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Junyuan Zhang

Publications and source records attributed to Junyuan Zhang.

18 recordsLinked to original sources

Population Metrology of a Hidden Exciton Reservoir: Quasi-Thermalization versus Localization

Long-lived dark states can dominate the lowest-energy manifold of optically driven quantum materials, yet their occupation remains difficult to quantify, leaving it unclear whether it reflects thermal redistribution or kinetic trapping. We combine microsphere-enabled far-field access with quantitative optical-response calibration to retrieve dark-to-bright population ratios in monolayer WSe2. Temperature-dependent measurements and controlled defect enhancement separate mobile and localized contributions. Near room temperature, the mobile dark-to-bright ratio reaches approximately 65% of its Boltzmann limit, indicating substantial but incomplete quasi-thermalization, whereas the low-temperature excess is dominated by defect-assisted localization. Dark-state dominance alone therefore does not establish equilibration, a distinction essential for interpreting transport and collective phases in optically hidden quasiparticle reservoirs.

physics.optics

BGA: A noise-immune neural distillation framework for malicious signature extraction in high-entropy encrypted flows

To mitigate attention dilution in high-entropy TLS 1.3 flows, we propose BGA, a noise-immune neural distillation framework for encrypted threat intelligence.The methodology first employs Analysis of Variance (ANOVA) to decouple high-discriminatory control-plane features - specifically industrial setpoints - from stochastic cryptographic noise. To resolve the extreme class imbalance within a corpus of 86,878 flow records, a Wasserstein GAN with Gradient Penalty (WGAN-GP) module, enforcing the 1-Lipschitz constraint, is integrated to synthesize high-fidelity minority samples, elevating the detection recall of rare Malicious State Command Injections(MSCI) attacks by 43.2%. At its core, the BGA architecture integrates Bidirectional Long Short-Term Memory (BiLSTM) for temporal dependency extraction and an Adaptive Gated Multi-Head Attention mechanism. This gated unit functions as a neural filter to dynamically suppress encryption artifacts while amplifying malicious signatures. Extensive evaluations on CIC-IDS-2018 and Edge-IIoT benchmarks demonstrate a performance ceiling exceeding 95.2% across all key metrics. Furthermore, noise-injection stress tests confirm BGAs superior structural resilience with a 8.57% performance margin over vanilla Transformers, while its ultra-low inference latency of 0.2820 ms (estimated 1.6920 ms via theoretical scaling for ARM) indicates a high potential for real-time feasibility on heterogeneous industrial edge gateways, providing a promising architectural baseline for future hardware implementation.

cs.CR

Understanding Backdoor Vulnerabilities in Vertical Federated Learning: The Gap Between Research and Practice

Vertical Federated Learning (VFL) enables organizations holding complementary features of shared entities to collaborate and train models. In this setting, the initiator can withhold information about the learning task, while other contributors participate without exposing their local datasets, creating an asymmetric information structure aligned with growing privacy demands. However, this asymmetry is a double-edged sword. Among various threats, backdoor attacks are particularly concerning because VFL not only enables malicious contributors to poison the model during training, but also allows them to activate the backdoor at inference time to manipulate predictions. Although prior work has reported near-perfect attack success rates and proposed effective defenses, we find that most findings fail to hold under realistic conditions, exposing a fundamental gap between research and practice. In this paper, we present a systematic, practice-oriented study of backdoor vulnerabilities in VFL, revealing this gap in both methodological design and evaluation practices. We show that existing approaches overlook key practical constraints and therefore rely on unrealistic prior knowledge. Furthermore, these limitations have remained hidden due to poorly designed evaluation practices in the literature. To bridge this gap, we redefine threat models under realistic constraints, propose practical backdoor workflows, and introduce BVBench, a backdoor-centric benchmark that enables fair, practical, and comprehensive evaluation, preloaded with state-of-the-art baselines. BVBench provides strong evidence of the fragility of the current understanding of VFL backdoor risks and establishes a foundation for steering research toward uncovering practical vulnerabilities and developing more meaningful defenses.

cs.LG

TCellAlign: Cross-study T-cell Populations Alignment with Nomenclature-Guided Multi-Agent Workflow

Cell type standardization plays a central role in integrating biological knowledge across single-cell studies. While standardized resources (e.g., Cell Ontology, Nomenclature Frameworks) provide unified vocabularies of cell populations, scientific publications and public datasets continue to use heterogeneous study-specific labels, making cross-study comparison difficult even when biologically equivalent cell populations are described. In this work, we are the first to formulate this challenge as an evidence-grounded cell population alignment problem and propose TCellAlign, a multi-agent framework that includes literature retrieval, information extraction, nomenclature-guided label alignment, and evidence-based adjudication. This modular design preserves the original terminology and supporting evidence reported by each study while producing standardized labels that can be compared across studies. We further construct a manually validated benchmark dataset linking study-specific labels, CZ CELLxGENE annotations, and standardized T-cell nomenclature across 44 manually curated, published studies (including over seven million cells) spanning four biological categories: healthy, cancer, infectious disease and inflammatory diseases. Across the evaluated tasks, TCellAlign achieves stronger semantic agreement than ontology-based baselines and maintains transcriptomic coherence with both open-source and closed-source large language models (LLM) backbones. By connecting literature, datasets, and expert's nomenclature, TCellAlign enables consistent interpretation of T-cell subtypes and states across studies, facilitating biological knowledge integration and the development of future foundation models built upon standardized cellular representations.

q-bio.QM

SWE-Manager: Selecting and Synthesizing Golden Proposals Before Coding

Large language model (LLM) research in software engineering has largely focused on tasks such as code generation and bug repair. In practice, teams often draft multiple candidate proposals for fixing an issue and then deliberate on one golden proposal for implementation. This selection requires not only assessing the issue's scope, impact, and urgency, but also a clear understanding of each proposal's strengths and weaknesses. A good selection could make issue resolution more reliable while reducing regression and operational risk, whereas a poor choice can increase risk and even cause unpredictable failures. We first conduct a manual study of real-world issues to characterize the rationales maintainers use when selecting among competing proposals. Motivated by these findings, we introduce SWE-Manager, a joint selection and synthesis approach that selects the best proposal and synthesizes a golden proposal. SWE-Manager is an 8B model trained via reinforcement learning (RL) to compare proposals, justify its choice, and synthesize a golden proposal for implementation. We view proposal selection as a reasoning task, mirroring how technical managers review competing proposals by weighing issue context and each proposal's solution without executing code or running tests. On the SWE-Lancer Manager benchmark, SWE-Manager achieves 53.21 selection accuracy and 57.75 earn rate, earning 152,750 dollars and outperforming strong baselines including GPT-5. To further evaluate the effectiveness of SWE-Manager in real-world issue resolution, we design the P2A framework, which simulates a real-world workflow where multiple proposals are drafted, reviewed, and a golden proposal is selected for implementation ...

cs.SE

A Dual Physics-Informed Kolmogorov-Arnold Neural Network Framework for Continuum Topology Optimization

In continuum topology optimization (TO), two essential procedures are involved: structural analysis through the solution of partial differential equations (PDEs) and the subsequent update of design variables. Both procedures can be addressed by training neural networks using the corresponding physical information. Accordingly, Physics-Informed Neural Network (PINN)-based algorithms have been developed for TO. However, PINN-based methods suffer from several notable limitations, including high computational cost, spectral bias, and limited adaptability in solving PDEs.To overcome these challenges, this study proposes a novel algorithm that incorporates two Higher-Order ReLU-based Kolmogorov-Arnold Networks (HRKANs). Specifically, a displacement-informed HRKAN (d-HRKAN) is designed to predict PDE solutions, while a sensitivity-informed HRKAN (s-HRKAN) is developed to perform sensitivity analysis for updating design variables. For convenience, the proposed approach is referred to as the Dual Physics-Informed Kolmogorov-Arnold Networks-based Topology Optimization (DPIKAN-TO) method. By leveraging learnable activation functions, the proposed neural networks can accurately approximate the responses of complex structural systems. Moreover, compared with conventional PINN-based methods, DPIKAN-TO demonstrates significantly improved computational efficiency and reduced computational cost. Numerical examples show that DPIKAN-TO can successfully identify optimal material layouts for linear structures, compliant mechanisms, and fluid-solid coupled systems. Furthermore, owing to the use of learnable activation functions, the proposed framework can be readily extended to structural optimization problems governed by new types of PDEs.

cs.CE

A Survey on the Safety and Security Threats of Computer-Using Agents: JARVIS or Ultron?

Recently, AI-driven interactions with computing devices have advanced from basic prototype tools to sophisticated, LLM-based systems that emulate human-like operations in graphical user interfaces. We are now witnessing the emergence of \emph{Computer-Using Agents} (CUAs), capable of autonomously performing tasks such as navigating desktop applications, web pages, and mobile apps. However, as these agents grow in capability, they also introduce novel safety and security risks. Vulnerabilities in LLM-driven reasoning, with the added complexity of integrating multiple software components and multimodal inputs, further complicate the security landscape. In this paper, we present a systematization of knowledge on the safety and security threats of CUAs. We conduct a comprehensive literature review and distill our findings along four research objectives: \textit{\textbf{(i)}} define the CUA that suits safety analysis; \textit{\textbf{(ii)} } categorize current safety threats among CUAs; \textit{\textbf{(iii)}} propose a comprehensive taxonomy of existing defensive strategies; \textit{\textbf{(iv)}} summarize prevailing benchmarks, datasets, and evaluation metrics used to assess the safety and performance of CUAs. Building on these insights, our work provides future researchers with a structured foundation for exploring unexplored vulnerabilities and offers practitioners actionable guidance in designing and deploying secure Computer-Using Agents.

cs.CL

Document Parsing Unveiled: Techniques, Challenges, and Prospects for Structured Information Extraction

Document parsing (DP) transforms unstructured or semi-structured documents into structured, machine-readable representations, enabling downstream applications such as knowledge base construction and retrieval-augmented generation (RAG). This survey provides a comprehensive and timely review of document parsing research. We propose a systematic taxonomy that organizes existing approaches into modular pipeline-based systems and unified models driven by Vision-Language Models (VLMs). We provide a detailed review of key components in pipeline systems, including layout analysis and the recognition of heterogeneous content such as text, tables, mathematical expressions, and visual elements, and then systematically track the evolution of specialized VLMs for document parsing. Additionally, we summarize widely adopted evaluation metrics and high-quality benchmarks that establish current standards for parsing quality. Finally, we discuss key open challenges, including robustness to complex layouts, reliability of VLM-based parsing, and inference efficiency, and outline directions for building more accurate and scalable document intelligence systems.

cs.MM

TRivia: Self-supervised Fine-tuning of Vision-Language Models for Table Recognition

Table recognition (TR) aims to transform table images into semi-structured representations such as HTML or Markdown. As a core component of document parsing, TR has long relied on supervised learning, with recent efforts dominated by fine-tuning vision-language models (VLMs) using labeled data. While VLMs have brought TR to the next level, pushing performance further demands large-scale labeled data that is costly to obtain. Consequently, although proprietary models have continuously pushed the performance boundary, open-source models, often trained with limited resources and, in practice, the only viable option for many due to privacy regulations, still lag far behind. To bridge this gap, we introduce TRivia, a self-supervised fine-tuning method that enables pretrained VLMs to learn TR directly from unlabeled table images in the wild. Built upon Group Relative Policy Optimization, TRivia automatically identifies unlabeled samples that most effectively facilitate learning and eliminates the need for human annotations through a question-answering-based reward mechanism. An attention-guided module generates diverse questions for each table image, and the ability to interpret the recognition results and answer them correctly provides feedback to optimize the TR model. This closed-loop process allows the TR model to autonomously learn to recognize, structure, and reason over tables without labeled data. Leveraging this pipeline, we present TRivia-3B, an open-sourced, compact, and state-of-the-art TR model that surpasses existing systems (e.g., Gemini 2.5 Pro, MinerU2.5) on three popular benchmarks. Model and code are released at: https://github.com/HKU-TASR/TRivia

cs.CV

Prune2Drive: A Plug-and-Play Framework for Accelerating Vision-Language Models in Autonomous Driving

Vision-Language Models (VLMs) have emerged as a promising paradigm in autonomous driving (AD), providing a unified framework for perception and decision-making. However, their real-world deployment is hindered by significant computational overhead when processing high-resolution, multi-view images. This complexity stems from the massive number of visual tokens, which increases inference latency and memory consumption due to the quadratic complexity of self-attention. To address these challenges, we propose Prune2Drive, a plug-and-play visual token pruning framework for multi-view VLMs in AD. Prune2Drive introduces two core innovations: (i) a diversity-aware token selection mechanism that prioritizes semantic and spatial coverage across views, and (ii) a view-adaptive pruning controller that automatically learns optimal pruning ratios based on camera importance to downstream tasks. Unlike prior methods, Prune2Drive requires no model retraining or access to attention maps, ensuring compatibility with modern efficient attention implementations. Extensive experiments on the DriveLM and DriveLMM-o1 benchmarks demonstrate that Prune2Drive achieves significant speedups and memory savings with minimal performance impact. When retaining only 10% of visual tokens, our method achieves a 6.40x speedup in the prefilling phase and consumes only 13.4% of the original FLOPs, with a mere 3% average performance drop on the DriveLM benchmark. Code is available at: https://github.com/MinhaoXiong/Prune2Drive.git

cs.CV

Confundo: Learning to Generate Robust Poison for Practical RAG Systems

Retrieval-augmented generation (RAG) is increasingly deployed in real-world applications, where its reference-grounded design makes outputs appear trustworthy. This trust has spurred research on poisoning attacks that craft malicious content, inject it into knowledge sources, and manipulate RAG responses. However, when evaluated in practical RAG systems, existing attacks suffer from severely degraded effectiveness. This gap stems from two overlooked realities: (i) content is often processed before use, which can fragment the poison and weaken its effect, and (ii) users often do not issue the exact queries anticipated during attack design. These factors can lead practitioners to underestimate risks and develop a false sense of security. To better characterize the threat to practical systems, we present Confundo, a learning-to-poison framework that fine-tunes a large language model as a poison generator to achieve high effectiveness, robustness, and stealthiness. Confundo provides a unified framework supporting multiple attack objectives, demonstrated by manipulating factual correctness, inducing biased opinions, and triggering hallucinations. By addressing these overlooked challenges, Confundo consistently outperforms a wide range of purpose-built attacks across datasets and RAG configurations by large margins, even in the presence of defenses. Beyond exposing vulnerabilities, we also present a defensive use case that protects web content from unauthorized incorporation into RAG systems via scraping, with no impact on user experience.

cs.CR

DOCR-Inspector: Fine-Grained and Automated Evaluation of Document Parsing with VLM

Document parsing aims to transform unstructured PDF images into semi-structured data, facilitating the digitization and utilization of information in diverse domains. While vision language models (VLMs) have significantly advanced this task, achieving reliable, high-quality parsing in real-world scenarios remains challenging. Common practice often selects the top-performing model on standard benchmarks. However, these benchmarks may carry dataset-specific biases, leading to inconsistent model rankings and limited correlation with real-world performance. Moreover, benchmark metrics typically provide only overall scores, which can obscure distinct error patterns in output. This raises a key challenge: how can we reliably and comprehensively assess document parsing quality in the wild? We address this problem with DOCR-Inspector, which formalizes document parsing assessment as fine-grained error detection and analysis. Leveraging VLM-as-a-Judge, DOCR-Inspector analyzes a document image and its parsed output, identifies all errors, assigns them to one of 28 predefined types, and produces a comprehensive quality assessment. To enable this capability, we construct DOCRcase-200K for training and propose the Chain-of-Checklist reasoning paradigm to enable the hierarchical structure of parsing quality assessment. For empirical validation, we introduce DOCRcaseBench, a set of 882 real-world document parsing cases with manual annotations. On this benchmark, DOCR-Inspector-7B outperforms commercial models like Gemini 2.5 Pro, as well as leading open-source models. Further experiments demonstrate that its quality assessments provide valuable guidance for parsing results refinement, making DOCR-Inspector both a practical evaluator and a driver for advancing document parsing systems at scale. Model and code are released at: https://github.com/ZZZZZQT/DOCR-Inspector.

cs.CV

Efficient Multi-modal Large Language Models via Progressive Consistency Distillation

Visual tokens consume substantial computational resources in multi-modal large models (MLLMs), significantly compromising their efficiency. Recent works have attempted to improve efficiency by compressing visual tokens during training, either through modifications to model components or by introducing additional parameters. However, they often overlook the increased learning difficulty caused by such compression, as the model's parameter space struggles to quickly adapt to the substantial perturbations in the feature space induced by token compression. In this work, we propose to develop Efficient MLLMs via Progressive Consistency Distillation (EPIC), a progressive learning framework. Specifically, by decomposing the feature space perturbations introduced by token compression along the token-wise and layer-wise dimensions, we introduce token consistency distillation and layer consistency distillation, respectively, aiming to reduce the training difficulty by leveraging guidance from a teacher model and following a progressive learning trajectory. Extensive experiments demonstrate the superior effectiveness, robustness, and generalization capabilities of our proposed framework.

cs.CV

MinerU2.5: A Decoupled Vision-Language Model for Efficient High-Resolution Document Parsing

We introduce MinerU2.5, a 1.2B-parameter document parsing vision-language model that achieves state-of-the-art recognition accuracy while maintaining exceptional computational efficiency. Our approach employs a coarse-to-fine, two-stage parsing strategy that decouples global layout analysis from local content recognition. In the first stage, the model performs efficient layout analysis on downsampled images to identify structural elements, circumventing the computational overhead of processing high-resolution inputs. In the second stage, guided by the global layout, it performs targeted content recognition on native-resolution crops extracted from the original image, preserving fine-grained details in dense text, complex formulas, and tables. To support this strategy, we developed a comprehensive data engine that generates diverse, large-scale training corpora for both pretraining and fine-tuning. Ultimately, MinerU2.5 demonstrates strong document parsing ability, achieving state-of-the-art performance on multiple benchmarks, surpassing both general-purpose and domain-specific models across various recognition tasks, while maintaining significantly lower computational overhead.

cs.CV

Metamorphic Testing for Audio Content Moderation Software

The rapid growth of audio-centric platforms and applications such as WhatsApp and Twitter has transformed the way people communicate and share audio content in modern society. However, these platforms are increasingly misused to disseminate harmful audio content, such as hate speech, deceptive advertisements, and explicit material, which can have significant negative consequences (e.g., detrimental effects on mental health). In response, researchers and practitioners have been actively developing and deploying audio content moderation tools to tackle this issue. Despite these efforts, malicious actors can bypass moderation systems by making subtle alterations to audio content, such as modifying pitch or inserting noise. Moreover, the effectiveness of modern audio moderation tools against such adversarial inputs remains insufficiently studied. To address these challenges, we propose MTAM, a Metamorphic Testing framework for Audio content Moderation software. Specifically, we conduct a pilot study on 2000 audio clips and define 14 metamorphic relations across two perturbation categories: Audio Features-Based and Heuristic perturbations. MTAM applies these metamorphic relations to toxic audio content to generate test cases that remain harmful while being more likely to evade detection. In our evaluation, we employ MTAM to test five commercial textual content moderation software and an academic model against three kinds of toxic content. The results show that MTAM achieves up to 38.6%, 18.3%, 35.1%, 16.7%, and 51.1% error finding rates (EFR) when testing commercial moderation software provided by Gladia, Assembly AI, Baidu, Nextdata, and Tencent, respectively, and it obtains up to 45.7% EFR when testing the state-of-the-art algorithms from the academy.

cs.SE

OCR Hinders RAG: Evaluating the Cascading Impact of OCR on Retrieval-Augmented Generation

Retrieval-augmented Generation (RAG) enhances Large Language Models (LLMs) by integrating external knowledge to reduce hallucinations and incorporate up-to-date information without retraining. As an essential part of RAG, external knowledge bases are commonly built by extracting structured data from unstructured PDF documents using Optical Character Recognition (OCR). However, given the imperfect prediction of OCR and the inherent non-uniform representation of structured data, knowledge bases inevitably contain various OCR noises. In this paper, we introduce OHRBench, the first benchmark for understanding the cascading impact of OCR on RAG systems. OHRBench includes 8,561 carefully selected unstructured document images from seven real-world RAG application domains, along with 8,498 Q&A pairs derived from multimodal elements in documents, challenging existing OCR solutions used for RAG. To better understand OCR's impact on RAG systems, we identify two primary types of OCR noise: Semantic Noise and Formatting Noise and apply perturbation to generate a set of structured data with varying degrees of each OCR noise. Using OHRBench, we first conduct a comprehensive evaluation of current OCR solutions and reveal that none is competent for constructing high-quality knowledge bases for RAG systems. We then systematically evaluate the impact of these two noise types and demonstrate the trend relationship between the degree of OCR noise and RAG performance. Our OHRBench, including PDF documents, Q&As, and the ground truth structured data are released at: https://github.com/opendatalab/OHR-Bench

cs.CV

Stop Looking for Important Tokens in Multimodal Language Models: Duplication Matters More

Vision tokens in multimodal large language models often dominate huge computational overhead due to their excessive length compared to linguistic modality. Abundant recent methods aim to solve this problem with token pruning, which first defines an importance criterion for tokens and then prunes the unimportant vision tokens during inference. However, in this paper, we show that the importance is not an ideal indicator to decide whether a token should be pruned. Surprisingly, it usually results in inferior performance than random token pruning and leading to incompatibility to efficient attention computation operators.Instead, we propose DART (Duplication-Aware Reduction of Tokens), which prunes tokens based on its duplication with other tokens, leading to significant and training-free acceleration. Concretely, DART selects a small subset of pivot tokens and then retains the tokens with low duplication to the pivots, ensuring minimal information loss during token pruning. Experiments demonstrate that DART can prune 88.9% vision tokens while maintaining comparable performance, leading to a 1.99$\times$ and 2.99$\times$ speed-up in total time and prefilling stage, respectively, with good compatibility to efficient attention operators. Our codes are available at https://github.com/ZichenWen1/DART.

cs.CL

One-shot Federated Learning via Synthetic Distiller-Distillate Communication

One-shot Federated learning (FL) is a powerful technology facilitating collaborative training of machine learning models in a single round of communication. While its superiority lies in communication efficiency and privacy preservation compared to iterative FL, one-shot FL often compromises model performance. Prior research has primarily focused on employing data-free knowledge distillation to optimize data generators and ensemble models for better aggregating local knowledge into the server model. However, these methods typically struggle with data heterogeneity, where inconsistent local data distributions can cause teachers to provide misleading knowledge. Additionally, they may encounter scalability issues with complex datasets due to inherent two-step information loss: first, during local training (from data to model), and second, when transferring knowledge to the server model (from model to inversed data). In this paper, we propose FedSD2C, a novel and practical one-shot FL framework designed to address these challenges. FedSD2C introduces a distiller to synthesize informative distillates directly from local data to reduce information loss and proposes sharing synthetic distillates instead of inconsistent local models to tackle data heterogeneity. Our empirical results demonstrate that FedSD2C consistently outperforms other one-shot FL methods with more complex and real datasets, achieving up to 2.6 the performance of the best baseline. Code: https://github.com/Carkham/FedSD2C

cs.LG