arXiv subjects

Jonah Ekelund

Publications and source records attributed to Jonah Ekelund.

7 recordsLinked to original sources

arXiv2026

Multi-GPU Hybrid Particle-in-Cell Monte Carlo Simulations for Exascale Computing Systems

Particle-in-Cell (PIC) Monte Carlo (MC) simulations are central to plasma physics but face increasing challenges on heterogeneous HPC systems due to excessive data movement, synchronization overheads, and inefficient utilization of multiple accelerators. In this work, we present a portable, multi-GPU hybrid MPI+OpenMP implementation of BIT1 that enables scalable execution on both Nvidia and AMD accelerators through OpenMP target tasks with explicit dependencies to overlap computation and communication across devices. Portability is achieved through persistent device-resident memory, an optimized contiguous one-dimensional data layout, and a transition from unified to pinned host memory to improve large data-transfer efficiency, together with GPU Direct Memory Access (DMA) and runtime interoperability for direct device-pointer access. Standardized and scalable I/O is provided using openPMD and ADIOS2, supporting high-performance file I/O, in-memory data streaming, and in-situ analysis and visualization. Performance results on pre-exascale and exascale systems, including Frontier (OLCF-5) for up to 16,000 GPUs, demonstrate significant improvements in run time, scalability, and resource utilization for large-scale PIC MC simulations.

physics.plasm-ph↗

arXiv2026

Evaluating Four FPGA-accelerated Space Use Cases based on Neural Network Algorithms for On-board Inference

Space missions increasingly deploy high-fidelity sensors that produce data volumes exceeding onboard buffering and downlink capacity. This work evaluates FPGA acceleration of neural networks (NNs) across four space use cases on the AMD ZCU104 board. We use Vitis AI (AMD DPU) and Vitis HLS to implement inference, quantify throughput and energy, and expose toolchain and architectural constraints relevant to deployment. Vitis AI achieves up to 34.16$\times$ higher inference rate than the embedded ARM CPU baseline, while custom HLS designs reach up to 5.4$\times$ speedup and add support for operators (e.g., sigmoids, 3D layers) absent in the DPU. For these implementations, measured MPSoC inference power spans 1.5-6.75 W, reducing energy per inference versus CPU execution in all use cases. These results show that NN FPGA acceleration can enable onboard filtering, compression, and event detection, easing downlink pressure in future missions.

cs.AR↗

arXiv2025

Adaptive PCA-Based Outlier Detection for Multi-Feature Time Series in Space Missions

Analyzing multi-featured time series data is critical for space missions making efficient event detection, potentially onboard, essential for automatic analysis. However, limited onboard computational resources and data downlink constraints necessitate robust methods for identifying regions of interest in real time. This work presents an adaptive outlier detection algorithm based on the reconstruction error of Principal Component Analysis (PCA) for feature reduction, designed explicitly for space mission applications. The algorithm adapts dynamically to evolving data distributions by using Incremental PCA, enabling deployment without a predefined model for all possible conditions. A pre-scaling process normalizes each feature's magnitude while preserving relative variance within feature types. We demonstrate the algorithm's effectiveness in detecting space plasma events, such as distinct space environments, dayside and nightside transients phenomena, and transition layers through NASA's MMS mission observations. Additionally, we apply the method to NASA's THEMIS data, successfully identifying a dayside transient using onboard-available measurements.

cs.LG↗

arXiv2025

Discovering Governing Equations of Geomagnetic Storm Dynamics with Symbolic Regression

Geomagnetic storms are large-scale disturbances of the Earth's magnetosphere driven by solar wind interactions, posing significant risks to space-based and ground-based infrastructure. The Disturbance Storm Time (Dst) index quantifies geomagnetic storm intensity by measuring global magnetic field variations. This study applies symbolic regression to derive data-driven equations describing the temporal evolution of the Dst index. We use historical data from the NASA OMNIweb database, including solar wind density, bulk velocity, convective electric field, dynamic pressure, and magnetic pressure. The PySR framework, an evolutionary algorithm-based symbolic regression library, is used to identify mathematical expressions linking dDst/dt to key solar wind. The resulting models include a hierarchy of complexity levels and enable a comparison with well-established empirical models such as the Burton-McPherron-Russell and O'Brien-McPherron models. The best-performing symbolic regression models demonstrate superior accuracy in most cases, particularly during moderate geomagnetic storms, while maintaining physical interpretability. Performance evaluation on historical storm events includes the 2003 Halloween Storm, the 2015 St. Patrick's Day Storm, and a 2017 moderate storm. The results provide interpretable, closed-form expressions that capture nonlinear dependencies and thresholding effects in Dst evolution.

cs.CE↗

arXiv2025

Boosting Performance of Iterative Applications on GPUs: Kernel Batching with CUDA Graphs

Graphics Processing Units (GPUs) have become the standard in accelerating scientific applications on heterogeneous systems. However, as GPUs are getting faster, one potential performance bottleneck with GPU-accelerated applications is the overhead from launching several fine-grained kernels. CUDA Graph addresses these performance challenges by enabling a graph-based execution model that captures operations as nodes and dependence as edges in a static graph. Thereby consolidating several kernel launches into one graph launch. We propose a performance optimization strategy for iteratively launched kernels. By grouping kernel launches into iteration batches and then unrolling these batches into a CUDA Graph, iterative applications can benefit from CUDA Graph for performance boosting. We analyze the performance gain and overhead from this approach by designing a skeleton application. The skeleton application also serves as a generalized example of converting an iterative solver to CUDA Graph, and for deriving a performance model. Using the skeleton application, we show that when unrolling iteration batches for a given platform, there is an optimal size of the iteration batch, which is independent of workload, balancing the extra overhead from graph creation with the performance gain of the graph execution. Depending on workload, we show that the optimal iteration batch size gives more than 1.4x speed-up in the skeleton application. Furthermore, we show that similar speed-up can be gained in Hotspot and Hotspot3D from the Rodinia benchmark suite and a Finite-Difference Time-Domain (FDTD) Maxwell solver.

cs.DC↗

arXiv2024

AI in Space for Scientific Missions: Strategies for Minimizing Neural-Network Model Upload

Artificial Intelligence (AI) has the potential to revolutionize space exploration by delegating several spacecraft decisions to an onboard AI instead of relying on ground control and predefined procedures. It is likely that there will be an AI/ML Processing Unit onboard the spacecraft running an inference engine. The neural-network will have pre-installed parameters that can be updated onboard by uploading, by telecommands, parameters obtained by training on the ground. However, satellite uplinks have limited bandwidth and transmissions can be costly. Furthermore, a mission operating with a suboptimal neural network will miss out on valuable scientific data. Smaller networks can thereby decrease the uplink cost, while increasing the value of the scientific data that is downloaded. In this work, we evaluate and discuss the use of reduced-precision and bare-minimum neural networks to reduce the time for upload. As an example of an AI use case, we focus on the NASA's Magnetosperic MultiScale (MMS) mission. We show how an AI onboard could be used in the Earth's magnetosphere to classify data to selectively downlink higher value data or to recognize a region-of-interest to trigger a burst-mode, collecting data at a high-rate. Using a simple filtering scheme and algorithm, we show how the start and end of a region-of-interest can be detected in on a stream of classifications. To provide the classifications, we use an established Convolutional Neural Network (CNN) trained to an accuracy >94%. We also show how the network can be reduced to a single linear layer and trained to the same accuracy as the established CNN. Thereby, reducing the overall size of the model by up to 98.9%. We further show how each network can be reduced by up to 75% of its original size, by using lower-precision formats to represent the network parameters, with a change in accuracy of less than 0.6 percentage points.

cs.AI↗

arXiv2019

Secondary cameras onboard the Mini-EUSO experiment: Control Software and Calibration

Mini-EUSO is a space experiment selected to be installed inside the International Space Station. It has a compact telescope with a large field of view ($44 $\times$ 44$ sq. deg.) focusing light on an array of photo-multipliers tubes in order to observe UV emission coming from Earth's atmosphere. Observations will be complemented with data recorded by some ancillary detectors. In particular, the Mini-EUSO Additional Data Acquisition System (ADS) is composed by two cameras, which will allow us to obtain data in the near infrared, and in the visible range. These will be used to monitor the observation conditions, and to acquire useful information on several scientific topics to be studied with the main instrument, such as the physics of atmosphere, meteors, and strange quark matter. Here we present the ADS control software developed to stream cameras together with the UV main instrument, in order to grab images in an automated and independent way, and we also describe the calibration activities performed on these two ancillary cameras before flight.

astro-ph.IM↗