arXiv subjects

Kilian Gerberding

Publications and source records attributed to Kilian Gerberding.

2 recordsLinked to original sources

arXiv2026

3Dtrees.earth: community research infrastructure for tree and forest analysis using close-range LiDAR data

From individual trees to forest stands, three-dimensional structure shapes carbon, water, and energy flows, habitat conditions, and resource availability. Yet tree and forest structural attributes remain difficult to assess consistently across space and time. Close-range LiDAR (light detection and ranging) records detailed 3D structure from branches and trees to forest plots, including trees outside forests. However, broader reuse is constrained when data, acquisition context, processing, computation, and access conditions are maintained separately. We present 3Dtrees.earth, an operational community research infrastructure that brings close-range LiDAR datasets, analysis tools, and computing resources together while linking original observations to their metadata and processing outputs. As of 23 October 2026, the platform comprised 2,760 datasets, including 2,481 publicly visible datasets. These point cloud datasets span 46 countries on all six inhabited continents and include terrestrial, mobile, and uncrewed aerial laser scanning. Users can contribute and discover datasets, run standardized processing workflows on shared computing infrastructure, inspect point clouds and model predictions in the browser, and access data and processing outputs together with citation information. Workflows combine rule-based and machine-learning methods, with tools updated as methods advance. Outputs include raster products, individual-tree and semantic segmentation, and tree- and stand-level metrics. Original point clouds and processing records are retained, enabling reprocessing with improved tools while preserving provenance. With broader coverage, curation, and validation, this shared resource could extend individual surveys into a basis for model evaluation and benchmarking, cross-site synthesis, calibration and validation of larger-scale Earth observation products, and macroecological analysis.

cs.DL↗

arXiv2026

SelectAnyTree: A Promptable Instance Segmentation Model for 3D Forest LiDAR Point Clouds

Instance segmentation of trees in forest LiDAR point clouds is constrained by label scarcity: A single hectare holds millions of points and hundreds of overlapping tree crowns, making manual annotation laborious, while automatic pre-segmentations offer no interactive refinement. Inspired by the promptable paradigm of foundation segmentation models, we propose SelectAnyTree, which delineates any individual tree in a 3D forest point cloud from a few clicks and is purpose-built for promptable instance segmentation of 3D forest LiDAR scenes. The proposed SelectAnyTree couples three lightweight stages: (1) Sparse voxel scene encoder that embeds the forest once into reusable features, (2) Click-to-query prompt encoder that turns each click into a single content query from its 3D position, positive/negative polarity, and the backbone feature of its nearest voxel, and (3) State-space query decoder that converts this query into one tree mask with linear-time complexity, with a mask feedback that conditions each refinement round on the previous mask. Each additional tree therefore costs only a lightweight prompt-encoding and decoding pass, and the full model requires just 19.4 M parameters, far fewer than prior promptable 3D models. Additionally, we exploit forest-aware information by detecting treetops as local maxima of the Canopy Height Model (CHM) computed from the scene geometry, and associating one with the user's click as a free initial click. Across seven diverse forest regions and an independent held-out dataset, SelectAnyTree segments a target tree to 79.9 Intersection-over-Union (IoU) from a single click, 24.7 points above the strongest promptable baseline, and reaches every accuracy target with the fewest clicks. The source code is available at https://github.com/thanhhff/SelectAnyTree.

cs.CV↗