arXiv subjects

Katariina Perkonoja

Publications and source records attributed to Katariina Perkonoja.

4 recordsLinked to original sources

arXiv2026

Data anonymization in the presence of outliers via invariant coordinate selection

Protecting confidential data while preserving utility is particularly challenging when data sets contain outlying observations. Existing latent space anonymization methods, such as spectral anonymization (SA), rely on principal component analysis (PCA) and may therefore be vulnerable to contamination. We investigate anonymization in the presence of outliers and propose ICSA, a robust alternative to SA based on invariant coordinate selection (ICS). By replacing the PCA transformation with ICS, the robustness of the anonymization procedure can be regulated through the choice of scatter matrices. Alongside the methodological development, we derive a theoretical result showing that SA fails under sufficiently influential outliers. To assess the practical implications of this result, we compare the privacy-utility trade-off of ICSA and SA through simulation experiments under varying contamination settings and outlier severities. Our findings indicate that implementations of ICSA based on robust scatter matrices achieve stronger privacy protection than SA, while typically maintaining comparable, and in some cases improved, utility. We further examine the empirical performance of the proposed method using a benchmark clinical data set, where ICSA demonstrates superior overall privacy-utility efficiency relative to SA. These results suggest that explicitly accounting for outliers can materially improve anonymization performance and that robust latent space transformations offer a promising direction for privacy-preserving statistical data release.

stat.ME↗

arXiv2026

Evaluation metrics for temporal preservation in synthetic longitudinal patient data

This study introduces a set of metrics for evaluating temporal preservation in synthetic longitudinal patient data, defined as artificially generated data that mimic real patients' repeated measurements over time. The proposed metrics assess how synthetic data reproduces key temporal characteristics, categorized into marginal, covariance, individual-level and measurement structures. We show that strong marginal-level resemblance may conceal distortions in covariance and disruptions in individual-level trajectories. Temporal preservation is influenced by factors such as original data quality, measurement frequency, and preprocessing strategies, including binning, variable encoding and precision. Variables with sparse or highly irregular measurement times provide limited information for learning temporal dependencies, resulting in reduced resemblance between the synthetic and original data. No single metric adequately captures temporal preservation; instead, a multidimensional evaluation across all characteristics provides a more comprehensive assessment of synthetic data quality. Overall, the proposed metrics clarify how and why temporal structures are preserved or degraded, enabling more reliable evaluation and improvement of generative models and supporting the creation of temporally realistic synthetic longitudinal patient data.

cs.LG↗

arXiv2024

Methods for generating and evaluating synthetic longitudinal patient data: a systematic review

The rapid growth in data availability has facilitated research and development, yet not all industries have benefited equally due to legal and privacy constraints. The healthcare sector faces significant challenges in utilizing patient data because of concerns about data security and confidentiality. To address this, various privacy-preserving methods, including synthetic data generation, have been proposed. Synthetic data replicate existing data as closely as possible, acting as a proxy for sensitive information. While patient data are often longitudinal, this aspect remains underrepresented in existing reviews of synthetic data generation in healthcare. This paper maps and describes methods for generating and evaluating synthetic longitudinal patient data in real-life settings through a systematic literature review, conducted following the PRISMA guidelines and incorporating data from five databases up to May 2024. Thirty-nine methods were identified, with four addressing all challenges of longitudinal data generation, though none included privacy-preserving mechanisms. Resemblance was evaluated in most studies, utility in the majority, and privacy in just over half. Only a small fraction of studies assessed all three aspects. Our findings highlight the need for further research in this area.

stat.ME↗

arXiv2024

Asymptotic utility of spectral anonymization

In the contemporary data landscape characterized by multi-source data collection and third-party sharing, ensuring individual privacy stands as a critical concern. While various anonymization methods exist, their utility preservation and privacy guarantees remain challenging to quantify. In this work, we address this gap by studying the utility and privacy of the spectral anonymization (SA) algorithm, particularly in an asymptotic framework. Unlike conventional anonymization methods that directly modify the original data, SA operates by perturbing the data in a spectral basis and subsequently reverting them to their original basis. Alongside the original version $\mathcal{P}$-SA, employing random permutation transformation, we introduce two novel SA variants: $\mathcal{J}$-spectral anonymization and $\mathcal{O}$-spectral anonymization, which employ sign-change and orthogonal matrix transformations, respectively. We show how well, under some practical assumptions, these SA algorithms preserve the first and second moments of the original data. Our results reveal, in particular, that the asymptotic efficiency of all three SA algorithms in covariance estimation is exactly 50% when compared to the original data. To assess the applicability of these asymptotic results in practice, we conduct a simulation study with finite data and also evaluate the privacy protection offered by these algorithms using distance-based record linkage. Our research reveals that while no method exhibits clear superiority in finite-sample utility, $\mathcal{O}$-SA distinguishes itself for its exceptional privacy preservation, never producing identical records, albeit with increased computational complexity. Conversely, $\mathcal{P}$-SA emerges as a computationally efficient alternative, demonstrating unmatched efficiency in mean estimation.

cs.CR↗