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Johannes Burge

Publications and source records attributed to Johannes Burge.

4 recordsLinked to original sources

Supervised Quadratic Feature Analysis: Information Geometry Approach for Dimensionality Reduction

Supervised dimensionality reduction maps labeled data into a low-dimensional feature space while preserving class separation. A common strategy is to learn features that maximize a measure of statistical dissimilarity between the class-conditional probability distributions. Information geometry, which is rooted in Riemannian geometry, provides an alternative framework for measuring class dissimilarity. It treats probability distributions as points in a statistical manifold and uses the Fisher information metric to define a geodesic distance--the Fisher-Rao distance--between distributions The Fisher-Rao distance is an appealing candidate for measuring class separation because the Fisher information metric is a local measure of discriminability, and because it allows a geometric interpretation. Here, we present Supervised Quadratic Feature Analysis (SQFA), a supervised dimensionality reduction method which learns linear features that maximize Fisher-Rao distances between class-conditional distributions, under Gaussian assumptions. In multiple real world datasets, we find that SQFA features support classification accuracy that is competitive with features that maximize more popular measures of dissimilarity, or that are learned by other state-of-the-art dimensionality reduction methods. Notably, the best classification accuracy is achieved by SQFA-H features, a variant of SQFA that maximizes the Hellinger distance, a rarely used objective for dimensionality reduction. These results demonstrate the potential of information geometry as a tool for supervised dimensionality reduction. We provide a Python implementation of SQFA at https://github.com/dherrera1911/sqfa.

stat.ML

Bandwidth of Gamma-Distribution-Shaped Functions via Lambert W Function

The full width at half maximum (FWHM) is a useful quantity for characterizing the bandwidth of unimodal functions. However, a closed-form expression for the FWHM of gamma-shaped functions-i.e. functions that are shaped like the gamma distribution probability density function (PDF)-is not widely available. Here, we derive and present just such an expression. To do so, we use the Lambert W function to compute the inverse of the gamma PDF. We use this inverse to derive an exact analytic expression for the width of a gamma distribution at an arbitrary proportion of the maximum, from which the FWHM follows trivially. (An expression for the octave bandwidth of gamma-shaped functions is also provided.) The FWHM is then compared to the Gaussian approximation of gamma-shaped functions. A few other related issues are discussed.

eess.SP

Projected Normal Distribution: Moment Approximations and Generalizations

The projected normal distribution, also known as the angular Gaussian distribution, is obtained by dividing a multivariate normal random variable $\mathbf{x}$ by its norm $\sqrt{\mathbf{x}^T \mathbf{x}}$. The resulting random variable follows a distribution on the unit sphere. No closed-form formulas for the moments of the projected normal distribution are known, which can limit its use in some applications. In this work, we derive analytic approximations to the first and second moments of the projected normal distribution using Taylor expansions and using results from the theory of quadratic forms of Gaussian random variables. Then, motivated by applications in systems neuroscience, we present generalizations of the projected normal distribution that divide the variable $\mathbf{x}$ by a denominator of the form $\sqrt{\mathbf{x}^T \mathbf{B} \mathbf{x} + c}$, where $\mathbf{B}$ is a symmetric positive definite matrix and $c$ is a non-negative number. We derive moment approximations as well as the density function for these other projected distributions. We show that the moments approximations are accurate for a wide range of dimensionalities and distribution parameters. Furthermore, we show that the moments approximations can be used to fit these distributions to data through moment matching. These moment matching methods should be useful for analyzing data across a range of applications where the projected normal distribution is used, and for applying the projected normal distribution and its generalizations to model data in neuroscience.

stat.ME

Cameras a Million Miles Apart: Stereoscopic Imaging Potential with the Hubble and James Webb Space Telescopes

The two most powerful optical/IR telescopes in history -- NASA's Hubble and James Webb Space Telescopes -- will be in space at the same time. We have a unique opportunity to leverage the 1.5 million kilometer separation between the two telescopic nodal points to obtain simultaneously captured stereoscopic images of asteroids, comets, moons and planets in our Solar System. Given the recent resurgence in stereo-3D movies and the recent emergence of VR-enabled mobile devices, these stereoscopic images provide a unique opportunity to engage the public with unprecedented views of various Solar System objects. Here, we present the technical requirements for acquiring stereoscopic images of Solar System objects, given the constraints of the telescopic equipment and the orbits of the target objects, and we present a handful of examples.

astro-ph.IM