arXiv subjects

Jonathon Shlens

Publications and source records attributed to Jonathon Shlens.

At least 19 recordsLinked to original sources

arXiv2025

MedGemma Technical Report

Artificial intelligence (AI) has significant potential in healthcare applications, but its training and deployment faces challenges due to healthcare's diverse data, complex tasks, and the need to preserve privacy. Foundation models that perform well on medical tasks and require less task-specific tuning data are critical to accelerate the development of healthcare AI applications. We introduce MedGemma, a collection of medical vision-language foundation models based on Gemma 3 4B and 27B. MedGemma demonstrates advanced medical understanding and reasoning on images and text, significantly exceeding the performance of similar-sized generative models and approaching the performance of task-specific models, while maintaining the general capabilities of the Gemma 3 base models. For out-of-distribution tasks, MedGemma achieves 2.6-10% improvement on medical multimodal question answering, 15.5-18.1% improvement on chest X-ray finding classification, and 10.8% improvement on agentic evaluations compared to the base models. Fine-tuning MedGemma further improves performance in subdomains, reducing errors in electronic health record information retrieval by 50% and reaching comparable performance to existing specialized state-of-the-art methods for pneumothorax classification and histopathology patch classification. We additionally introduce MedSigLIP, a medically-tuned vision encoder derived from SigLIP. MedSigLIP powers the visual understanding capabilities of MedGemma and as an encoder achieves comparable or better performance than specialized medical image encoders. Taken together, the MedGemma collection provides a strong foundation of medical image and text capabilities, with potential to significantly accelerate medical research and development of downstream applications. The MedGemma collection, including tutorials and model weights, can be found at https://goo.gle/medgemma.

cs.AI↗

arXiv2024

Learning Visual Composition through Improved Semantic Guidance

Visual imagery does not consist of solitary objects, but instead reflects the composition of a multitude of fluid concepts. While there have been great advances in visual representation learning, such advances have focused on building better representations for a small number of discrete objects bereft of an understanding of how these objects are interacting. One can observe this limitation in representations learned through captions or contrastive learning -- where the learned model treats an image essentially as a bag of words. Several works have attempted to address this limitation through the development of bespoke learned architectures to directly address the shortcomings in compositional learning. In this work, we focus on simple, and scalable approaches. In particular, we demonstrate that by substantially improving weakly labeled data, i.e. captions, we can vastly improve the performance of standard contrastive learning approaches. Previous CLIP models achieved near chance rate on challenging tasks probing compositional learning. However, our simple approach boosts performance of CLIP substantially and surpasses all bespoke architectures. Furthermore, we showcase our results on a relatively new captioning benchmark derived from DOCCI. We demonstrate through a series of ablations that a standard CLIP model trained with enhanced data may demonstrate impressive performance on image retrieval tasks.

cs.CV↗

arXiv2024

Towards flexible perception with visual memory

Training a neural network is a monolithic endeavor, akin to carving knowledge into stone: once the process is completed, editing the knowledge in a network is hard, since all information is distributed across the network's weights. We here explore a simple, compelling alternative by marrying the representational power of deep neural networks with the flexibility of a database. Decomposing the task of image classification into image similarity (from a pre-trained embedding) and search (via fast nearest neighbor retrieval from a knowledge database), we build on well-established components to construct a simple and flexible visual memory that has the following key capabilities: (1.) The ability to flexibly add data across scales: from individual samples all the way to entire classes and billion-scale data; (2.) The ability to remove data through unlearning and memory pruning; (3.) An interpretable decision-mechanism on which we can intervene to control its behavior. Taken together, these capabilities comprehensively demonstrate the benefits of an explicit visual memory. We hope that it might contribute to a conversation on how knowledge should be represented in deep vision models -- beyond carving it in "stone" weights.

cs.CV↗

arXiv2024

Capabilities of Gemini Models in Medicine

Excellence in a wide variety of medical applications poses considerable challenges for AI, requiring advanced reasoning, access to up-to-date medical knowledge and understanding of complex multimodal data. Gemini models, with strong general capabilities in multimodal and long-context reasoning, offer exciting possibilities in medicine. Building on these core strengths of Gemini, we introduce Med-Gemini, a family of highly capable multimodal models that are specialized in medicine with the ability to seamlessly use web search, and that can be efficiently tailored to novel modalities using custom encoders. We evaluate Med-Gemini on 14 medical benchmarks, establishing new state-of-the-art (SoTA) performance on 10 of them, and surpass the GPT-4 model family on every benchmark where a direct comparison is viable, often by a wide margin. On the popular MedQA (USMLE) benchmark, our best-performing Med-Gemini model achieves SoTA performance of 91.1% accuracy, using a novel uncertainty-guided search strategy. On 7 multimodal benchmarks including NEJM Image Challenges and MMMU (health & medicine), Med-Gemini improves over GPT-4V by an average relative margin of 44.5%. We demonstrate the effectiveness of Med-Gemini's long-context capabilities through SoTA performance on a needle-in-a-haystack retrieval task from long de-identified health records and medical video question answering, surpassing prior bespoke methods using only in-context learning. Finally, Med-Gemini's performance suggests real-world utility by surpassing human experts on tasks such as medical text summarization, alongside demonstrations of promising potential for multimodal medical dialogue, medical research and education. Taken together, our results offer compelling evidence for Med-Gemini's potential, although further rigorous evaluation will be crucial before real-world deployment in this safety-critical domain.

cs.AI↗

arXiv2023

Perceptual Grouping in Contrastive Vision-Language Models

Recent advances in zero-shot image recognition suggest that vision-language models learn generic visual representations with a high degree of semantic information that may be arbitrarily probed with natural language phrases. Understanding an image, however, is not just about understanding what content resides within an image, but importantly, where that content resides. In this work we examine how well vision-language models are able to understand where objects reside within an image and group together visually related parts of the imagery. We demonstrate how contemporary vision and language representation learning models based on contrastive losses and large web-based data capture limited object localization information. We propose a minimal set of modifications that results in models that uniquely learn both semantic and spatial information. We measure this performance in terms of zero-shot image recognition, unsupervised bottom-up and top-down semantic segmentations, as well as robustness analyses. We find that the resulting model achieves state-of-the-art results in terms of unsupervised segmentation, and demonstrate that the learned representations are uniquely robust to spurious correlations in datasets designed to probe the causal behavior of vision models.

cs.CV↗

arXiv2023

MOFI: Learning Image Representations from Noisy Entity Annotated Images

We present MOFI, Manifold OF Images, a new vision foundation model designed to learn image representations from noisy entity annotated images. MOFI differs from previous work in two key aspects: (i) pre-training data, and (ii) training recipe. Regarding data, we introduce a new approach to automatically assign entity labels to images from noisy image-text pairs. Our approach involves employing a named entity recognition model to extract entities from the alt-text, and then using a CLIP model to select the correct entities as labels of the paired image. It's a simple, cost-effective method that can scale to handle billions of web-mined image-text pairs. Through this method, we have created Image-to-Entities (I2E), a new dataset with 1 billion images and 2 million distinct entities, covering rich visual concepts in the wild. Building upon the I2E dataset, we study different training recipes like supervised pre-training, contrastive pre-training, and multi-task learning. For contrastive pre-training, we treat entity names as free-form text, and further enrich them with entity descriptions. Experiments show that supervised pre-training with large-scale fine-grained entity labels is highly effective for image retrieval tasks, and multi-task training further improves the performance. The final MOFI model achieves 86.66% mAP on the challenging GPR1200 dataset, surpassing the previous state-of-the-art performance of 72.19% from OpenAI's CLIP model. Further experiments on zero-shot and linear probe image classification also show that MOFI outperforms a CLIP model trained on the original image-text data, demonstrating the effectiveness of the I2E dataset in learning strong image representations. We release our code and model weights at https://github.com/apple/ml-mofi.

cs.CV↗

arXiv2023

On Robustness in Multimodal Learning

Multimodal learning is defined as learning over multiple heterogeneous input modalities such as video, audio, and text. In this work, we are concerned with understanding how models behave as the type of modalities differ between training and deployment, a situation that naturally arises in many applications of multimodal learning to hardware platforms. We present a multimodal robustness framework to provide a systematic analysis of common multimodal representation learning methods. Further, we identify robustness short-comings of these approaches and propose two intervention techniques leading to $1.5\times$-$4\times$ robustness improvements on three datasets, AudioSet, Kinetics-400 and ImageNet-Captions. Finally, we demonstrate that these interventions better utilize additional modalities, if present, to achieve competitive results of $44.2$ mAP on AudioSet 20K.

cs.LG↗

arXiv2023

STAIR: Learning Sparse Text and Image Representation in Grounded Tokens

Image and text retrieval is one of the foundational tasks in the vision and language domain with multiple real-world applications. State-of-the-art approaches, e.g. CLIP, ALIGN, represent images and texts as dense embeddings and calculate the similarity in the dense embedding space as the matching score. On the other hand, sparse semantic features like bag-of-words models are more interpretable, but believed to suffer from inferior accuracy than dense representations. In this work, we show that it is possible to build a sparse semantic representation that is as powerful as, or even better than, dense presentations. We extend the CLIP model and build a sparse text and image representation (STAIR), where the image and text are mapped to a sparse token space. Each token in the space is a (sub-)word in the vocabulary, which is not only interpretable but also easy to integrate with existing information retrieval systems. STAIR model significantly outperforms a CLIP model with +$4.9\%$ and +$4.3\%$ absolute Recall@1 improvement on COCO-5k text$\rightarrow$image and image$\rightarrow$text retrieval respectively. It also achieved better performance on both of ImageNet zero-shot and linear probing compared to CLIP.

cs.CV↗

arXiv2022

PseudoAugment: Learning to Use Unlabeled Data for Data Augmentation in Point Clouds

Data augmentation is an important technique to improve data efficiency and save labeling cost for 3D detection in point clouds. Yet, existing augmentation policies have so far been designed to only utilize labeled data, which limits the data diversity. In this paper, we recognize that pseudo labeling and data augmentation are complementary, thus propose to leverage unlabeled data for data augmentation to enrich the training data. In particular, we design three novel pseudo-label based data augmentation policies (PseudoAugments) to fuse both labeled and pseudo-labeled scenes, including frames (PseudoFrame), objecta (PseudoBBox), and background (PseudoBackground). PseudoAugments outperforms pseudo labeling by mitigating pseudo labeling errors and generating diverse fused training scenes. We demonstrate PseudoAugments generalize across point-based and voxel-based architectures, different model capacity and both KITTI and Waymo Open Dataset. To alleviate the cost of hyperparameter tuning and iterative pseudo labeling, we develop a population-based data augmentation framework for 3D detection, named AutoPseudoAugment. Unlike previous works that perform pseudo-labeling offline, our framework performs PseudoAugments and hyperparameter tuning in one shot to reduce computational cost. Experimental results on the large-scale Waymo Open Dataset show our method outperforms state-of-the-art auto data augmentation method (PPBA) and self-training method (pseudo labeling). In particular, AutoPseudoAugment is about 3X and 2X data efficient on vehicle and pedestrian tasks compared to prior arts. Notably, AutoPseudoAugment nearly matches the full dataset training results, with just 10% of the labeled run segments on the vehicle detection task.

cs.CV↗

arXiv2022

Scene Transformer: A unified architecture for predicting multiple agent trajectories

Predicting the motion of multiple agents is necessary for planning in dynamic environments. This task is challenging for autonomous driving since agents (e.g. vehicles and pedestrians) and their associated behaviors may be diverse and influence one another. Most prior work have focused on predicting independent futures for each agent based on all past motion, and planning against these independent predictions. However, planning against independent predictions can make it challenging to represent the future interaction possibilities between different agents, leading to sub-optimal planning. In this work, we formulate a model for predicting the behavior of all agents jointly, producing consistent futures that account for interactions between agents. Inspired by recent language modeling approaches, we use a masking strategy as the query to our model, enabling one to invoke a single model to predict agent behavior in many ways, such as potentially conditioned on the goal or full future trajectory of the autonomous vehicle or the behavior of other agents in the environment. Our model architecture employs attention to combine features across road elements, agent interactions, and time steps. We evaluate our approach on autonomous driving datasets for both marginal and joint motion prediction, and achieve state of the art performance across two popular datasets. Through combining a scene-centric approach, agent permutation equivariant model, and a sequence masking strategy, we show that our model can unify a variety of motion prediction tasks from joint motion predictions to conditioned prediction.

cs.CV↗

arXiv2022

Mitigating Bias in Calibration Error Estimation

For an AI system to be reliable, the confidence it expresses in its decisions must match its accuracy. To assess the degree of match, examples are typically binned by confidence and the per-bin mean confidence and accuracy are compared. Most research in calibration focuses on techniques to reduce this empirical measure of calibration error, ECE_bin. We instead focus on assessing statistical bias in this empirical measure, and we identify better estimators. We propose a framework through which we can compute the bias of a particular estimator for an evaluation data set of a given size. The framework involves synthesizing model outputs that have the same statistics as common neural architectures on popular data sets. We find that binning-based estimators with bins of equal mass (number of instances) have lower bias than estimators with bins of equal width. Our results indicate two reliable calibration-error estimators: the debiased estimator (Brocker, 2012; Ferro and Fricker, 2012) and a method we propose, ECE_sweep, which uses equal-mass bins and chooses the number of bins to be as large as possible while preserving monotonicity in the calibration function. With these estimators, we observe improvements in the effectiveness of recalibration methods and in the detection of model miscalibration.

cs.LG↗

arXiv2021

Soft Calibration Objectives for Neural Networks

Optimal decision making requires that classifiers produce uncertainty estimates consistent with their empirical accuracy. However, deep neural networks are often under- or over-confident in their predictions. Consequently, methods have been developed to improve the calibration of their predictive uncertainty both during training and post-hoc. In this work, we propose differentiable losses to improve calibration based on a soft (continuous) version of the binning operation underlying popular calibration-error estimators. When incorporated into training, these soft calibration losses achieve state-of-the-art single-model ECE across multiple datasets with less than 1% decrease in accuracy. For instance, we observe an 82% reduction in ECE (70% relative to the post-hoc rescaled ECE) in exchange for a 0.7% relative decrease in accuracy relative to the cross entropy baseline on CIFAR-100. When incorporated post-training, the soft-binning-based calibration error objective improves upon temperature scaling, a popular recalibration method. Overall, experiments across losses and datasets demonstrate that using calibration-sensitive procedures yield better uncertainty estimates under dataset shift than the standard practice of using a cross entropy loss and post-hoc recalibration methods.

cs.LG↗

arXiv2021

Scalable Scene Flow from Point Clouds in the Real World

Autonomous vehicles operate in highly dynamic environments necessitating an accurate assessment of which aspects of a scene are moving and where they are moving to. A popular approach to 3D motion estimation, termed scene flow, is to employ 3D point cloud data from consecutive LiDAR scans, although such approaches have been limited by the small size of real-world, annotated LiDAR data. In this work, we introduce a new large-scale dataset for scene flow estimation derived from corresponding tracked 3D objects, which is $\sim$1,000$\times$ larger than previous real-world datasets in terms of the number of annotated frames. We demonstrate how previous works were bounded based on the amount of real LiDAR data available, suggesting that larger datasets are required to achieve state-of-the-art predictive performance. Furthermore, we show how previous heuristics for operating on point clouds such as down-sampling heavily degrade performance, motivating a new class of models that are tractable on the full point cloud. To address this issue, we introduce the FastFlow3D architecture which provides real time inference on the full point cloud. Additionally, we design human-interpretable metrics that better capture real world aspects by accounting for ego-motion and providing breakdowns per object type. We hope that this dataset may provide new opportunities for developing real world scene flow systems.

cs.CV↗

arXiv2021

Bottleneck Transformers for Visual Recognition

We present BoTNet, a conceptually simple yet powerful backbone architecture that incorporates self-attention for multiple computer vision tasks including image classification, object detection and instance segmentation. By just replacing the spatial convolutions with global self-attention in the final three bottleneck blocks of a ResNet and no other changes, our approach improves upon the baselines significantly on instance segmentation and object detection while also reducing the parameters, with minimal overhead in latency. Through the design of BoTNet, we also point out how ResNet bottleneck blocks with self-attention can be viewed as Transformer blocks. Without any bells and whistles, BoTNet achieves 44.4% Mask AP and 49.7% Box AP on the COCO Instance Segmentation benchmark using the Mask R-CNN framework; surpassing the previous best published single model and single scale results of ResNeSt evaluated on the COCO validation set. Finally, we present a simple adaptation of the BoTNet design for image classification, resulting in models that achieve a strong performance of 84.7% top-1 accuracy on the ImageNet benchmark while being up to 1.64x faster in compute time than the popular EfficientNet models on TPU-v3 hardware. We hope our simple and effective approach will serve as a strong baseline for future research in self-attention models for vision

cs.CV↗

arXiv2021

Scaling Local Self-Attention for Parameter Efficient Visual Backbones

Self-attention has the promise of improving computer vision systems due to parameter-independent scaling of receptive fields and content-dependent interactions, in contrast to parameter-dependent scaling and content-independent interactions of convolutions. Self-attention models have recently been shown to have encouraging improvements on accuracy-parameter trade-offs compared to baseline convolutional models such as ResNet-50. In this work, we aim to develop self-attention models that can outperform not just the canonical baseline models, but even the high-performing convolutional models. We propose two extensions to self-attention that, in conjunction with a more efficient implementation of self-attention, improve the speed, memory usage, and accuracy of these models. We leverage these improvements to develop a new self-attention model family, HaloNets, which reach state-of-the-art accuracies on the parameter-limited setting of the ImageNet classification benchmark. In preliminary transfer learning experiments, we find that HaloNet models outperform much larger models and have better inference performance. On harder tasks such as object detection and instance segmentation, our simple local self-attention and convolutional hybrids show improvements over very strong baselines. These results mark another step in demonstrating the efficacy of self-attention models on settings traditionally dominated by convolutional models.

cs.CV↗

arXiv2021

Large Scale Interactive Motion Forecasting for Autonomous Driving : The Waymo Open Motion Dataset

As autonomous driving systems mature, motion forecasting has received increasing attention as a critical requirement for planning. Of particular importance are interactive situations such as merges, unprotected turns, etc., where predicting individual object motion is not sufficient. Joint predictions of multiple objects are required for effective route planning. There has been a critical need for high-quality motion data that is rich in both interactions and annotation to develop motion planning models. In this work, we introduce the most diverse interactive motion dataset to our knowledge, and provide specific labels for interacting objects suitable for developing joint prediction models. With over 100,000 scenes, each 20 seconds long at 10 Hz, our new dataset contains more than 570 hours of unique data over 1750 km of roadways. It was collected by mining for interesting interactions between vehicles, pedestrians, and cyclists across six cities within the United States. We use a high-accuracy 3D auto-labeling system to generate high quality 3D bounding boxes for each road agent, and provide corresponding high definition 3D maps for each scene. Furthermore, we introduce a new set of metrics that provides a comprehensive evaluation of both single agent and joint agent interaction motion forecasting models. Finally, we provide strong baseline models for individual-agent prediction and joint-prediction. We hope that this new large-scale interactive motion dataset will provide new opportunities for advancing motion forecasting models.

cs.CV↗

arXiv2021

Revisiting ResNets: Improved Training and Scaling Strategies

Novel computer vision architectures monopolize the spotlight, but the impact of the model architecture is often conflated with simultaneous changes to training methodology and scaling strategies. Our work revisits the canonical ResNet (He et al., 2015) and studies these three aspects in an effort to disentangle them. Perhaps surprisingly, we find that training and scaling strategies may matter more than architectural changes, and further, that the resulting ResNets match recent state-of-the-art models. We show that the best performing scaling strategy depends on the training regime and offer two new scaling strategies: (1) scale model depth in regimes where overfitting can occur (width scaling is preferable otherwise); (2) increase image resolution more slowly than previously recommended (Tan & Le, 2019). Using improved training and scaling strategies, we design a family of ResNet architectures, ResNet-RS, which are 1.7x - 2.7x faster than EfficientNets on TPUs, while achieving similar accuracies on ImageNet. In a large-scale semi-supervised learning setup, ResNet-RS achieves 86.2% top-1 ImageNet accuracy, while being 4.7x faster than EfficientNet NoisyStudent. The training techniques improve transfer performance on a suite of downstream tasks (rivaling state-of-the-art self-supervised algorithms) and extend to video classification on Kinetics-400. We recommend practitioners use these simple revised ResNets as baselines for future research.

cs.CV↗

arXiv2021

Pseudo-labeling for Scalable 3D Object Detection

To safely deploy autonomous vehicles, onboard perception systems must work reliably at high accuracy across a diverse set of environments and geographies. One of the most common techniques to improve the efficacy of such systems in new domains involves collecting large labeled datasets, but such datasets can be extremely costly to obtain, especially if each new deployment geography requires additional data with expensive 3D bounding box annotations. We demonstrate that pseudo-labeling for 3D object detection is an effective way to exploit less expensive and more widely available unlabeled data, and can lead to performance gains across various architectures, data augmentation strategies, and sizes of the labeled dataset. Overall, we show that better teacher models lead to better student models, and that we can distill expensive teachers into efficient, simple students. Specifically, we demonstrate that pseudo-label-trained student models can outperform supervised models trained on 3-10 times the amount of labeled examples. Using PointPillars [24], a two-year-old architecture, as our student model, we are able to achieve state of the art accuracy simply by leveraging large quantities of pseudo-labeled data. Lastly, we show that these student models generalize better than supervised models to a new domain in which we only have unlabeled data, making pseudo-label training an effective form of unsupervised domain adaptation.

cs.CV↗