arXiv subjects

Jose Ignacio Arroyo

Publications and source records attributed to Jose Ignacio Arroyo.

3 recordsLinked to original sources

arXiv2026

Toward a general theory for the universality and scaling in critical thermal responses in biology

We developed a theory showing that under appropriate normalizations and rescalings, temperature response curves show a remarkably regular behavior and follow a general, universal law. The impressive universality of temperature response curves remained hidden due to various curve-fitting models not well-grounded in first principles. In addition, this framework has the potential to explain the origin of different scaling relationships in thermal performance in biology, from molecules to ecosystems. Here, we summarize the background, principles and assumptions, predictions, implications, and possible extensions of this theory.

q-bio.OT↗

arXiv2026

Scaling Laws for Function Diversity and Specialization Across Socioeconomic and Biological Complex Systems

Function diversity, the range of tasks individuals perform, and specialization, the distribution of function abundances, are fundamental to complex adaptive systems. In the absence of overarching principles, these properties have appeared domain-specific. Here, we introduce an empirical framework and a mathematical model for the diversification and specialization of functions across disparate systems, including bacteria, federal agencies, universities, corporations, and cities. We find that the number of functions grows sublinearly with system size, with exponents from 0.35 to 0.57, consistent with Heaps' Law. In contrast, cities exhibit logarithmic scaling. To explain these empirical findings, we generalize the Yule-Simon model by introducing two key parameters: a diversification parameter that characterizes how existing functions inhibit the creation of new ones, and a specialization parameter that describes how a function's attractiveness depends on its abundance. Our model enables cross-system comparisons, from microorganisms to metropolitan areas. The analysis suggests that what drives the creation of new functions depends on the system's goals and structure: federal agencies tend to ensure comprehensive coverage of necessary functions; cities tend to slow the creation of new occupations as existing ones expand; and cells occupy an intermediate position. Once functions are introduced, their growth follows a remarkably universal pattern across all systems.

physics.soc-ph↗

arXiv2025

A generative model of function growth explains hidden self-similarities across biological and social systems

From genomes and ecosystems to bureaucracies and cities, the growth of complex systems occurs by adding new types of functions and expanding existing ones. We present a simple generative model that generalizes the Yule-Simon process by including: (i) a size-dependent probability of introducing new functions, and (ii) a generalized preferential attachment mechanism for expanding existing ones. We uncover a shared underlying structure that helps explain how function diversity evolves in empirical observations, such as prokaryotic proteomes, U.S. federal agencies, and urban economies. We show that real systems are often best represented as having non-Zipfian rank-frequency distributions, driven by sublinear preferential attachment, whilst still maintaining power-law scaling in their abundance distributions. Furthermore, our analytics explain five distinct phases of the organization of functional elements across complex systems. The model integrates empirical findings regarding the logarithmic growth of diversity in cities and the self-similarity of their rank-frequency distributions. Self-similarity previously observed in the rank-frequency distributions of cities is not observed in cells and federal agencies -- however, under a rescaling relative to the total diversity, all systems admit self-similar structures predicted by our theory.

physics.soc-ph↗