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Justin Cheung

Publications and source records attributed to Justin Cheung.

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Transfer Learning from One Cancer to Another via Deep Learning Domain Adaptation

Supervised deep learning models often achieve excellent performance within their training distribution but struggle to generalize beyond it. In cancer histopathology, for example, a convolutional neural network (CNN) may classify cancer severity accurately for cancer types represented in its training data, yet fail on related but unseen types. Although adenocarcinomas from different organs share morphological features that might support limited cross-domain generalization, addressing domain shift directly is necessary for robust performance. Domain adaptation offers a way to transfer knowledge from labeled data in one cancer type to unlabeled data in another, helping mitigate the scarcity of annotated medical images. This work evaluates cross-domain classification performance among lung, colon, breast, and kidney adenocarcinomas. A ResNet50 trained on any single adenocarcinoma achieves over 98% accuracy on its own domain but shows minimal generalization to others. Ensembling multiple supervised models does not resolve this limitation. In contrast, converting the ResNet50 into a domain adversarial neural network (DANN) substantially improves performance on unlabeled target domains. A DANN trained on labeled breast and colon data and adapted to unlabeled lung data reaches 95.56% accuracy. We also examine the impact of stain normalization on domain adaptation. Its effects vary by target domain: for lung, accuracy drops from 95.56% to 66.60%, while for breast and colon targets, stain normalization boosts accuracy from 49.22% to 81.29% and from 78.48% to 83.36%, respectively. Finally, using Integrated Gradients reveals that DANNs consistently attribute importance to biologically meaningful regions such as densely packed nuclei, indicating that the model learns clinically relevant features and can apply them to unlabeled cancer types.

cs.CV

Improving Artifact Robustness for CT Deep Learning Models Without Labeled Artifact Images via Domain Adaptation

If a CT scanner introduces a new artifact not present in the training labels, the model may misclassify the images. Although modern CT scanners include design features which mitigate these artifacts, unanticipated or difficult-to-mitigate artifacts can still appear in practice. The direct solution of labeling images from this new distribution can be costly. As a more accessible alternative, this study evaluates domain adaptation as an approach for training models that maintain classification performance despite new artifacts, even without corresponding labels. We simulate ring artifacts from detector gain error in sinogram space and evaluate domain adversarial neural networks (DANN) against baseline and augmentation-based approaches on the OrganAMNIST abdominal CT dataset. We simulate the absence of labels from an unseen distribution via masking in the loss function and selectively detaching unlabeled instances from the computational graph. Our results demonstrate that baseline models trained only on clean images fail to generalize to images with ring artifacts, and traditional augmentation with other distortion types provides no improvement on unseen artifact domains. In contrast, the DANN approach improves classification accuracy on ring artifact images using only unlabeled artifact data during training, demonstrating the viability of domain adaptation for artifact robustness. The domain-adapted model achieved a classification accuracy of 77.4% on ring artifact test data, 38.7% higher than a baseline model only trained on images with no artifact. These findings provide empirical evidence that domain adaptation can effectively address distribution shift in medical imaging without requiring expensive expert labeling of new artifact distributions, suggesting promise for deployment in clinical settings where novel artifacts may emerge.

cs.CV