arXiv subjects

John Lafferty

Publications and source records attributed to John Lafferty.

At least 19 recordsLinked to original sources

arXiv2026

Uncovering Latent Reasoning Strategies in Language Models

A language model $p_\theta(y \mid x)$ trained on reasoning tasks learns to solve problems via multiple distinct strategies, yet these strategies are implicit and entangled within the model's response distribution. We study the problem of decomposing the response distribution of a given pretrained language model into a structured, strategy-conditioned representation. Specifically, we learn a latent-variable factorization $p_\theta(y \mid x) \leadsto (r_\phi(z \mid x), g_\phi(y \mid x,z))$, where a router $r$ maps each input to a distribution over latent strategies $z$ and a generator $g$ produces the response conditioned on that strategy. A key challenge is that the generator, initialized from the base model, already represents $p_\theta(y \mid x)$ without using $z$. Standard variational inference therefore gives the model no incentive to route information through $z$ and can yield a severe form of posterior collapse. To address this, we propose a variational objective that measures fractional information gain relative to the base model's response loss and concentrates reconstruction pressure on tokens with high base model surprisal, encouraging $z$ to encode strategy-relevant response variation. We introduce a benchmark of multi-strategy algorithmic tasks and show that this objective recovers latent codes aligned with distinct reference strategies while preserving the base model's response distribution.

cs.LG↗

arXiv2025

Confidence Intervals for Linear Models with Arbitrary Noise Contamination

We study confidence interval construction for linear regression under Huber's contamination model, where an unknown fraction of noise variables is arbitrarily corrupted. While robust point estimation in this setting is well understood, statistical inference remains challenging, especially because the contamination proportion is not identifiable from the data. We develop a new algorithm that constructs confidence intervals for individual regression coefficients without any prior knowledge of the contamination level. Our method is based on a Z-estimation framework using a smooth estimating function. The method directly quantifies the uncertainty of the estimating equation after a preprocessing step that decorrelates covariates associated with the nuisance parameters. We show that the resulting confidence interval has valid coverage uniformly over all contamination distributions and attains an optimal length of order $O(1/\sqrt{n(1-\epsilon)^2})$, matching the rate achievable when the contamination proportion $\epsilon$ is known. This result stands in sharp contrast to the adaptation cost of robust interval estimation observed in the simpler Gaussian location model.

math.ST↗

arXiv2025

Unlocking Out-of-Distribution Generalization in Transformers via Recursive Latent Space Reasoning

Systematic, compositional generalization beyond the training distribution remains a core challenge in machine learning -- and a critical bottleneck for the emergent reasoning abilities of modern language models. This work investigates out-of-distribution (OOD) generalization in Transformer networks using a GSM8K-style modular arithmetic on computational graphs task as a testbed. We introduce and explore a set of four architectural mechanisms aimed at enhancing OOD generalization: (i) input-adaptive recurrence; (ii) algorithmic supervision; (iii) anchored latent representations via a discrete bottleneck; and (iv) an explicit error-correction mechanism. Collectively, these mechanisms yield an architectural approach for native and scalable latent space reasoning in Transformer networks with robust algorithmic generalization capabilities. We complement these empirical results with a detailed mechanistic interpretability analysis that reveals how these mechanisms give rise to robust OOD generalization abilities.

cs.LG↗

arXiv2025

Information-Computation Tradeoffs for Noiseless Linear Regression with Oblivious Contamination

We study the task of noiseless linear regression under Gaussian covariates in the presence of additive oblivious contamination. Specifically, we are given i.i.d.\ samples from a distribution $(x, y)$ on $\mathbb{R}^d \times \mathbb{R}$ with $x \sim \mathcal{N}(0,\mathbf{I}_d)$ and $y = x^\top \beta + z$, where $z$ is drawn independently of $x$ from an unknown distribution $E$. Moreover, $z$ satisfies $\mathbb{P}_E[z = 0] = \alpha>0$. The goal is to accurately recover the regressor $\beta$ to small $\ell_2$-error. Ignoring computational considerations, this problem is known to be solvable using $O(d/\alpha)$ samples. On the other hand, the best known polynomial-time algorithms require $\Omega(d/\alpha^2)$ samples. Here we provide formal evidence that the quadratic dependence in $1/\alpha$ is inherent for efficient algorithms. Specifically, we show that any efficient Statistical Query algorithm for this task requires VSTAT complexity at least $\tilde{\Omega}(d^{1/2}/\alpha^2)$.

cs.DS↗

arXiv2025

CoT Information: Improved Sample Complexity under Chain-of-Thought Supervision

Learning complex functions that involve multi-step reasoning poses a significant challenge for standard supervised learning from input-output examples. Chain-of-thought (CoT) supervision, which provides intermediate reasoning steps together with the final output, has emerged as a powerful empirical technique, underpinning much of the recent progress in the reasoning capabilities of large language models. This paper develops a statistical theory of learning under CoT supervision. A key characteristic of the CoT setting, in contrast to standard supervision, is the mismatch between the training objective (CoT risk) and the test objective (end-to-end risk). A central part of our analysis, distinguished from prior work, is explicitly linking those two types of risk to achieve sharper sample complexity bounds. This is achieved via the *CoT information measure* $\mathcal{I}_{\mathcal{D}, h_\star}^{\mathrm{CoT}}(\epsilon; \calH)$, which quantifies the additional discriminative power gained from observing the reasoning process. The main theoretical results demonstrate how CoT supervision can yield significantly faster learning rates compared to standard E2E supervision. Specifically, it is shown that the sample complexity required to achieve a target E2E error $\epsilon$ scales as $d/\mathcal{I}_{\mathcal{D}, h_\star}^{\mathrm{CoT}}(\epsilon; \calH)$, where $d$ is a measure of hypothesis class complexity, which can be much faster than standard $d/\epsilon$ rates. Information-theoretic lower bounds in terms of the CoT information are also obtained. Together, these results suggest that CoT information is a fundamental measure of statistical complexity for learning under chain-of-thought supervision.

stat.ML↗

arXiv2024

Disentangling and Integrating Relational and Sensory Information in Transformer Architectures

Relational reasoning is a central component of generally intelligent systems, enabling robust and data-efficient inductive generalization. Recent empirical evidence shows that many existing neural architectures, including Transformers, struggle with tasks requiring relational reasoning. In this work, we distinguish between two types of information: sensory information about the properties of individual objects, and relational information about the relationships between objects. While neural attention provides a powerful mechanism for controlling the flow of sensory information between objects, the Transformer lacks an explicit computational mechanism for routing and processing relational information. To address this limitation, we propose an architectural extension of the Transformer framework that we call the Dual Attention Transformer (DAT), featuring two distinct attention mechanisms: sensory attention for directing the flow of sensory information, and a novel relational attention mechanism for directing the flow of relational information. We empirically evaluate DAT on a diverse set of tasks ranging from synthetic relational benchmarks to complex real-world tasks such as language modeling and visual processing. Our results demonstrate that integrating explicit relational computational mechanisms into the Transformer architecture leads to significant performance gains in terms of data efficiency and parameter efficiency.

cs.LG↗

arXiv2024

Approximation of relation functions and attention mechanisms

Inner products of neural network feature maps arise in a wide variety of machine learning frameworks as a method of modeling relations between inputs. This work studies the approximation properties of inner products of neural networks. It is shown that the inner product of a multi-layer perceptron with itself is a universal approximator for symmetric positive-definite relation functions. In the case of asymmetric relation functions, it is shown that the inner product of two different multi-layer perceptrons is a universal approximator. In both cases, a bound is obtained on the number of neurons required to achieve a given accuracy of approximation. In the symmetric case, the function class can be identified with kernels of reproducing kernel Hilbert spaces, whereas in the asymmetric case the function class can be identified with kernels of reproducing kernel Banach spaces. Finally, these approximation results are applied to analyzing the attention mechanism underlying Transformers, showing that any retrieval mechanism defined by an abstract preorder can be approximated by attention through its inner product relations. This result uses the Debreu representation theorem in economics to represent preference relations in terms of utility functions.

cs.LG↗

arXiv2023

Learning Hierarchical Relational Representations through Relational Convolutions

An evolving area of research in deep learning is the study of architectures and inductive biases that support the learning of relational feature representations. In this paper, we address the challenge of learning representations of hierarchical relations--that is, higher-order relational patterns among groups of objects. We introduce "relational convolutional networks", a neural architecture equipped with computational mechanisms that capture progressively more complex relational features through the composition of simple modules. A key component of this framework is a novel operation that captures relational patterns in groups of objects by convolving graphlet filters--learnable templates of relational patterns--against subsets of the input. Composing relational convolutions gives rise to a deep architecture that learns representations of higher-order, hierarchical relations. We present the motivation and details of the architecture, together with a set of experiments to demonstrate how relational convolutional networks can provide an effective framework for modeling relational tasks that have hierarchical structure.

cs.LG↗

arXiv2023

The Relational Bottleneck as an Inductive Bias for Efficient Abstraction

A central challenge for cognitive science is to explain how abstract concepts are acquired from limited experience. This has often been framed in terms of a dichotomy between connectionist and symbolic cognitive models. Here, we highlight a recently emerging line of work that suggests a novel reconciliation of these approaches, by exploiting an inductive bias that we term the relational bottleneck. In that approach, neural networks are constrained via their architecture to focus on relations between perceptual inputs, rather than the attributes of individual inputs. We review a family of models that employ this approach to induce abstractions in a data-efficient manner, emphasizing their potential as candidate models for the acquisition of abstract concepts in the human mind and brain.

cs.AI↗

arXiv2023

Abstractors and relational cross-attention: An inductive bias for explicit relational reasoning in Transformers

An extension of Transformers is proposed that enables explicit relational reasoning through a novel module called the Abstractor. At the core of the Abstractor is a variant of attention called relational cross-attention. The approach is motivated by an architectural inductive bias for relational learning that disentangles relational information from object-level features. This enables explicit relational reasoning, supporting abstraction and generalization from limited data. The Abstractor is first evaluated on simple discriminative relational tasks and compared to existing relational architectures. Next, the Abstractor is evaluated on purely relational sequence-to-sequence tasks, where dramatic improvements are seen in sample efficiency compared to standard Transformers. Finally, Abstractors are evaluated on a collection of tasks based on mathematical problem solving, where consistent improvements in performance and sample efficiency are observed.

stat.ML↗

arXiv2023

From seeing to remembering: Images with harder-to-reconstruct representations leave stronger memory traces

Much of what we remember is not due to intentional selection, but simply a by-product of perceiving. This raises a foundational question about the architecture of the mind: How does perception interface with and influence memory? Here, inspired by a classic proposal relating perceptual processing to memory durability, the level-of-processing theory, we present a sparse coding model for compressing feature embeddings of images, and show that the reconstruction residuals from this model predict how well images are encoded into memory. In an open memorability dataset of scene images, we show that reconstruction error not only explains memory accuracy but also response latencies during retrieval, subsuming, in the latter case, all of the variance explained by powerful vision-only models. We also confirm a prediction of this account with 'model-driven psychophysics'. This work establishes reconstruction error as a novel signal interfacing perception and memory, possibly through adaptive modulation of perceptual processing.

q-bio.NC↗

arXiv2022

Emergent organization of receptive fields in networks of excitatory and inhibitory neurons

Local patterns of excitation and inhibition that can generate neural waves are studied as a computational mechanism underlying the organization of neuronal tunings. Sparse coding algorithms based on networks of excitatory and inhibitory neurons are proposed that exhibit topographic maps as the receptive fields are adapted to input stimuli. Motivated by a leaky integrate-and-fire model of neural waves, we propose an activation model that is more typical of artificial neural networks. Computational experiments with the activation model using both natural images and natural language text are presented. In the case of images, familiar "pinwheel" patterns of oriented edge detectors emerge; in the case of text, the resulting topographic maps exhibit a 2-dimensional representation of granular word semantics. Experiments with a synthetic model of somatosensory input are used to investigate how the network dynamics may affect plasticity of neuronal maps under changes to the inputs.

q-bio.NC↗

arXiv2021

Convergence and Alignment of Gradient Descent with Random Backpropagation Weights

Stochastic gradient descent with backpropagation is the workhorse of artificial neural networks. It has long been recognized that backpropagation fails to be a biologically plausible algorithm. Fundamentally, it is a non-local procedure -- updating one neuron's synaptic weights requires knowledge of synaptic weights or receptive fields of downstream neurons. This limits the use of artificial neural networks as a tool for understanding the biological principles of information processing in the brain. Lillicrap et al. (2016) propose a more biologically plausible "feedback alignment" algorithm that uses random and fixed backpropagation weights, and show promising simulations. In this paper we study the mathematical properties of the feedback alignment procedure by analyzing convergence and alignment for two-layer networks under squared error loss. In the overparameterized setting, we prove that the error converges to zero exponentially fast, and also that regularization is necessary in order for the parameters to become aligned with the random backpropagation weights. Simulations are given that are consistent with this analysis and suggest further generalizations. These results contribute to our understanding of how biologically plausible algorithms might carry out weight learning in a manner different from Hebbian learning, with performance that is comparable with the full non-local backpropagation algorithm.

stat.ML↗

arXiv2020

The huge Package for High-dimensional Undirected Graph Estimation in R

We describe an R package named huge which provides easy-to-use functions for estimating high dimensional undirected graphs from data. This package implements recent results in the literature, including Friedman et al. (2007), Liu et al. (2009, 2012) and Liu et al. (2010). Compared with the existing graph estimation package glasso, the huge package provides extra features: (1) instead of using Fortan, it is written in C, which makes the code more portable and easier to modify; (2) besides fitting Gaussian graphical models, it also provides functions for fitting high dimensional semiparametric Gaussian copula models; (3) more functions like data-dependent model selection, data generation and graph visualization; (4) a minor convergence problem of the graphical lasso algorithm is corrected; (5) the package allows the user to apply both lossless and lossy screening rules to scale up large-scale problems, making a tradeoff between computational and statistical efficiency.

stat.ML↗

arXiv2020

Model Repair: Robust Recovery of Over-Parameterized Statistical Models

A new type of robust estimation problem is introduced where the goal is to recover a statistical model that has been corrupted after it has been estimated from data. Methods are proposed for "repairing" the model using only the design and not the response values used to fit the model in a supervised learning setting. Theory is developed which reveals that two important ingredients are necessary for model repair---the statistical model must be over-parameterized, and the estimator must incorporate redundancy. In particular, estimators based on stochastic gradient descent are seen to be well suited to model repair, but sparse estimators are not in general repairable. After formulating the problem and establishing a key technical lemma related to robust estimation, a series of results are presented for repair of over-parameterized linear models, random feature models, and artificial neural networks. Simulation studies are presented that corroborate and illustrate the theoretical findings.

math.ST↗

arXiv2019

Fair quantile regression

Quantile regression is a tool for learning conditional distributions. In this paper we study quantile regression in the setting where a protected attribute is unavailable when fitting the model. This can lead to "unfair'' quantile estimators for which the effective quantiles are very different for the subpopulations defined by the protected attribute. We propose a procedure for adjusting the estimator on a heldout sample where the protected attribute is available. The main result of the paper is an empirical process analysis showing that the adjustment leads to a fair estimator for which the target quantiles are brought into balance, in a statistical sense that we call $\sqrt{n}$-fairness. We illustrate the ideas and adjustment procedure on a dataset of 200,000 live births, where the objective is to characterize the dependence of the birth weights of the babies on demographic attributes of the birth mother; the protected attribute is the mother's race.

math.ST↗

arXiv2019

Surfing: Iterative optimization over incrementally trained deep networks

We investigate a sequential optimization procedure to minimize the empirical risk functional $f_{\hat\theta}(x) = \frac{1}{2}\|G_{\hat\theta}(x) - y\|^2$ for certain families of deep networks $G_{\theta}(x)$. The approach is to optimize a sequence of objective functions that use network parameters obtained during different stages of the training process. When initialized with random parameters $\theta_0$, we show that the objective $f_{\theta_0}(x)$ is "nice'' and easy to optimize with gradient descent. As learning is carried out, we obtain a sequence of generative networks $x \mapsto G_{\theta_t}(x)$ and associated risk functions $f_{\theta_t}(x)$, where $t$ indicates a stage of stochastic gradient descent during training. Since the parameters of the network do not change by very much in each step, the surface evolves slowly and can be incrementally optimized. The algorithm is formalized and analyzed for a family of expansive networks. We call the procedure {\it surfing} since it rides along the peak of the evolving (negative) empirical risk function, starting from a smooth surface at the beginning of learning and ending with a wavy nonconvex surface after learning is complete. Experiments show how surfing can be used to find the global optimum and for compressed sensing even when direct gradient descent on the final learned network fails.

stat.ML↗

arXiv2019

TopicEq: A Joint Topic and Mathematical Equation Model for Scientific Texts

Scientific documents rely on both mathematics and text to communicate ideas. Inspired by the topical correspondence between mathematical equations and word contexts observed in scientific texts, we propose a novel topic model that jointly generates mathematical equations and their surrounding text (TopicEq). Using an extension of the correlated topic model, the context is generated from a mixture of latent topics, and the equation is generated by an RNN that depends on the latent topic activations. To experiment with this model, we create a corpus of 400K equation-context pairs extracted from a range of scientific articles from arXiv, and fit the model using a variational autoencoder approach. Experimental results show that this joint model significantly outperforms existing topic models and equation models for scientific texts. Moreover, we qualitatively show that the model effectively captures the relationship between topics and mathematics, enabling novel applications such as topic-aware equation generation, equation topic inference, and topic-aware alignment of mathematical symbols and words.

cs.IR↗