Kangyuan Zheng | Searcharxiv

arXiv2026

M-Gaussian: An Magnetic Gaussian Framework for Efficient Multi-Stack MRI Reconstruction

Magnetic Resonance Imaging (MRI) is a crucial non-invasive imaging modality. In routine clinical practice, multi-stack thick-slice acquisitions are widely used to reduce scan time and motion sensitivity, particularly in challenging scenarios such as fetal brain imaging. However, the resulting severe through-plane anisotropy compromises volumetric analysis and downstream quantitative assessment, necessitating robust reconstruction of isotropic high-resolution volumes. Implicit neural representation methods, while achieving high quality, suffer from computational inefficiency due to complex network structures. We present M-Gaussian, adapting 3D Gaussian Splatting to MRI reconstruction. Our contributions include: (1) Magnetic Gaussian primitives with physics-consistent volumetric rendering, (2) neural residual field for high-frequency detail refinement, and (3) multi-resolution progressive training. Our method achieves an optimal balance between quality and speed. On the FeTA dataset, M-Gaussian achieves 40.31 dB PSNR while being 14 times faster, representing the first successful adaptation of 3D Gaussian Splatting to multi-stack MRI reconstruction.

cs.CV↗

arXiv2026

Boosting Overlapping Organoid Instance Segmentation Using Pseudo-Label Unmixing and Synthesis-Assisted Learning

Organoids, sophisticated in vitro models of human tissues, are crucial for medical research due to their ability to simulate organ functions and assess drug responses accurately. Accurate organoid instance segmentation is critical for quantifying their dynamic behaviors, yet remains profoundly limited by high-quality annotated datasets and pervasive overlap in microscopy imaging. While semi-supervised learning (SSL) offers a solution to alleviate reliance on scarce labeled data, conventional SSL frameworks suffer from biases induced by noisy pseudo-labels, particularly in overlapping regions. Synthesis-assisted SSL (SA-SSL) has been proposed for mitigating training biases in semi-supervised semantic segmentation. We present the first adaptation of SA-SSL to organoid instance segmentation and reveal that SA-SSL struggles to disentangle intertwined organoids, often misrepresenting overlapping instances as a single entity. To overcome this, we propose Pseudo-Label Unmixing (PLU), which identifies erroneous pseudo-labels for overlapping instances and then regenerates organoid labels through instance decomposition. For image synthesis, we apply a contour-based approach to synthesize organoid instances efficiently, particularly for overlapping cases. Instance-level augmentations (IA) on pseudo-labels before image synthesis further enhances the effect of synthetic data (SD). Rigorous experiments on two organoid datasets demonstrate our method's effectiveness, achieving performance comparable to fully supervised models using only 10% labeled data, and state-of-the-art results. Ablation studies validate the contributions of PLU, contour-based synthesis, and augmentation-aware training. By addressing overlap at both pseudo-label and synthesis levels, our work advances scalable, label-efficient organoid analysis, unlocking new potential for high-throughput applications in precision medicine.

cs.CV↗