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Joshua J. Turner

Publications and source records attributed to Joshua J. Turner.

At least 19 recordsLinked to original sources

Posterior Inference of Hamiltonian Parameters from RIXS Spectroscopy

We present the first application of simulation-based inference to resonant inelastic X-ray scattering spectroscopy. Using truncated marginal neural ratio estimation to efficiently restrict the prior and conditional flow matching as the joint density estimator, we infer full posteriors with a modest simulation budget for two Ni$^{2+}$ compounds---NiPS$_3$ as a representative covalent case and K$_2$NiF$_4$ as a more atomic one. We demonstrate that a vision transformer encoder whose tokenization matches the physical layout of the RIXS map yields better-covered and sharper posteriors than generic image encoders. Applying the validated method to experimental NiPS$_3$ and K$_2$NiF$_4$ data, we recover a joint posterior that reveals parameter correlations invisible to point estimators, and a posterior predictive distribution that closely matches the observed spectrum. The amortized posterior unlocks a class of analyses not previously available to the field such as nuisance-marginalized uncertainty quantification, multi-measurement posterior fusion and active experimental design.

cond-mat.str-el

Observation geometry for uncertainty-aware Hamiltonian inference and experimental design in quantum magnets

Determining microscopic interactions from spectroscopic and scattering measurements is central to understanding quantum materials, yet it often remains unclear which interactions can be reliably revealed by the available experimental data and how additional experimental modalities should be designed to resolve the remaining ambiguities. Here we present an artificial intelligence-enabled framework for uncertainty-aware Hamiltonian inference and adaptive experimental design. By combining Hamiltonian-conditioned neural surrogates with Bayesian inference and observation geometry, the framework characterizes how measurements constrain Hamiltonian parameter space, quantifies the identifiability of microscopic interactions, and propagates posterior uncertainty directly in the physical Hamiltonian parameter space rather than an abstract learned representation. Using multimodal powder and single-crystal inelastic neutron scattering measurements of the quantum magnet NiPS$_{3}$, we demonstrate physically interpretable Hamiltonian inference, modality-aware uncertainty quantification, and adaptive experimental design. The framework provides a general strategy for uncertainty-aware microscopic characterization and multimodal experimental design across quantum materials.

cond-mat.str-el

Multi-resolution Enhancement for Full Spectrum Neural Representations

Scientific data acquisition continues to outpace storage and analysis capabilities, making voxel-based representations increasingly intractable. Implicit neural representations (INRs) offer a promising solution by encoding signals through coordinate-based neural networks, serving as surrogates of data, with computational and storage requirements scaling with network complexity rather than data dimensionality. However, smaller INRs struggle to faithfully represent the multi-scale structures, high-frequency information, and fine textures that constitute a large proportion of scientific measurements. We propose WIEN-INR, a theoretically-guided hierarchical INR framework that distributes modeling across resolution scales and enables improved representation capacity through a novel enhancement network to recover subtle details. This multi-scale architecture allows smaller networks to retain the full spectrum of information while preserving training efficiency and lowering storage cost. Evaluated on distinct raw experimental measurements across scales and complexities, WIEN-INR represents a practical step toward broader adoption of neural representations in scientific workflows, delivering compact, robust, and high-fidelity representations.

cs.LG

Universal Magnetic Structure Prediction from Atomic Coordinates with Near-Experimental Accuracy

Magnetic order is a fundamental property of materials, governing collective behavior and enabling a broad range of functionalities. Yet magnetic structure remains difficult to determine: experiments are costly and specialized, while first-principles methods often struggle with the noncollinear and incommensurate orders found in real materials. Here we introduce magnetic structure network (MSN), an E(3) equivariant graph neural network that predicts both collinear and non-collinear magnetic structures directly from atomic crystal structures, trained directly on experimentally determined structures from MAGNDATA. By proposing the primitive modulated structure representation (PMSR), we are able to encode commensurate and incommensurate structures in a unified way without symmetry assumptions. The model achieves strong performance across all modulation components and reconstructs experimental magnetic structures with high fidelity. Our approach provides a scalable framework for rapid magnetic structure prediction and opens a route to data-driven discovery of magnetic materials.

cond-mat.mtrl-sci

The chemRIXS Instrument for the LCLS-II X-Ray Free Electron Laser

The chemRIXS instrument at the Linac Coherent Light Source offers new opportunities for studying solution-phase systems with time-resolved soft X-ray spectroscopy through the recently commissioned high-repetition-rate LCLS-II X-ray free electron laser. The orders-of-magnitude X-ray flux improvement provided by the superconducting accelerator, combined with corresponding advances in the optical laser system and the liquid jet recirculation system, enables studies on dilute systems with high signal-to-noise compared to what was possible with the LCLS-I copper accelerator. These capabilities open up time-resolved X-ray absorption spectroscopy and resonant inelastic X-ray scattering to entirely new classes of samples, as well as enabling the development of new soft X-ray spectroscopies on liquid samples. An overview of the beamline components and the first LCLS-II commissioning results are presented.

physics.ins-det

femto-PIXAR: a neural network method for reconstruction of femtosecond X-ray free electron laser pulse energy

X-ray Free Electron Lasers (X\nobreakdash-FELs) operate in a wide range of lasing configurations for a broad variety of scientific applications at ultrafast time-scales such as structural biology, materials science, and atomic and molecular physics. Shot-by-shot characterization of the X-FEL pulses is crucial for analysis of many experiments as well as tuning the X-FEL performance. However, for the weak pulses found in advanced configurations, e.g. those needed for coherent, two-pulse studies of quantum materials, there is no current method for reliably resolving pulse profiles. Here we show that a physics-based U-net model can reconstruct the individual pulse power profiles for sub-picosecond pulse separation without the need for simulations. Using experimental data from weak X-FEL pulse pairs, we demonstrate we can learn the pulse characteristics on a shot-by-shot basis when conventional methods fail.

physics.acc-ph

Physics-Guided Dual Implicit Neural Representations for Source Separation

Significant challenges exist in efficient data analysis of most advanced experimental and observational techniques because the collected signals often include unwanted contributions--such as background and signal distortions--that can obscure the physically relevant information of interest. To address this, we have developed a self-supervised machine-learning approach for source separation using a dual implicit neural representation framework that jointly trains two neural networks: one for approximating distortions of the physical signal of interest and the other for learning the effective background contribution. Our method learns directly from the raw data by minimizing a reconstruction-based loss function without requiring labeled data or pre-defined dictionaries. We demonstrate the effectiveness of our framework by considering a challenging case study involving large-scale simulated as well as experimental momentum-energy-dependent inelastic neutron scattering data in a four-dimensional parameter space, characterized by heterogeneous background contributions and unknown distortions to the target signal. The method is found to successfully separate physically meaningful signals from a complex or structured background even when the signal characteristics vary across all four dimensions of the parameter space. An analytical approach that informs the choice of the regularization parameter is presented. Our method offers a versatile framework for addressing source separation problems across diverse domains, ranging from superimposed signals in astronomical measurements to structural features in biomedical image reconstructions.

cs.CV

3D Heisenberg universality in the Van der Waals antiferromagnet NiPS$_3$

Van der Waals (vdW) magnetic materials are comprised of layers of atomically thin sheets, making them ideal platforms for studying magnetism at the two-dimensional (2D) limit. These materials are at the center of a host of novel types of experiments, however, there are notably few pathways to directly probe their magnetic structure. We report the magnetic order within a single crystal of NiPS$_3$ and show it can be accessed with resonant elastic X-ray diffraction along the edge of the vdW planes in a carefully grown crystal by detecting structurally forbidden resonant magnetic X-ray scattering. We find the magnetic order parameter has a critical exponent of $β\sim0.36$, indicating that the magnetism of these vdW crystals is more adequately characterized by the three-dimensional (3D) Heisenberg universality class. We verify these findings with first-principle density functional theory, Monte-Carlo simulations, and density matrix renormalization group calculations.

cond-mat.str-el

Using magnetic dynamics to measure the spin gap in a candidate Kitaev material

Materials potentially hosting Kitaev spin-liquid states are considered crucial for realizing topological quantum computing. However, the intricate nature of spin interactions within these materials complicates the precise measurement of low-energy spin excitations indicative of fractionalized excitations. Using Na$_{2}$Co$_2$TeO$_{6}$ as an example, we study these low-energy spin excitations using the time-resolved resonant elastic x-ray scattering (tr-REXS). Our observations unveil remarkably slow spin dynamics at the magnetic peak, whose recovery timescale is several nanoseconds. This timescale aligns with the extrapolated spin gap of $\sim$ 1 $μ$eV, obtained by density matrix renormalization group (DMRG) simulations in the thermodynamic limit. The consistency demonstrates the efficacy of tr-REXS in discerning low-energy spin gaps inaccessible to conventional spectroscopic techniques.

cond-mat.str-el

Self-Supervised Generative Models for Crystal Structures

Drawing inspiration from the achievements of natural language processing, we adopt self-supervised learning and utilize an equivariant graph neural network to develop a unified platform designed for training generative models capable of generating crystal structures, as well as efficiently adapting to downstream tasks in material property prediction. To mitigate the challenge of incorporating large-scale assessment on the reliability of generated structures into the training process, we utilize the generative adversarial network (GAN) with its discriminator being a cost-effective evaluator for the generated structures, resulting in notable improvements in model performance. We demonstrate the utility of our model in finding the optimal crystal structure under predefined conditions. Without reliance on properties acquired experimentally or numerically, our model further displays its capability to comprehend the mechanism of crystal structure formation through its ability to grouping chemically similar elements. Therefore, this paper extends an invitation to explore deeper into the scientific understanding of material structures through generative models, offering a fresh perspective on broadening the scope and efficacy of machine learning in material science.

cond-mat.mtrl-sci

Kitaev physics in the two-dimensional magnet NiPSe$_3$

The Kitaev interaction, found in candidate materials such as $α$-RuCl$_3$, occurs through the metal ($M$)-ligand ($X$)-metal ($M$) paths of the edge-sharing octahedra because the large spin-orbit coupling (SOC) on the metal atoms activates directional spin interactions. Here, we show that even in $3d$ transition-metal compounds, where the SOC of the metal atom is negligible, heavy ligands can induce bond-dependent Kitaev interactions. In this work, we take as an example the $3d$ transition-metal chalcogenophosphate NiPSe$_3$ and show that the key is found in the presence of a sizable SOC on the Se $p$ orbital, one which mediates the super-exchange between the nearest-neighbor Ni sites. Our study provides a pathway for engineering enhanced Kitaev interactions through the interplay of SOC strength, lattice distortions, and chemical substitutions.

cond-mat.str-el

Augmenting x-ray single particle imaging reconstruction with self-supervised machine learning

The development of X-ray Free Electron Lasers (XFELs) has opened numerous opportunities to probe atomic structure and ultrafast dynamics of various materials. Single Particle Imaging (SPI) with XFELs enables the investigation of biological particles in their natural physiological states with unparalleled temporal resolution, while circumventing the need for cryogenic conditions or crystallization. However, reconstructing real-space structures from reciprocal-space x-ray diffraction data is highly challenging due to the absence of phase and orientation information, which is further complicated by weak scattering signals and considerable fluctuations in the number of photons per pulse. In this work, we present an end-to-end, self-supervised machine learning approach to recover particle orientations and estimate reciprocal space intensities from diffraction images only. Our method demonstrates great robustness under demanding experimental conditions with significantly enhanced reconstruction capabilities compared with conventional algorithms, and signifies a paradigm shift in SPI as currently practiced at XFELs.

cs.CV

Orbital-selective time-domain signature of nematicity dynamics in the charge-density-wave phase of La$_{1.65}$Eu$_{0.2}$Sr$_{0.15}$CuO$_4$

Understanding the interplay between charge, nematic, and structural ordering tendencies in cuprate superconductors is critical to unraveling their complex phase diagram. Using pump-probe time-resolved resonant x-ray scattering on the (0 0 1) Bragg peak at the Cu $L_3$ and O $K$ resonances, we investigate non-equilibrium dynamics of $Q_a = Q_b = 0$ nematic order and its association with both charge density wave (CDW) order and lattice dynamics in La$_{1.65}$Eu$_{0.2}$Sr$_{0.15}$CuO$_4$. The orbital selectivity of the resonant x-ray scattering cross-section allows nematicity dynamics associated with the planar O 2$p$ and Cu 3$d$ states to be distinguished from the response of anisotropic lattice distortions. A direct time-domain comparison of CDW translational-symmetry breaking and nematic rotational-symmetry breaking reveals that these broken symmetries remain closely linked in the photoexcited state, consistent with the stability of CDW topological defects in the investigated pump fluence regime.

cond-mat.str-el

Kernel Fusion in Atomistic Spin Dynamics Simulations on Nvidia GPUs using Tensor Core

In atomistic spin dynamics simulations, the time cost of constructing the space- and time-displaced pair correlation function in real space increases quadratically as the number of spins $N$, leading to significant computational effort. The GEMM subroutine can be adopted to accelerate the calculation of the dynamical spin-spin correlation function, but the computational cost of simulating large spin systems ($>40000$ spins) on CPUs remains expensive. In this work, we perform the simulation on the graphics processing unit (GPU), a hardware solution widely used as an accelerator for scientific computing and deep learning. We show that GPUs can accelerate the simulation up to 25-fold compared to multi-core CPUs when using the GEMM subroutine on both. To hide memory latency, we fuse the element-wise operation into the GEMM kernel using $\mathtt{CUTLASS}$ that can improve the performance by 26% $\sim$ 33% compared to implementation based on $\mathtt{cuBLAS}$. Furthermore, we perform the on-the-fly calculation in the epilogue of the GEMM subroutine to avoid saving intermediate results on global memory, which makes the large-scale atomistic spin dynamics simulation feasible and affordable.

physics.comp-ph

Machine learning enabled experimental design and parameter estimation for ultrafast spin dynamics

Advanced experimental measurements are crucial for driving theoretical developments and unveiling novel phenomena in condensed matter and material physics, which often suffer from the scarcity of facility resources and increasing complexities. To address the limitations, we introduce a methodology that combines machine learning with Bayesian optimal experimental design (BOED), exemplified with x-ray photon fluctuation spectroscopy (XPFS) measurements for spin fluctuations. Our method employs a neural network model for large-scale spin dynamics simulations for precise distribution and utility calculations in BOED. The capability of automatic differentiation from the neural network model is further leveraged for more robust and accurate parameter estimation. Our numerical benchmarks demonstrate the superior performance of our method in guiding XPFS experiments, predicting model parameters, and yielding more informative measurements within limited experimental time. Although focusing on XPFS and spin fluctuations, our method can be adapted to other experiments, facilitating more efficient data collection and accelerating scientific discoveries.

cond-mat.mtrl-sci

A High-Performance Implementation of Atomistic Spin Dynamics Simulations on x86 CPUs

Atomistic spin dynamics simulations provide valuable information about the energy spectrum of magnetic materials in different phases, allowing one to identify instabilities and the nature of their excitations. However, the time cost of evaluating the dynamical correlation function $S(\mathbf{q}, t)$ increases quadratically as the number of spins $N$, leading to significant computational effort, making the simulation of large spin systems very challenging. In this work, we propose to use a highly optimized general matrix multiply (GEMM) subroutine to calculate the dynamical spin-spin correlation function that can achieve near-optimal hardware utilization. Furthermore, we fuse the element-wise operations in the calculation of $S(\mathbf{q}, t)$ into the in-house GEMM kernel, which results in further performance improvements of 44\% - 71\% on several relatively large lattice sizes when compared to the implementation that uses the GEMM subroutine in OpenBLAS, which is the state-of-the-art open source library for Basic Linear Algebra Subroutine (BLAS).

physics.comp-ph

Testing the data framework for an AI algorithm in preparation for high data rate X-ray facilities

The advent of next-generation X-ray free electron lasers will be capable of delivering X-rays at a repetition rate approaching 1 MHz continuously. This will require the development of data systems to handle experiments at these type of facilities, especially for high throughput applications, such as femtosecond X-ray crystallography and X-ray photon fluctuation spectroscopy. Here, we demonstrate a framework which captures single shot X-ray data at the LCLS and implements a machine-learning algorithm to automatically extract the contrast parameter from the collected data. We measure the time required to return the results and assess the feasibility of using this framework at high data volume. We use this experiment to determine the feasibility of solutions for `live' data analysis at the MHz repetition rate.

physics.data-an

A machine learning photon detection algorithm for coherent X-ray ultrafast fluctuation analysis

X-ray free electron laser (XFEL) experiments have brought unique capabilities and opened new directions in research, such as creating new states of matter or directly measuring atomic motion. One such area is the ability to use finely spaced sets of coherent x-ray pulses to be compared after scattering from a dynamic system at different times. This enables the study of fluctuations in many-body quantum systems at the level of the ultrafast pulse durations, but this method has been limited to a select number of examples and required complex and advanced analytical tools. By applying a new methodology to this problem, we have made qualitative advances in three separate areas that will likely also find application to new fields. As compared to the `droplet-type' models which typically are used to estimate the photon distributions on pixelated detectors to obtain the coherent X-ray speckle patterns, our algorithm pipeline achieves an order of magnitude speedup on CPU hardware and two orders of magnitude improvement on GPU hardware. We also find that it retains accuracy in low-contrast conditions, which is the typical regime for many experiments in structural dynamics. Finally, it can predict photon distributions in high average-intensity applications, a regime which up until now, has not been accessible. Our AI-assisted algorithm will enable a wider adoption of x-ray coherence spectroscopies, by both automating previously challenging analyses and enabling new experiments that were not otherwise feasible without the developments described in this work.

physics.data-an