Jinwoong Chae | Searcharxiv

arXiv2026

Coarse-grained graph architectures for all-atom force predictions

We introduce a machine-learning framework termed coarse-grained all-atom force field (CGAA-FF), which incorporates coarse-grained message passing within an all-atom force field using equivariant nature of graph models. The CGAA-FF model employs grain embedding to encode atomistic coordinates into nodes representing grains rather than individual atoms, enabling predictions of both grain-level energies and atom-level forces. Tested on EC/EMC organic electrolytes and RDX crystalline and disordered phases, CGAA-FF achieves 0.201 and 0.253 eV A-1, respectively, while providing about 10-fold and 5-fold higher computational speed and memory efficiency, respectively, than conventional MLIPs. Since this CGAA framework can be integrated into any equivariant architecture, we believe this work opens the door to efficient all-atom simulations of soft-matter systems.

cond-mat.mtrl-sci↗

arXiv2025

CNN-based TEM image denoising from first principles

Transmission electron microscope (TEM) images are often corrupted by noise, hindering their interpretation. To address this issue, we propose a deep learning-based approach using simulated images. Using density functional theory calculations with a set of pseudo-atomic orbital basis sets, we generate highly accurate ground truth images. We introduce four types of noise into these simulations to create realistic training datasets. Each type of noise is then used to train a separate convolutional neural network (CNN) model. Our results show that these CNNs are effective in reducing noise, even when applied to images with different noise levels than those used during training. However, we observe limitations in some cases, particularly in preserving the integrity of circular shapes and avoiding visible artifacts between image patches. To overcome these challenges, we propose alternative training strategies and future research directions. This study provides a valuable framework for training deep learning models for TEM image denoising.

cond-mat.mtrl-sci↗