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Kati Niinimäki

Publications and source records attributed to Kati Niinimäki.

5 recordsLinked to original sources

Data-driven regularization parameter selection in dynamic MRI

In dynamic MRI, sufficient time resolution can often only be obtained using imaging protocols which produce undersampled data for each image in the time series. This has led to the popularity of compressed sensing (CS) based image reconstruction approaches. One of the problems in CS approaches is determining the regularization parameters, which control the balance between data fidelity the spatial and temporal regularization terms. A data-driven approach is proposed for the total variation regularization parameter selection such that the reconstructions yield expected sparsity levels in the regularization domains. The expected sparsity levels are obtained from the measurement data for the temporal regularization and from a reference image for the spatial regularization. Two formulations are proposed. The first is a 2D search for a parameter pair which produces expected sparsity in both the temporal and spatial regularization domains. In the second approach, the sparsity-based parameter selection is split to two 1D searches using the S-curve method. The approaches are evaluated using simulated and experimental DCE-MRI. In the simulated test case, both proposed methods produce a parameter pair that is close to the RMSE optimal pair, and the reconstruction error is also close to minimum. In the experimental test case, the methods produce almost similar parameter selection, and the reconstructions are of high perceived quality. Both approaches lead to a highly feasible selection of the temporal and spatial regularization parameters in both the simulated and experimental test cases while the sequential method is computationally more efficient.

physics.med-ph↗

Parameter selection in dynamic contrast-enhanced magnetic resonance tomography

In this work we consider the image reconstruction problem of sparsely sampled dynamic contrast-enhanced (DCE) magnetic resonance imaging (MRI). DCE-MRI is a technique for acquiring a series of MR images before, during and after intravenous contrast agent administration, and it is used to study microvascular structure and perfusion. To overcome the ill-posedness of the related spatio-temporal inverse problem, we use regularization. In regularization one of the main problems is how to determine the regularization parameter which controls the balance between data fitting term and regularization term. Most methods for selecting this parameter require the computation of a large number of estimates even in stationary problems. In dynamic imaging, the parameter selection is even more time consuming since separate regularization parameters are needed for the spatial and temporal regularization functionals. In this work, we study the possibility of using the S-curve with DCE-MR data. We select the spatial regularization parameter using the S-curve, leaving the temporal regularization parameter as the only free parameter in the reconstruction problem. In this work, the temporal regularization parameter is selected manually by computing reconstructions with several values of the temporal regularization parameter.

eess.IV↗

Numerical studies of the Lagrangian approach for reconstruction of the conductivity in a waveguide

We consider an inverse problem of reconstructing the conductivity function in a hyperbolic equation using single space-time domain noisy observations of the solution on the backscattering boundary of the computational domain. We formulate our inverse problem as an optimization problem and use Lagrangian approach to minimize the corresponding Tikhonov functional. We present a theorem of a local strong convexity of our functional and derive error estimates between computed and regularized as well as exact solutions of this functional, correspondingly. In numerical simulations we apply domain decomposition finite element-finite difference method for minimization of the Lagrangian. Our computational study shows efficiency of the proposed method in the reconstruction of the conductivity function in three dimensions.

math.NA↗

Optimization approach for the simultaneous reconstruction of the dielectric permittivity and magnetic permeability functions from limited observations

We consider the inverse problem of the simultaneous reconstruction of the dielectric permittivity and magnetic permeability functions of the Maxwell's system in 3D with limited boundary observations of the electric field. The theoretical stability for the problem is provided by the Carleman estimates. For the numerical computations the problem is formulated as an optimization problem and hybrid finite element/difference method is used to solve the parameter identification problem.

math.NA↗

Multi-resolution parameter choice method for total variation regularized tomography

A computational method is introduced for choosing the regularization parameter for total variation (TV) regularization. The approach is based on computing reconstructions at a few different resolutions and various values of regularization parameter. The chosen parameter is the smallest one resulting in approximately discretization-invariant TV norms of the reconstructions. The method is tested with X-ray tomography data measured from a walnut and compared to the S-curve method. The proposed method seems to automatically adapt to the desired resolution and noise level, and it yields useful results in the tests. The results are comparable to those of the S-curve method; however, the S-curve method needs a priori information about the sparsity of the unknown, while the proposed method does not need any a priori information (apart from the choice of a desired resolution). Mathematical analysis is presented for (partial) understanding of the properties of the proposed parameter choice method. It is rigorously proven that the TV norms of the reconstructions converge with any choice of regularization parameter.

math.NA↗