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Joseph Bavaria

Publications and source records attributed to Joseph Bavaria.

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Biomechanically Informed Image Registration for Patient-Specific Aortic Valve Strain Analysis

Aortic valve (AV) biomechanics play a critical role in maintaining normal cardiac function. Pathological variations, particularly in bicuspid aortic valves, alter leaflet loading, increase strain, and accelerate disease progression. Accurate patient-specific characterization of valve geometry and deformation is therefore essential for predicting disease progression and guiding durable repair. Current imaging and computational methods often fail to capture rapid valve motion and complex patient-specific features, limiting precise biomechanical assessment. To address these limitations, we developed an image registration framework coupled with the finite element method (FEM) to improve AV tracking and biomechanical evaluation. The valve geometries derived from 4D echocardiography and CT were used to simulate AV closure and generate intermediate deformation states. These FEM-generated states facilitated leaflet tracking, while image registration corrected misalignment between simulations and imaging data. In 20 patients, FEM-augmented registration improved accuracy by 40% compared with direct registration. This improvement enabled more reliable strain estimation by measuring leaflet deformation directly from imaging and reducing uncertainties associated with boundary conditions and material assumptions. Areal, Green-Lagrange, and deviatoric strains were quantified in adult trileaflet/bicuspid valves, as well as pediatric patients, revealing distinct deformation patterns across valve groups. Convergence in mean deviatoric strain between adult trileaflet and pediatric valves suggests volumetric deformation underlies age- and size-related differences in AV mechanics. The FEM-augmented registration enhances tracking and biomechanical evaluation accuracy, providing clinically relevant insights into patient-specific AV deformation to support individualized medical and intervention planning.

q-bio.QM

Towards Patient-Specific Surgical Planning for Bicuspid Aortic Valve Repair: Fully Automated Segmentation of the Aortic Valve in 4D CT

The bicuspid aortic valve (BAV) is the most prevalent congenital heart defect and may require surgery for complications such as stenosis, regurgitation, and aortopathy. BAV repair surgery is effective but challenging due to the heterogeneity of BAV morphology. Multiple imaging modalities can be employed to assist the quantitative assessment of BAVs for surgical planning. Contrast-enhanced 4D computed tomography (CT) produces volumetric temporal sequences with excellent contrast and spatial resolution. Segmentation of the aortic cusps and root in these images is an essential step in creating patient specific models for visualization and quantification. While deep learning-based methods are capable of fully automated segmentation, no BAV-specific model exists. Among valve segmentation studies, there has been limited quantitative assessment of the clinical usability of the segmentation results. In this work, we developed a fully automated multi-label BAV segmentation pipeline based on nnU-Net. The predicted segmentations were used to carry out surgically relevant morphological measurements including geometric cusp height, commissural angle and annulus diameter, and the results were compared against manual segmentation. Automated segmentation achieved average Dice scores of over 0.7 and symmetric mean distance below 0.7 mm for all three aortic cusps and the root wall. Clinically relevant benchmarks showed good consistency between manual and predicted segmentations. Overall, fully automated BAV segmentation of 3D frames in 4D CT can produce clinically usable measurements for surgical risk stratification, but the temporal consistency of segmentations needs to be improved.

eess.IV