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Joaquín Mura

Publications and source records attributed to Joaquín Mura.

3 recordsLinked to original sources

Unsupervised 4D Flow MRI Velocity Enhancement and Unwrapping Using Divergence-Free Neural Networks

This work introduces an unsupervised Divergence and Aliasing-Free neural network (DAF-FlowNet) for 4D Flow Magnetic Resonance Imaging (4D Flow MRI) that jointly enhances noisy velocity fields and corrects phase wrapping artifacts. DAF-FlowNet parameterizes velocities as the curl of a vector potential, enforcing mass conservation by construction and avoiding explicit divergence-penalty tuning. A cosine data-consistency loss enables simultaneous denoising and unwrapping from wrapped phase images. On synthetic aortic 4D Flow MRI generated from computational fluid dynamics, DAF-FlowNet achieved lower errors than existing techniques (up to 11% lower velocity normalized root mean square error, 11% lower directional error, and 44% lower divergence relative to the best-performing alternative across noise levels), with robustness to moderate segmentation perturbations. For unwrapping, at peak velocity/velocity-encoding ratios of 1.4 and 2.1, DAF-FlowNet achieved 0.18% and 5.2% residual wrapped voxels, representing reductions of 72% and 18% relative to the best alternative method, respectively. In scenarios with both noise and aliasing, the proposed single-stage formulation outperformed a state-of-the-art sequential pipeline (up to 15% lower velocity normalized root mean square error, 11% lower directional error, and 28% lower divergence). Across 10 hypertrophic cardiomyopathy patient datasets, DAF-FlowNet preserved fine-scale flow features, corrected aliased regions, and improved internal flow consistency, as indicated by reduced inter-plane flow bias in aortic and pulmonary mass-conservation analyses recommended by the 4D Flow MRI consensus guidelines. These results support DAF-FlowNet as a framework that unifies velocity enhancement and phase unwrapping to improve the reliability of cardiovascular 4D Flow MRI.

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A stabilized total pressure-formulation of the Biot's poroelasticity equations in frequency domain: numerical analysis and applications

This work focuses on the numerical solution of the dynamics of a poroelastic material in the frequency domain. We provide a detailed stability analysis based on the application of the Fredholm alternative in the continuous case, considering a total pressure formulation of the Biot's equations. In the discrete setting, we propose a stabilized equal order finite element method complemented by an additional pressure stabilization to enhance the robustness of the numerical scheme with respect to the fluid permeability. Utilizing the Fredholm alternative, we extend the well-posedness results to the discrete setting, obtaining theoretical optimal convergence for the case of linear finite elements. We present different numerical experiments to validate the proposed method. First, we consider model problems with known analytic solutions in two and three dimensions. As next, we show that the method is robust for a wide range of permeabilities, including the case of discontinuous coefficients. Lastly, we show the application for the simulation of brain elastography on a realistic brain geometry obtained from medical imaging.

math.NA↗

A hybrid PML formulation for the 2D three-field dynamic poroelastic equations

Simulation of wave propagation in poroelastic half-spaces presents a common challenge in fields like geomechanics and biomechanics, requiring Absorbing Boundary Conditions (ABCs) at the semi-infinite space boundaries. Perfectly Matched Layers (PML) are a popular choice due to their excellent wave absorption properties. However, PML implementation can lead to problems with unknown stresses or strains, time convolutions, or PDE systems with Auxiliary Differential Equations (ADEs), which increases computational complexity and resource consumption. This article presents two new PML formulations for arbitrary poroelastic domains. The first formulation is a fully-mixed form that employs time-history variables instead of ADEs, reducing the number of unknowns and mathematical operations. The second formulation is a hybrid form that restricts the fully-mixed formulation to the PML domain, resulting in smaller matrices for the solver while preserving governing equations in the interior domain. The fully-mixed formulation introduces three scalar variables over the whole domain, whereas the hybrid form confines them to the PML domain. The proposed formulations were tested in three numerical experiments in geophysics using realistic parameters for soft sites with free surfaces. The results were compared with numerical solutions from extended domains and simpler ABCs, such as paraxial approximation, demonstrating the accuracy, efficiency, and precision of the proposed methods. The article also discusses the applicability of these methods to complex media and their extension to the Multiaxial PML formulation. The codes for the simulations are available for download from \url{https://github.com/hmella/POROUS-HYBRID-PML}.

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