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Juan Xie

Publications and source records attributed to Juan Xie.

6 recordsLinked to original sources

FreqAnchorAD: Language-Free Zero-Shot Anomaly Detection via Frequency-Deviation Anchoring

Zero-shot anomaly detection (ZSAD) aims to detect anomalies and localize defective regions in unseen target domains without target training data. Recent ZSAD methods build on pretrained vision models, particularly CLIP, and construct normal and anomaly references from textual prompts or learnable visual representations. These methods perform anomaly discrimination primarily in spatial feature spaces, where subtle changes in texture, boundaries, and local structures can be confused with normal appearance variations. Although inconspicuous spatially, such defects can disrupt local texture regularity or boundary continuity, inducing response deviations across frequency bands. However, existing ZSAD methods do not explicitly model these frequency-dependent characteristics. Our image-domain analysis reveals that local defects exhibit spatial-frequency deviations from normal references across low-, middle-, and high-frequency bands, indicating that anomaly evidence is not universally dominated by high-frequency responses. Motivated by this observation, we propose FreqAnchorAD, a frequency-aware framework that organizes frequency-enhanced responses for anchor-relative anomaly discrimination. Specifically, the Local Frequency Compensation Module (LFCM) enhances intermediate patch tokens with local spatial-frequency cues. The Frequency-Deviation Anchor Projector (FDAP), our core discrimination module, organizes enhanced responses along a source-derived channel coordinate and measures anomaly evidence through relative similarity to normal and anomaly anchors. Finally, Asymmetric Anchor Supervision (AAS) stabilizes normal-anchor alignment while preserving diverse anomaly patterns. Experiments on thirteen industrial and medical benchmarks show that FreqAnchorAD achieves state-of-the-art mean performance in image-level anomaly recognition and pixel-level defect localization.

cs.CV

CoGeoAD: Hierarchical Color-Geometric Fusion with Multi-View Attention for Zero-Shot 3D Anomaly Detection

Zero-shot 3D anomaly detection is essential for industrial quality inspection, where labeled anomaly samples are scarce. Meanwhile, existing methods lack an effective mechanism to fuse complementary 2D color images with 3D geometric structures, limiting their ability to detect both surface and structural defects in a unified framework. To address these issues, we propose CoGeoAD, a unified CLIP-based framework that fuses color and geometric features by constructing pixel-aligned paired multi-view images. The framework introduces a Data-Driven Multi-View Attention (MVA) mechanism to adaptively aggregate 3D features and a Multi-Stage Color-Geometric Fusion (MS-CGF) module to hierarchically integrate multi-level features from both modalities. Extensive experiments on the MVTec3D-AD and Eyecandies benchmarks demonstrate that CoGeoAD achieves state-of-the-art performance, effectively capturing both structural and textural anomalies in complex industrial scenarios. our source code is available at https://github.com/kingdomShu/CoGeoAD.

cs.CV

Robust Ultra-High-Dimensional Variable Selection With Correlated Structure Using Group Testing

Background: High-dimensional genomic data exhibit strong group correlation structures that challenge conventional feature selection methods, which often assume feature independence or rely on pre-defined pathways and are sensitive to outliers and model misspecification. Methods: We propose the Dorfman screening framework, a multi-stage procedure that forms data-driven variable groups via hierarchical clustering, performs group and within-group hypothesis testing, and refines selection using elastic net or adaptive elastic net. Robust variants incorporate OGK-based covariance estimation, rank-based correlation, and Huber-weighted regression to handle contaminated and non-normal data. Results: In simulations, Dorfman-Sparse-Adaptive-EN performed best under normal conditions, while Robust-OGK-Dorfman-Adaptive-EN showed clear advantages under data contamination, outperforming classical Dorfman and competing methods. Applied to NSCLC gene expression data for trametinib response, robust Dorfman methods achieved the lowest prediction errors and enriched recovery of clinically relevant genes. Conclusions: The Dorfman framework provides an efficient and robust approach to genomic feature selection. Robust-OGK-Dorfman-Adaptive-EN offers strong performance under both ideal and contaminated conditions and scales to ultra-high-dimensional settings, making it well suited for modern genomic biomarker discovery.

cs.LG

Source-free Active Domain Adaptation for Diabetic Retinopathy Grading Based on Ultra-wide-field Fundus Image

Domain adaptation (DA) has been widely applied in the diabetic retinopathy (DR) grading of unannotated ultra-wide-field (UWF) fundus images, which can transfer annotated knowledge from labeled color fundus images. However, suffering from huge domain gaps and complex real-world scenarios, the DR grading performance of most mainstream DA is far from that of clinical diagnosis. To tackle this, we propose a novel source-free active domain adaptation (SFADA) in this paper. Specifically, we focus on DR grading problem itself and propose to generate features of color fundus images with continuously evolving relationships of DRs, actively select a few valuable UWF fundus images for labeling with local representation matching, and adapt model on UWF fundus images with DR lesion prototypes. Notably, the SFADA also takes data privacy and computational efficiency into consideration. Extensive experimental results demonstrate that our proposed SFADA achieves state-of-the-art DR grading performance, increasing accuracy by 20.9% and quadratic weighted kappa by 18.63% compared with baseline and reaching 85.36% and 92.38% respectively. These investigations show that the potential of our approach for real clinical practice is promising.

cs.CV

Statistical Power Analysis for Designing Bulk, Single-Cell, and Spatial Transcriptomics Experiments: Review, Tutorial, and Perspectives

Gene expression profiling technologies have been used in various applications such as cancer biology. The development of gene expression profiling has expanded the scope of target discovery in transcriptomic studies, and each technology produces data with distinct characteristics. In order to guarantee biologically meaningful findings using transcriptomic experiments, it is important to consider various experimental factors in a systematic way through statistical power analysis. In this paper, we review and discuss the power analysis for three types of gene expression profiling technologies from a practical standpoint, including bulk RNA-seq, single-cell RNA-seq, and high-throughput spatial transcriptomics. Specifically, we describe the existing power analysis tools for each research objective for each of the bulk RNA-seq and scRNA-seq experiments, along with recommendations. On the other hand, since there are no power analysis tools for high-throughput spatial transcriptomics at this point, we instead investigate the factors that can influence power analysis.

q-bio.GN

The citation advantage of foreign language references for Chinese social science papers

Contemporary scientific exchanges are international, yet language continues to be a persistent barrier to scientific communication, particularly for non-native English-speaking scholars. Since the ability to absorb knowledge has a strong impact on how researchers create new scientific knowledge, a comprehensive access to and understanding of both domestic and international scientific publications is essential for scientific performance. This study explores the effect of absorbed knowledge on research impact by analyzing the relationship between the language diversity of cited references and the number of citations received by the citing paper. Chinese social sciences are taken as the research object, and the data, 950,302 papers published between 1998 and 2013 with 8,151,327 cited references, were collected from the Chinese Social Sciences Citation Index. Results show that there is a stark increase in the consumption of foreign language material within the Chinese social science community, and English material accounts for the vast majority of this consumption. Papers with foreign language references receive significantly more citations than those without, and the citation advantage of these internationalized work holds when we control for characteristics of the citing papers. However, the citation advantage has decreased from 1998 to 2008, largely as an artifact of the increased number of papers citing foreign language material. After 2008, the decline of the citation advantage subsided and became relatively stable, which suggests that incorporating foreign language literature continues to increase scientific impact, even as the scientific community itself becomes increasingly international. However, internationalization is not without concerns: the work closes with a discussion of the benefits and potential problems of the lack of linguistic diversity in scientific communication.

cs.DL