arXiv subjects

John Klepeis

Publications and source records attributed to John Klepeis.

3 recordsLinked to original sources

arXiv2026

A probabilistic framework for crystal structure denoising, phase classification, and order parameters

Atomistic simulations generate large volumes of noisy structural data, yet extracting phase labels and continuous order parameters (OPs) in a robust and general manner remains challenging. Existing tools are often specialized to a limited set of prototypes and split thermal-noise removal, phase classification, and OP construction into separate steps. Here we present a unified probabilistic framework for analyzing noisy atomic configurations with respect to known crystal prototypes. The model predicts per-atom, per-prototype logits and aggregates them into a scalar log-probability (logP) landscape over atomic coordinates. Its gradient defines a conservative denoising field, while the logits provide local phase labels, prototype-resolved OPs, and ambiguity measures through logit margins. We train on AFLOW-mapped crystalline structures from the Materials Project with synthetic positional and elastic perturbations, then test extrapolation to stronger noise, finite-temperature disorder, point defects, water--ice coexistence, binary polymorphs, and shock-compressed Ti. A single differentiable scalar model recovers prototype identity after denoising, tracks smooth transformations such as Bain and Burgers paths, and exposes low-confidence regions near defects and phase boundaries. This provides an integrated and extensible tool for analyzing complex atomistic simulations.

cond-mat.mtrl-sci↗

arXiv2026

Learning noisy phase transition dynamics from stochastic partial differential equations

The non-equilibrium dynamics of mesoscale phase transitions are fundamentally shaped by thermal fluctuations, which not only seed instabilities but actively control kinetic pathways, including rare barrier-crossing events such as nucleation that are entirely inaccessible to deterministic models. Machine-learning surrogates for such systems must therefore represent stochasticity explicitly, enforce conservation laws by construction, and expose physically interpretable structure. We develop physics-aware surrogate models for the stochastic Cahn-Hilliard equation in 3D that satisfy all three requirements simultaneously. The key innovation is to parameterize the surrogate at the level of inter-cell fluxes, decomposing each flux into a deterministic mobility-weighted chemical-potential gradient and a learnable noise amplitude. This design guarantees exact mass conservation at every step and adds physical fluctuations to inter-cell mass transport. A learnable free energy functional provides thermodynamic interpretability, validated by independent recovery of the bulk double-well landscape, interfacial excess energy, and curvature-independent interfacial tension. Tests demonstrate accurate reproduction of ensemble statistics and noise-accelerated coarsening, with generalization to spatial domains 64 times larger in volume and temporal horizons 160x longer than those seen during training. Critically, the stochastic surrogate captures thermally activated nucleation in the metastable regime, a qualitative capability that no deterministic surrogate can provide regardless of training, thus establishing flux-level stochasticity as an architectural necessity rather than an optional enhancement.

physics.comp-ph↗

arXiv2020

Comparison of ablators for the polar direct drive exploding pusher platform

We examine the performance of pure boron, boron carbide, high density carbon, and boron nitride ablators in the polar direct drive exploding pusher (PDXP) platform. The platform uses the polar direct drive configuration at the National Ignition Facility to drive high ion temperatures in a room temperature capsule and has potential applications for plasma physics studies and as a neutron source. The higher tensile strength of these materials compared to plastic enables a thinner ablator to support higher gas pressures, which could help optimize its performance for plasma physics experiments, while ablators containing boron enable the possiblity of collecting addtional data to constrain models of the platform. Applying recently developed and experimentally validated equation of state models for the boron materials, we examine the performance of these materials as ablators in 2D simulations, with particular focus on changes to the ablator and gas areal density, as well as the predicted symmetry of the inherently 2D implosion.

physics.comp-ph↗