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Jonathan P. Williams

Publications and source records attributed to Jonathan P. Williams.

At least 55 records · Page 3Linked to original sources

A Bayesian shrinkage estimator for transfer learning

Transfer learning (TL) has emerged as a powerful tool to supplement data collected for a target task with data collected for a related source task. The Bayesian framework is natural for TL because information from the source data can be incorporated in the prior distribution for the target data analysis. In this paper, we propose and study Bayesian TL methods for the normal-means problem and multiple linear regression. We propose two classes of prior distributions. The first class assumes the difference in the parameters for the source and target tasks is sparse, i.e., many parameters are shared across tasks. The second assumes that none of the parameters are shared across tasks, but the differences are bounded in $\ell_2$-norm. For the sparse case, we propose a Bayes shrinkage estimator with theoretical guarantees under mild assumptions. The proposed methodology is tested on synthetic data and outperforms state-of-the-art TL methods. We then use this method to fine-tune the last layer of a neural network model to predict the molecular gap property in a material science application. We report improved performance compared to classical fine tuning and methods using only the target data.

stat.ME↗

Early Planet Formation in Embedded Disks (eDisk) XV: Influence of Magnetic Field Morphology in Dense Cores on Sizes of Protostellar Disks

The magnetic field of a molecular cloud core may play a role in the formation of circumstellar disks in the core. We present magnetic field morphologies in protostellar cores of 16 targets in the Atacama Large Millimeter/submillimeter Array large program "Early Planet Formation in Embedded Disks (eDisk)", which resolved their disks with 7 au resolutions. The 0.1-pc scale magnetic field morphologies were inferred from the James Clerk Maxwell Telescope (JCMT) POL-2 observations. The mean orientations and angular dispersions of the magnetic fields in the dense cores are measured and compared with the radii of the 1.3 mm continuum disks and the dynamically determined protostellar masses from the eDisk program. We observe a significant correlation between the disk radii and the stellar masses. We do not find any statistically significant dependence of the disk radii on the projected misalignment angles between the rotational axes of the disks and the magnetic fields in the dense cores, nor on the angular dispersions of the magnetic fields within these cores. However, when considering the projection effect, we cannot rule out a positive correlation between disk radii and misalignment angles in three-dimensional space. Our results suggest that the morphologies of magnetic fields in dense cores do not play a dominant role in the disk formation process. Instead, the sizes of protostellar disks may be more strongly affected by the amount of mass that has been accreted onto star+disk systems, and possibly other parameters, for example, magnetic field strength, core rotation, and magnetic diffusivity.

astro-ph.SR↗

Direct-imaging Discovery of a Substellar Companion Orbiting the Accelerating Variable Star, HIP 39017

We present the direct-imaging discovery of a substellar companion (a massive planet or low-mass brown dwarf) to the young, $γ$ Doradus-type variable star, HIP 39017 (HD 65526). The companion's SCExAO/CHARIS JHK ($1.1-2.4μ$m) spectrum and Keck/NIRC2 L$^{\prime}$ photometry indicate that it is an L/T transition object. A comparison of the JHK+L$^{\prime}$ spectrum to several atmospheric model grids finds a significantly better fit to cloudy models than cloudless models. Orbit modeling with relative astrometry and precision stellar astrometry from Hipparcos and Gaia yields a semi-major axis of $23.8^{+8.7}_{-6.1}$ au, a dynamical companion mass of $30^{+31}_{-12}$~M$_J$, and a mass ratio of $\sim$1.9\%, properties most consistent with low-mass brown dwarfs. However, its mass estimated from luminosity models is a lower $\sim$13.8 $M_{\rm J}$ due to an estimated young age ($\lesssim$ 115 Myr); using a weighted posterior distribution informed by conservative mass constraints from luminosity evolutionary models yields a lower dynamical mass of $23.6_{-7.4}^{+9.1}$~M$_J$ and a mass ratio of $\sim$1.4\%. Analysis of the host star's multi-frequency $γ$ Dor-type pulsations, astrometric monitoring of HIP 39017b, and Gaia Data Release 4 astrometry of the star will clarify the system age and better constrain the mass and orbit of the companion. This discovery further reinforces the improved efficiency of targeted direct-imaging campaigns informed by long-baseline, precision stellar astrometry.

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Valid Inference for Machine Learning Model Parameters

The parameters of a machine learning model are typically learned by minimizing a loss function on a set of training data. However, this can come with the risk of overtraining; in order for the model to generalize well, it is of great importance that we are able to find the optimal parameter for the model on the entire population -- not only on the given training sample. In this paper, we construct valid confidence sets for this optimal parameter of a machine learning model, which can be generated using only the training data without any knowledge of the population. We then show that studying the distribution of this confidence set allows us to assign a notion of confidence to arbitrary regions of the parameter space, and we demonstrate that this distribution can be well-approximated using bootstrapping techniques.

stat.ML↗

SCExAO/CHARIS Multi-Wavelength, High-Contrast Imaging of the BD+45$^\circ$598 Debris Disk

We present a multi-wavelength (1.16$μ$m-2.37$μ$m) view of the debris disk around BD+45$^\circ$598, using the Subaru Coronagraphic Extreme Adaptive Optics system paired with the Coronagraphic High Angular Resolution Imaging Spectrograph. With an assumed age of 23 Myr, this source allows us to study the early evolution of debris disks and search for forming planets. We fit a scattered light model to our disk using a differential evolution algorithm, and constrain its geometry. We find the disk to have a peak density radius of $R_0 = 109.6$ au, an inclination of $i = 88.1^\circ$, and position angle $PA = 111.0^\circ$. While we do not detect a substellar companion in the disk, our calculated contrast limits indicate sensitivity to planets as small as $\sim 10 M_{\rm Jup}$ at a projected separation of 12 au of the star, and as small as $\sim 4 M_{\rm Jup}$ beyond 38 au. When measuring intensity as a function of wavelength, the disk color constrains the minimum dust grain size within a range of $\sim0.13$ to 1.01$μ$m.

astro-ph.EP↗

Large-sample theory for inferential models: a possibilistic Bernstein--von Mises theorem

The inferential model (IM) framework offers alternatives to the familiar probabilistic (e.g., Bayesian and fiducial) uncertainty quantification in statistical inference. Allowing this uncertainty quantification to be imprecise makes it possible to achieve exact validity and reliability. But is imprecision and exact validity compatible with attainment of the classical notions of statistical efficiency? The present paper offers an affirmative answer to this question via a new possibilistic Bernstein--von Mises theorem that parallels a fundamental result in Bayesian inference. Among other things, our result demonstrates that the IM solution is asymptotically efficient in the sense that its asymptotic credal set is the smallest that contains the Gaussian distribution whose variance agrees with the Cramer--Rao lower bound.

math.ST↗

Mass assembly in massive star formation: a fragmentation study of ATLASGAL clumps

The mass assembly in star forming regions arises from the hierarchical structure in molecular clouds in tandem with fragmentation at different scales. In this paper, we present a study of the fragmentation of massive clumps covering a range of evolutionary states, selected from the ATLASGAL survey, using the compact configuration of the Submillimeter Array. The observations reveal a wide diversity in the fragmentation properties with about 60% of the sources showing limited to no fragmentation at the 2" scale, or a physical scale of 0.015 - 0.09 pc. We also find several examples where the cores detected with the Submillimeter array are significantly offset from the clump potential suggesting that initial fragmentation does not result in the formation of a large number of Jeans mass fragments. The fraction of the clump mass that is in compact structures is seen to increase with source evolution. We also see a significant correlation between the maximum mass of a fragment and the bolometric luminosity of the parent clump. These suggest that massive star formation proceeds through clump fed core accretion with the initial fragmentation being dependent on the density structure of the clumps and/or magnetic fields.

astro-ph.GA↗

SMA detection of an extreme millimeter flare from the young class III star HD 283572

We present evidence of variable 1.3 millimeter emission from the 1-3 Myr, SpT G2-G5 class III YSO, HD~283572. HD~283572 was observed on 8 dates with the Submillimeter Array between 2021 December and 2023 May, a total on-source time of 10.2 hours, probing a range of timescales down to 5.2 seconds. Averaging all data obtained on 2022 Jan 17 shows a 4.4 mJy ($8.8σ$) point source detection with a negative spectral index ($α{=}{-2.7}{\pm}1.2$), with peak emission rising to 13.8 mJy in one 3 minute span, and 25 mJy in one 29.7 second integration ($L_ν=4.7\times10^{17}$ erg s$^{-1}$ Hz$^{-1}$). Combining our data for the other 7 dates shows no detection, with an rms noise of 0.24 mJy beam$^{-1}$. The stochastic millimeter enhancements on time frames of seconds--minutes--hours with negative spectral indices are most plausibly explained by synchrotron or gyro-synchrotron radiation from stellar activity. HD 283572's 1.3 mm light-curve has similarities with variable binaries, suggesting HD 283572's activity may have been triggered by interactions with an as-yet undetected companion. We additionally identify variability of HD 283572 at 10 cm, from VLASS data. This study highlights the challenges of interpreting faint mm emission from evolved YSOs that may host tenuous disks, and suggests that a more detailed temporal analysis of spatially unresolved data is generally warranted. The variability of class III stars may open up new ground for understanding the physics of flares in the context of terrestrial planet formation.

astro-ph.SR↗

The Kinematic and Dynamic Properties of HBC 494's Wide-Angle Outflows

We present Atacama Large Millimeter/sub-millimeter Array (ALMA) Cycle-5 observations of HBC 494, as well as calculations of the kinematic and dynamic variables which represent the object's wide-angle bipolar outflows. HBC 494 is a binary FU Orionis type object located in the Orion A molecular cloud. We take advantage of combining the ALMA main array, Atacama Compact Array (ACA), and Total Power (TP) array in order to map HBC 494's outflows and thus, estimate their kinematic parameters with higher accuracy in comparison to prior publications. We use $^{12}$CO, $^{13}$CO, C$^{18}$O and SO observations to describe the object's outflows, envelope, and disc, as well as estimate the mass, momentum, and kinetic energy of the outflows. After correcting for optical opacity near systemic velocities, we estimate a mass of $3.0\times10^{-2}$ M$_{\odot}$ for the southern outflow and $2.8\times10^{-2}$ M$_{\odot}$ for the northern outflow. We report the first detection of a secondary outflow cavity located approximately $15$" north of the central binary system, which could be a remnant of a previous large-scale accretion outburst. Furthermore, we find CO spatial features in HBC 494's outflows corresponding to position angles of $\sim35^{\circ}$ and $\sim145^{\circ}$. This suggests that HBC 494's outflows are most likely a composite of overlapping outflows from two different sources, i.e., HBC 494a and HBC 494b, the two objects in the binary system.

astro-ph.SR↗

TIPSY: Trajectory of Infalling Particles in Streamers around Young stars. Dynamical analysis of the streamers around S CrA and HL Tau

Context. Elongated trails of infalling gas, often referred to as "streamers," have recently been observed around young stellar objects (YSOs) at different evolutionary stages. This asymmetric infall of material can significantly alter star and planet formation processes, especially in the more evolved YSOs. Aims. In order to ascertain the infalling nature of observed streamer-like structures and then systematically characterize their dynamics, we developed the code TIPSY (Trajectory of Infalling Particles in Streamers around Young stars). Methods. Using TIPSY, the streamer molecular line emission is first isolated from the disk emission. Then the streamer emission, which is effectively a point cloud in three-dimensional (3D) position-position-velocity space, is simplified to a curve-like representation. The observed streamer curve is then compared to the theoretical trajectories of infalling material. The best-fit trajectories are used to constrain streamer features, such as the specific energy, the specific angular momenta, the infall timescale, and the 3D morphology. Results. We used TIPSY to fit molecular-line ALMA observations of streamers around a Class II binary system, S CrA, and a Class I/II protostar, HL Tau. Our results indicate that both of the streamers are consistent with infalling motion. TIPSY results and mass estimates suggest that S CrA and HL Tau are accreting material at a rate of $\gtrsim27$ M$_{jupiter}$ Myr$^{-1}$ and $\gtrsim5$ M$_{jupiter}$ Myr$^{-1}$, respectively, which can significantly increase the mass budget available to form planets. Conclusions. TIPSY can be used to assess whether the morphology and kinematics of observed streamers are consistent with infalling motion and to characterize their dynamics, which is crucial for quantifying their impact on the protostellar systems.

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Early Planet Formation in Embedded Disks (eDisk) XIV: Flared Dust Distribution and Viscous Accretion Heating of the Disk around R CrA IRS 7B-a

We performed radiative transfer calculations and observing simulations to reproduce the 1.3-mm dust-continuum and C$^{18}$O (2-1) images in the Class I protostar R CrA IRS7B-a, observed with the ALMA Large Program ``Early Planet Formation in Embedded Disks (eDisk)". We found that the dust disk model passively heated by the central protostar cannot reproduce the observed peak brightness temperature of the 1.3-mm continuum emission ($\sim$195 K), regardless of the assumptions about the dust opacity. Our calculation suggests that viscous accretion heating in the disk is required to reproduce the observed high brightness temperature. The observed intensity profile of the 1.3-mm dust-continuum emission along the disk minor axis is skewed toward the disk far side. Our modeling reveals that such an asymmetric intensity distribution requires flaring of the dust along the disk's vertical direction with the scale-height following $h/r \sim r^{0.3}$ as function of radius. These results are in sharp contrast to those of Class II disks, which show geometrically flat dust distributions and lower dust temperatures. From our modeling of the C$^{18}$O (2-1) emission, the outermost radius of the gas disk is estimated to be $\sim$80 au, larger than that of the dust disk ($\sim$62 au), to reproduce the observed distribution of the C$^{18}$O (2-1) emission in IRS 7B-a. Our modeling unveils a hot and thick dust disk plus a larger gas disk around one of the eDisk targets, which could be applicable to other protostellar sources in contrast to more evolved sources.

astro-ph.EP↗

Early Planet Formation in Embedded Disks (eDisk) X: Compact Disks, Extended Infall, and a Fossil Outburst in the Class I Oph IRS43 Binary

We present the first results from the Early Planet Formation in Embedded Disks (eDisk) ALMA Large Program toward Oph IRS43, a binary system of solar mass protostars. The 1.3 mm dust continuum observations resolve a compact disk, ~6au radius, around the northern component and show that the disk around the southern component is even smaller, <~3 au. CO, 13CO, and C18O maps reveal a large cavity in a low mass envelope that shows kinematic signatures of rotation and infall extending out to ~ 2000au. An expanding CO bubble centered on the extrapolated location of the source ~130 years ago suggests a recent outburst. Despite the small size of the disks, the overall picture is of a remarkably large and dynamically active region.

astro-ph.SR↗

Early Planet Formation in Embedded Disks (eDisk) XII: Accretion streamers, protoplanetary disk, and outflow in the Class I source Oph IRS63

We present ALMA observations of the Class I source Oph IRS63 in the context of the Early Planet Formation in Embedded Disks (eDisk) large program. Our ALMA observations of Oph IRS63 show a myriad of protostellar features, such as a shell-like bipolar outflow (in $^{12}$CO), an extended rotating envelope structure (in $^{13}$CO), a streamer connecting the envelope to the disk (in C$^{18}$O), and several small-scale spiral structures seen towards the edge of the dust continuum (in SO). By analyzing the velocity pattern of $^{13}$CO and C$^{18}$O, we measure a protostellar mass of $\rm M_\star = 0.5 \pm 0.2 $~$\rm M_\odot$ and confirm the presence of a disk rotating at almost Keplerian velocity that extends up to $\sim260$ au. These calculations also show that the gaseous disk is about four times larger than the dust disk, which could indicate dust evolution and radial drift. Furthermore, we model the C$^{18}$O streamer and SO spiral structures as features originating from an infalling rotating structure that continuously feeds the young protostellar disk. We compute an envelope-to-disk mass infall rate of $\sim 10^{-6}$~$\rm M_\odot \, yr^{-1}$ and compare it to the disk-to-star mass accretion rate of $\sim 10^{-8}$~$\rm M_\odot \, yr^{-1}$, from which we infer that the protostellar disk is in a mass build-up phase. At the current mass infall rate, we speculate that soon the disk will become too massive to be gravitationally stable.

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Early Planet Formation in Embedded Disks (eDisk). VIII. A Small Protostellar Disk around the Extremely Low-Mass and Young Class 0 Protostar, IRAS 15398-3359

Protostellar disks are a ubiquitous part of the star formation process and the future sites of planet formation. As part of the Early Planet Formation in Embedded Disks (eDisk) large program, we present high-angular resolution dust continuum ($\sim40\,$mas) and molecular line ($\sim150\,$mas) observations of the Class 0 protostar, IRAS 15398-3359. The dust continuum is small, compact, and centrally peaked, while more extended dust structures are found in the outflow directions. We perform a 2D Gaussian fitting to find the deconvolved size and $2σ$ radius of the dust disk to be $4.5\times2.8\,\mathrm{au}$ and $3.8\,\mathrm{au}$, respectively. We estimate the gas+dust disk mass assuming optically thin continuum emission to be $0.6-1.8\,M_\mathrm{jup}$, indicating a very low-mass disk. The CO isotopologues trace components of the outflows and inner envelope, while SO traces a compact, rotating disk-like component. Using several rotation curve fittings on the PV diagram of the SO emission, the lower limits of the protostellar mass and gas disk radius are $0.022\,M_\odot$ and $31.2\,\mathrm{au}$ from our Modified 2 single power-law fitting. A conservative upper limit of the protostellar mass is inferred to be $0.1\,M_\odot$. The protostellar mass-accretion rate and the specific angular momentum at the protostellar disk edge are found to be between $1.3-6.1\times10^{-6}\,M_\odot\,\mathrm{yr^{-1}}$ and $1.2-3.8\times10^{-4}\,\mathrm{km\,s^{-1}\,pc}$, respectively, with an age estimated between $0.4-7.5\times10^{4}\,$yr. At this young age with no clear substructures in the disk, planet formation would likely not yet have started. This study highlights the importance of high-resolution observations and systematic fitting procedures when deriving dynamical properties of deeply embedded Class 0 protostars.

astro-ph.EP↗

Bayes Watch: Bayesian Change-point Detection for Process Monitoring with Fault Detection

When a predictive model is in production, it must be monitored in real-time to ensure that its performance does not suffer due to drift or abrupt changes to data. Ideally, this is done long before learning that the performance of the model itself has dropped by monitoring outcome data. In this paper we consider the problem of monitoring a predictive model that identifies the need for palliative care currently in production at the Mayo Clinic in Rochester, MN. We introduce a framework, called \textit{Bayes Watch}, for detecting change-points in high-dimensional longitudinal data with mixed variable types and missing values and for determining in which variables the change-point occurred. Bayes Watch fits an array of Gaussian Graphical Mixture Models to groupings of homogeneous data in time, called regimes, which are modeled as the observed states of a Markov process with unknown transition probabilities. In doing so, Bayes Watch defines a posterior distribution on a vector of regime assignments, which gives meaningful expressions on the probability of every possible change-point. Bayes Watch also allows for an effective and efficient fault detection system that assesses what features in the data where the most responsible for a given change-point.

stat.AP↗

Early Planet Formation in Embedded Disks (eDisk) VI: Kinematic Structures around the Very Low Mass Protostar IRAS 16253-2429

Precise estimates of protostellar masses are crucial to characterize the formation of stars of low masses down to brown-dwarfs (BDs; M* < 0.08 Msun). The most accurate estimation of protostellar mass uses the Keplerian rotation in the circumstellar disk around the protostar. To apply the Keplerian rotation method to a protostar at the low-mass end, we have observed the Class 0 protostar IRAS 16253-2429 using the Atacama Large Millimeter/submillimeter Array (ALMA) in the 1.3 mm continuum at an angular resolution of 0.07" (10 au), and in the 12CO, C18O, 13CO (J=2-1), and SO (J_N = 6_5-5_4) molecular lines, as part of the ALMA Large Program Early Planet Formation in Embedded Disks (eDisk). The continuum emission traces a non-axisymmetric, disk-like structure perpendicular to the associated 12CO outflow. The position-velocity (PV) diagrams in the C18O and 13CO lines can be interpreted as infalling and rotating motions. In contrast, the PV diagram along the major axis of the disk-like structure in the 12CO line allows us to identify Keplerian rotation. The central stellar mass and the disk radius are estimated to be ~0.12-0.17 Msun and ~13-19 au, respectively. The SO line suggests the existence of an accretion shock at a ring (r~28 au) surrounding the disk and a streamer from the eastern side of the envelope. IRAS 16253-2429 is not a proto-BD but has a central stellar mass close to the BD mass regime, and our results provide a typical picture of such very low-mass protostars.

astro-ph.EP↗

Early Planet Formation in Embedded Disks (eDisk) IX: High-resolution ALMA Observations of the Class 0 Protostar R CrA IRS5N and its surrounding

We present high-resolution, high-sensitivity observations of the Class 0 protostar RCrA IRS5N as part of the Atacama Large Milimeter/submilimeter Array (ALMA) large program Early Planet Formation in Embedded Disks (eDisk). The 1.3 mm continuum emission reveals a flattened continuum structure around IRS5N, consistent with a protostellar disk in the early phases of evolution. The continuum emission appears smooth and shows no substructures. However, a brightness asymmetry is observed along the minor axis of the disk, suggesting the disk is optically and geometrically thick. We estimate the disk mass to be between 0.007 and 0.02 M$_{\odot}$. Furthermore, molecular emission has been detected from various species, including C$^{18}$O (2$-$1), $^{12}$CO (2$-$1), $^{13}$CO (2$-$1), and H$_2$CO (3$_{0,3}-2_{0,2}$, 3$_{2,1}-2_{2,0}$, and 3$_{2,2}-2_{2,1}$). By conducting a position-velocity analysis of the C$^{18}$O (2$-$1) emission, we find that the disk of IRS5N exhibits characteristics consistent with Keplerian rotation around a central protostar with a mass of approximately 0.3 M$_{\odot}$. Additionally, we observe dust continuum emission from the nearby binary source, IRS5a/b. The emission in $^{12}$CO toward IRS5a/b seems to emanate from IRS5b and flow into IRS5a, suggesting material transport between their mutual orbits. The lack of a detected outflow and large-scale negatives in \tlvco~observed toward IRS5N suggests that much of the flux from IRS5N is being resolved out. Due to this substantial surrounding envelope, the central IRS5N protostar is expected to be significantly more massive in the future.

astro-ph.EP↗

Early Planet Formation in Embedded Disks (eDisk) V: Possible Annular Substructure in a Circumstellar Disk in the Ced110 IRS4 System

We have observed the Class 0/I protostellar system Ced110 IRS4 at an angular resolution of $0.05''$ ($\sim$10 au) as a part of the ALMA large program; Early Planet Formation in the Embedded Disks (eDisk). The 1.3 mm dust continuum emission reveals that Ced110 IRS4 is a binary system with a projected separation of $\sim$250 au. The continuum emissions associated with the main source and its companion, named Ced110 IRS4A and IRS4B respectively, exhibit disk-like shapes and likely arise from dust disks around the protostars. The continuum emission of Ced110 IRS4A has a radius of $\sim$91.7 au ($\sim0.485''$), and shows bumps along its major axis with an asymmetry. The bumps can be interpreted as an shallow, ring-like structure at a radius of $\sim$40 au ($\sim0.2''$) in the continuum emission, as demonstrated from two-dimensional intensity distribution models. A rotation curve analysis on the C$^{18}$O and $^{13}$CO $J=2$-1 lines reveals the presence of a Keplerian disk within a radius of 120 au around Ced110 IRS4A, which supports the interpretation that the dust continuum emission arises from a disk. The ring-like structure in the dust continuum emission might indicate a possible, annular substructure in the surface density of the embedded disk, although the possibility that it is an apparent structure due to the optically thick continuum emission cannot be ruled out.

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