines the paradigm shift in AI driven protein science across five interconnected dimensions: unified multimodal representations that integrate sequences, geometries, and textual knowledge; refinement of static prediction through MSA free architectures and all atom complex modeling; generative frameworks, including diffusion models and flow matching, that capture conformational distributions consistent with thermodynamic ensembles; prediction of heterogeneous interactions spanning protein ligand, protein nucleic acid, and protein protein complexes; and functional inference of fitness landscapes, mutational effects, and text guided property prediction. We critically analyze current bottlenecks, including data distribution biases, limited mechanistic interpretability, and the disconnect between geometric metrics and biophysical reality, while identifying future directions toward physically consistent generative models, multimodal foundation architectures, and experimental closed loop systems. This methodological transformation marks artificial intelligence's transition from a structural analysis tool into a universal simulator capable of understanding and ultimately rewriting the dynamic language of life.

cs.CV↗

ZeroSense:How Vision matters in Long Context Compression

Recent visual-text compression (VTC) methods, typified by DeepSeek-OCR, report impressive high token compression ratios for long-context modeling tasks by leveraging text-to-image rendering. However, existing evaluation protocols heavily rely on downstream task performance. Such evaluation metrics fail to accurately measure text preservation due to the strong inherent linguistic priors of Multimodal Large Language Models (MLLMs). In this work, we introduce a new evaluation framework that decouples MLLMs' capabilities to faithfully assess VTC quality. Within this framework, we further introduce the ZeroSense Benchmark to ensure low semantic correlation of testing samples. By eliminating contextual dependencies, our benchmark guarantees that the evaluation results are purely reflective of VTC quality, unaffected by the semantic inference capabilities of downstream models. Extensive experiments across multiple datasets demonstrate that VTC quality and downstream task accuracy diverge significantly, highlighting the necessity of our decoupled evaluation framework.

cs.CV↗

Mott insulating phase and coherent-incoherent crossover across magnetic phase transition in 2D antiferromagnetic CrSBr

In two-dimensional van der Waals magnetic materials, the interplay between magnetism and electron correlation can give rise to new ground states and lead to novel transport and optical properties. A fundamental question in these materials is how the electron correlation manifests and interacts with the magnetic orders. In this study, we demonstrate that the recently discovered 2D antiferromagnetic material, CrSBr, is a Mott insulator, through the combined use of resonant and temperature-dependent angle-resolved photoemission spectroscopy techiniques, supplemented by dynamical mean-field theory analysis. Intriguingly, we found that as the system transitions from the antiferromagnetic to the paramagnetic phases, its Mott bands undergo a reconfiguration, and a coherent-incoherent crossover, driven by the dissolution of the magnetic order. Our findings reveal a distinctive evolution of band structure associated with magnetic phase transitions, shedding light on the investigation of intricate interplay between correlation and magnetic orders in strongly correlated van der Waals magnetic materials.

cond-mat.str-el↗