arXiv subjects

Jonas Jalili Pedersen

Publications and source records attributed to Jonas Jalili Pedersen.

3 recordsLinked to original sources

arXiv2026

Automated Cardiac Adipose Tissue Segmentation in Computed Tomography: A Literature Review

This review provides an overview of recent advancements in automated segmentation methods on Computed Tomography (CT) for two types of cardiac fat: Epicardial adipose Tissue (EAT) and Pericardial Adipose Tissue (PAT). These fat deposits, separated by the pericardium, have been linked to various cardiovascular diseases, with EAT receiving the most research attention. Their complex anatomical context makes manual quantification highly time-consuming and prone to considerable inter-observer variability. Automated methods effectively address these complications, offering a more efficient and consistent solution. This study encompasses a broad range of methods, spanning AI as well as non-AI approaches. Additionally, it presents the remaining challenges, including the need for larger annotated public datasets and optimized attenuation thresholds for contrast-enhanced CT. It is demonstrated that automated methods are able to achieve segmentation results comparable to the quality of human annotation, proving their potential as a clinical tool for discovering new biomarkers and enhancing patient outcomes.

cs.CV↗

arXiv2025

Implicit Neural Representations for Registration of Left Ventricle Myocardium During a Cardiac Cycle

Understanding the movement of the left ventricle myocardium (LVmyo) during the cardiac cycle is essential for assessing cardiac function. One way to model this movement is through a series of deformable image registrations (DIRs) of the LVmyo. Traditional deep learning methods for DIRs, such as those based on convolutional neural networks, often require substantial memory and computational resources. In contrast, implicit neural representations (INRs) offer an efficient approach by operating on any number of continuous points. This study extends the use of INRs for DIR to cardiac computed tomography (CT), focusing on LVmyo registration. To enhance the precision of the registration around the LVmyo, we incorporate the signed distance field of the LVmyo with the Hounsfield Unit values from the CT frames. This guides the registration of the LVmyo, while keeping the tissue information from the CT frames. Our framework demonstrates high registration accuracy and provides a robust method for temporal registration that facilitates further analysis of LVmyo motion.

eess.IV↗

arXiv2024

Spatio-temporal neural distance fields for conditional generative modeling of the heart

The rhythmic pumping motion of the heart stands as a cornerstone in life, as it circulates blood to the entire human body through a series of carefully timed contractions of the individual chambers. Changes in the size, shape and movement of the chambers can be important markers for cardiac disease and modeling this in relation to clinical demography or disease is therefore of interest. Existing methods for spatio-temporal modeling of the human heart require shape correspondence over time or suffer from large memory requirements, making it difficult to use for complex anatomies. We introduce a novel conditional generative model, where the shape and movement is modeled implicitly in the form of a spatio-temporal neural distance field and conditioned on clinical demography. The model is based on an auto-decoder architecture and aims to disentangle the individual variations from that related to the clinical demography. It is tested on the left atrium (including the left atrial appendage), where it outperforms current state-of-the-art methods for anatomical sequence completion and generates synthetic sequences that realistically mimics the shape and motion of the real left atrium. In practice, this means we can infer functional measurements from a static image, generate synthetic populations with specified demography or disease and investigate how non-imaging clinical data effect the shape and motion of cardiac anatomies.

cs.CV↗