arXiv subjects

Kristin A. Persson

Publications and source records attributed to Kristin A. Persson.

At least 37 records · Page 2Linked to original sources

arXiv2025

System of Agentic AI for the Discovery of Metal-Organic Frameworks

Generative models and machine learning promise accelerated material discovery in MOFs for CO2 capture and water harvesting but face significant challenges navigating vast chemical spaces while ensuring synthetizability. Here, we present MOFGen, a system of Agentic AI comprising interconnected agents: a large language model that proposes novel MOF compositions, a diffusion model that generates crystal structures, quantum mechanical agents that optimize and filter candidates, and synthetic-feasibility agents guided by expert rules and machine learning. Trained on all experimentally reported MOFs and computational databases, MOFGen generated hundreds of thousands of novel MOF structures and synthesizable organic linkers. Our methodology was validated through high-throughput experiments and the successful synthesis of five "AI-dreamt" MOFs, representing a major step toward automated synthesizable material discovery.

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arXiv2025

Towards High-Voltage Cathodes for Zinc-Ion Batteries: Discovery Pipeline and Material Design Rules

Efficient energy storage systems are crucial to address the intermittency of renewable energy sources. As multivalent batteries, Zn-ion batteries (ZIBs), while inherently low voltage, offer a promising low cost alternative to Li-ion batteries due to viable use of zinc as the anode. However, to maximize the potential impact of ZIBs, rechargable cathodes with improved Zn diffusion are needed. To better understand the chemical and structural factors influencing Zn-ion mobility within battery electrode materials, we employ a high-throughput computational screening approach to systematically evaluate candidate intercalation hosts for ZIB cathodes, expanding the chemical search space on empty intercalation hosts that do not contain Zn. We leverage a high-throughput screening funnel to identify promising cathodes in ZIBs, integrating screening criteria with DFT-based calculations of Zn$^{2+}$ intercalation and diffusion inside the host materials. Using this data, we identify the design principles that favor Zn-ion mobility in candidate cathode materials. Building on previous work on divalent ion cathodes, this study broadens the chemical space for next-generation multivalent energy storage systems.

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arXiv2025

Cross-functional transferability in universal machine learning interatomic potentials

The rapid development of universal machine learning interatomic potentials (uMLIPs) has demonstrated the possibility for generalizable learning of the universal potential energy surface. In principle, the accuracy of uMLIPs can be further improved by bridging the model from lower-fidelity datasets to high-fidelity ones. In this work, we analyze the challenge of this transfer learning problem within the CHGNet framework. We show that significant energy scale shifts and poor correlations between GGA and r$^2$SCAN pose challenges to cross-functional data transferability in uMLIPs. By benchmarking different transfer learning approaches on the MP-r$^2$SCAN dataset of 0.24 million structures, we demonstrate the importance of elemental energy referencing in the transfer learning of uMLIPs. By comparing the scaling law with and without the pre-training on a low-fidelity dataset, we show that significant data efficiency can still be achieved through transfer learning, even with a target dataset of sub-million structures. We highlight the importance of proper transfer learning and multi-fidelity learning in creating next-generation uMLIPs on high-fidelity data.

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arXiv2025

A Foundational Potential Energy Surface Dataset for Materials

Accurate potential energy surface (PES) descriptions are essential for atomistic simulations of materials. Universal machine learning interatomic potentials (UMLIPs)$^{1-3}$ offer a computationally efficient alternative to density functional theory (DFT)$^4$ for PES modeling across the periodic table. However, their accuracy today is fundamentally constrained due to a reliance on DFT relaxation data.$^{5,6}$ Here, we introduce MatPES, a foundational PES dataset comprising $\sim 400,000$ structures carefully sampled from 281 million molecular dynamics snapshots that span 16 billion atomic environments. We demonstrate that UMLIPs trained on the modestly sized MatPES dataset can rival, or even outperform, prior models trained on much larger datasets across a broad range of equilibrium, near-equilibrium, and molecular dynamics property benchmarks. We also introduce the first high-fidelity PES dataset based on the revised regularized strongly constrained and appropriately normed (r$^2$SCAN) functional$^7$ with greatly improved descriptions of interatomic bonding. The open source MatPES initiative emphasizes the importance of data quality over quantity in materials science and enables broad community-driven advancements toward more reliable, generalizable, and efficient UMLIPs for large-scale materials discovery and design.

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arXiv2025

Machine Learned Potential for High-Throughput Phonon Calculations of Metal-Organic Frameworks

Metal-organic frameworks (MOFs) are highly porous and versatile materials studied extensively for applications such as carbon capture and water harvesting. However, computing phonon-mediated properties in MOFs, like thermal expansion and mechanical stability, remains challenging due to the large number of atoms per unit cell, making traditional Density Functional Theory (DFT) methods impractical for high-throughput screening. Recent advances in machine learning potentials have led to foundation atomistic models, such as MACE-MP-0, that accurately predict equilibrium structures but struggle with phonon properties of MOFs. In this work, we developed a workflow for computing phonons in MOFs within the quasi-harmonic approximation with a fine-tuned MACE model, MACE-MP-MOF0. The model was trained on a curated dataset of 127 representative and diverse MOFs. The fine-tuned MACE-MP-MOF0 improves the accuracy of phonon density of states and corrects the imaginary phonon modes of MACE-MP-0, enabling high-throughput phonon calculations with state-of-the-art precision. The model successfully predicts thermal expansion and bulk moduli in agreement with DFT and experimental data for several well-known MOFs. These results highlight the potential of MACE-MP-MOF0 in guiding MOF design for applications in energy storage and thermoelectrics.

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arXiv2025

Towards MatCore: A Unified Metadata Standard for Materials Science

The materials science community seeks to support the FAIR principles for computational simulation research. The MatCore Project was recently launched to address this need, with the goal of developing an overall metadata framework and accompanying guidelines. This paper reports on the MatCore goals and overall progress. Historical background context is provided, including a review of the principles underlying successful core metadata standards. The paper also presents selected MatCore examples and discusses future plans.

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arXiv2025

Ion correlations explain kinetic selectivity in diffusion-limited solid state synthesis reactions

Establishing viable solid-state synthesis pathways for novel inorganic materials remains a major challenge in materials science. Previous pathway design methods using pair-wise reaction approaches have navigated the thermodynamic landscape with first-principles data but lack kinetic information, limiting their effectiveness. This gap leads to suboptimal precursor selection and predictions, especially for reactions forming competing phases with similar formation energies, where ion diffusion is a critical influence. Here, we demonstrate an inorganic synthesis framework by incorporating machine learning-derived transport properties through "liquid-like" product layers into a thermodynamic cellular reaction model. In the Ba-Ti-O system, known for its competitive polymorphism, we obtain accurate predictions of phase formation with varying BaO:TiO2 ratios as a function of time and temperature. We find that diffusion-thermodynamic interplay governs phase compositions, with cross-ion transport coefficients critical for predicting diffusion-limited selectivity. This work bridges length and time scales by integrating solid-state reaction kinetics with first-principles thermodynamics and spatial reactivity.

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arXiv2024

Matbench Discovery -- A framework to evaluate machine learning crystal stability predictions

The rapid adoption of machine learning (ML) in domain sciences necessitates best practices and standardized benchmarking for performance evaluation. We present Matbench Discovery, an evaluation framework for ML energy models, applied as pre-filters for high-throughput searches of stable inorganic crystals. This framework addresses the disconnect between thermodynamic stability and formation energy, as well as retrospective vs. prospective benchmarking in materials discovery. We release a Python package to support model submissions and maintain an online leaderboard, offering insights into performance trade-offs. To identify the best-performing ML methodologies for materials discovery, we benchmarked various approaches, including random forests, graph neural networks (GNNs), one-shot predictors, iterative Bayesian optimizers, and universal interatomic potentials (UIP). Our initial results rank models by test set F1 scores for thermodynamic stability prediction: EquiformerV2 + DeNS > Orb > SevenNet > MACE > CHGNet > M3GNet > ALIGNN > MEGNet > CGCNN > CGCNN+P > Wrenformer > BOWSR > Voronoi fingerprint random forest. UIPs emerge as the top performers, achieving F1 scores of 0.57-0.82 and discovery acceleration factors (DAF) of up to 6x on the first 10k stable predictions compared to random selection. We also identify a misalignment between regression metrics and task-relevant classification metrics. Accurate regressors can yield high false-positive rates near the decision boundary at 0 eV/atom above the convex hull. Our results demonstrate UIPs' ability to optimize computational budget allocation for expanding materials databases. However, their limitations remain underexplored in traditional benchmarks. We advocate for task-based evaluation frameworks, as implemented here, to address these limitations and advance ML-guided materials discovery.

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arXiv2024

Voltage Mining for (De)lithiation-stabilized Cathodes and a Machine Learning Model for Li-ion Cathode Voltage

Advances in lithium-metal anodes have inspired interest in discovery of Li-free cathodes, most of which are natively found in their charged state. This is in contrast to today's commercial lithium-ion battery cathodes, which are more stable in their discharged state. In this study, we combine calculated cathode voltage information from both categories of cathode materials, covering 5577 and 2423 total unique structure pairs, respectively. The resulting voltage distributions with respect to the redox pairs and anion types for both classes of compounds emphasize design principles for high-voltage cathodes, which favor later Period 4 transition metals in their higher oxidation states and more electronegative anions like fluorine or polyaion groups. Generally, cathodes that are found in their charged, delithiated state are shown to exhibit voltages lower than those that are most stable in their lithiated state, in agreement with thermodynamic expectations. Deviations from this trend are found to originate from different anion distributions between redox pairs. In addition, a machine learning model for voltage prediction based on chemical formulae is constructed, and shows state-of-the-art performance when compared to two established composition-based ML models for materials properties predictions, Roost and CrabNet.

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arXiv2024

ReactCA: A Cellular Automaton for Predicting Phase Evolution in Solid-State Reactions

New computational tools for solid-state synthesis recipe design are needed in order to accelerate the experimental realization of novel functional materials proposed by high-throughput materials discovery workflows. This work contributes a cellular automaton simulation framework (ReactCA) for predicting the time-dependent evolution of intermediate and product phases during solid-state reactions as a function of precursor choice and amount, reaction atmosphere, and heating profile. The simulation captures rudimentary kinetic effects, the effects of reactant particle spatial distribution, particle melting and reaction atmosphere. It achieves conservation of mass using a stochastic, asynchronous evolution rule and estimates reaction rates using density functional theory data from the Materials Project [1] and machine learning estimators for the the melting point [2] and the vibrational entropy component of the Gibbs free energy [3]. The resulting simulation framework allows for the prediction of the likely outcome of a reaction recipe before any experiments are performed. We analyze five experimental solid-state recipes for BaTiO$_3$, CaZrN$_2$ and YMnO$_3$ found in the literature to illustrate the performance of the model in capturing reaction pathways as a function of temperature, reaction selectivity and the effect of precursor choice. Our approach allows for straightforward comparison of predicted mass fractions of intermediates and products with experimental results. This simulation framework presents a step toward $\textit{in silico}$ synthesis recipe design and an easier way to optimize existing recipes, aid in the identification of intermediates and identify effective recipes for yet unrealized inorganic solids.

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arXiv2024

Realistic non-collinear ground states of solids with source-free exchange correlation functional

In this work, we extend the source-free (SF) exchange correlation (XC) functional developed by Sangeeta Sharma and co-workers to plane-wave density functional theory (DFT) based on the projector augmented wave (PAW) method. This constraint is implemented by the current authors within the VASP source code, using a fast Poisson solver that capitalizes on the parallel three-dimensional fast Fourier transforms (FFTs) implemented in VASP. Using this modified XC functional, we explore the improved convergence behavior that results from applying this constraint to the GGA-PBE+$U$+$J$ functional. In the process, we compare the non-collinear magnetic ground state computed by each functional and their SF counterpart for a select number of magnetic materials in order to provide a metric for comparing with experimentally determined magnetic orderings. We observe significantly improved agreement with experimentally measured magnetic ground state structures after applying the source-free constraint. Furthermore, we explore the importance of considering probability current densities in spin polarized systems, even under no applied field. We analyze the XC torque as well, in order to provide theoretical and computational analyses of the net XC magnetic torque induced by the source-free constraint. Along these lines, we highlight the importance of properly considering the real-space integral of the source-free local magnetic XC field. Our analysis on probability currents, net torque, and constant terms draws additional links to the rich body of previous research on spin-current density functional theory (SCDFT), and paves the way for future extensions and corrections to the SF corrected XC functional.

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arXiv2024

Overcoming systematic softening in universal machine learning interatomic potentials by fine-tuning

Machine learning interatomic potentials (MLIPs) have introduced a new paradigm for atomic simulations. Recent advancements have seen the emergence of universal MLIPs (uMLIPs) that are pre-trained on diverse materials datasets, providing opportunities for both ready-to-use universal force fields and robust foundations for downstream machine learning refinements. However, their performance in extrapolating to out-of-distribution complex atomic environments remains unclear. In this study, we highlight a consistent potential energy surface (PES) softening effect in three uMLIPs: M3GNet, CHGNet, and MACE-MP-0, which is characterized by energy and force under-prediction in a series of atomic-modeling benchmarks including surfaces, defects, solid-solution energetics, phonon vibration modes, ion migration barriers, and general high-energy states. We find that the PES softening behavior originates from a systematic underprediction error of the PES curvature, which derives from the biased sampling of near-equilibrium atomic arrangements in uMLIP pre-training datasets. We demonstrate that the PES softening issue can be effectively rectified by fine-tuning with a single additional data point. Our findings suggest that a considerable fraction of uMLIP errors are highly systematic, and can therefore be efficiently corrected. This result rationalizes the data-efficient fine-tuning performance boost commonly observed with foundational MLIPs. We argue for the importance of a comprehensive materials dataset with improved PES sampling for next-generation foundational MLIPs.

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arXiv2024

Developments and applications of the OPTIMADE API for materials discovery, design, and data exchange

The Open Databases Integration for Materials Design (OPTIMADE) application programming interface (API) empowers users with holistic access to a growing federation of databases, enhancing the accessibility and discoverability of materials and chemical data. Since the first release of the OPTIMADE specification (v1.0), the API has undergone significant development, leading to the upcoming v1.2 release, and has underpinned multiple scientific studies. In this work, we highlight the latest features of the API format, accompanying software tools, and provide an update on the implementation of OPTIMADE in contributing materials databases. We end by providing several use cases that demonstrate the utility of the OPTIMADE API in materials research that continue to drive its ongoing development.

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arXiv2024

The ab initio amorphous materials database: Empowering machine learning to decode diffusivity

Amorphous materials exhibit unique properties that make them suitable for various applications in science and technology, ranging from optical and electronic devices and solid-state batteries to protective coatings. However, data-driven exploration and design of amorphous materials is hampered by the absence of a comprehensive database covering a broad chemical space. In this work, we present the largest computed amorphous materials database to date, generated from systematic and accurate \textit{ab initio} molecular dynamics (AIMD) calculations. We also show how the database can be used in simple machine-learning models to connect properties to composition and structure, here specifically targeting ionic conductivity. These models predict the Li-ion diffusivity with speed and accuracy, offering a cost-effective alternative to expensive density functional theory (DFT) calculations. Furthermore, the process of computational quenching amorphous materials provides a unique sampling of out-of-equilibrium structures, energies, and force landscape, and we anticipate that the corresponding trajectories will inform future work in universal machine learning potentials, impacting design beyond that of non-crystalline materials.

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arXiv2024

An equivariant graph neural network for the elasticity tensors of all seven crystal systems

The elasticity tensor that describes the elastic response of a material to external forces is among the most fundamental properties of materials. The availability of full elasticity tensors for inorganic crystalline compounds, however, is limited due to experimental and computational challenges. Here, we report the materials tensor (MatTen) model for rapid and accurate estimation of the full fourth-rank elasticity tensors of crystals. Based on equivariant graph neural networks, MatTen satisfies the two essential requirements for elasticity tensors: independence of the frame of reference and preservation of material symmetry. Consequently, it provides a unified treatment of elasticity tensors for all seven crystal systems across diverse chemical spaces, without the need to deal with each separately.. MatTen was trained on a dataset of first-principles elasticity tensors garnered by the Materials Project over the past several years (we are releasing the data herein) and has broad applications in predicting the isotropic elastic properties of polycrystalline materials, examining the anisotropic behavior of single crystals, and discovering new materials with exceptional mechanical properties. Using MatTen, we have discovered a hundred new crystals with extremely large maximum directional Young's modulus and eleven polymorphs of elemental cubic metals with unconventional spatial orientation of Young's modulus.

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arXiv2023

Persistent anisotropy of the spin cycloid in BiFeO3 through ferroelectric switching

A key challenge in antiferromagnetic spintronics is the control of spin configuration on nanometer scales applicable to solid-state technologies. Bismuth ferrite (BiFeO3) is a multiferroic material that exhibits both ferroelectricity and canted antiferromagnetism at room temperature, making it a unique candidate in the development of electric-field controllable magnetic devices. The magnetic moments in BiFeO3 are arranged into a spin cycloid, resulting in unique magnetic properties which are tied to the ferroelectric order. Previous understanding of this coupling has relied on average, mesoscale measurements to infer behavior. Using nitrogen vacancy-based diamond magnetometry, we show that the spin cycloid can be deterministically controlled with an electric field. The energy landscape of the cycloid is shaped by both the ferroelectric degree of freedom and strain-induced anisotropy, restricting the magnetization changes to specific ferroelectric switching events. This study provides understanding of the antiferromagnetic texture in BiFeO3 and paves new avenues for designing magnetic textures and spintronic devices.

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arXiv2023

Mechanistically-guided materials chemistry: synthesis of new ternary nitrides, CaZrN$_2$ and CaHfN$_2$

Recent computational studies have predicted many new ternary nitrides, revealing synthetic opportunities in this underexplored phase space. However, synthesizing new ternary nitrides is difficult, in part because intermediate and product phases often have high cohesive energies that inhibit diffusion. Here, we report the synthesis of two new phases, calcium zirconium nitride (CaZrN$_2$) and calcium hafnium nitride (CaHfN$_2$), by solid state metathesis reactions between Ca$_3$N$_2$ and $M$Cl$_4$ ($M$ = Zr, Hf). Although the reaction nominally proceeds to the target phases in a 1:1 ratio of the precursors via Ca$_3$N$_2$ + $M$Cl$_4$ $\rightarrow$ Ca$M$N$_2$ + 2 CaCl$_2$, reactions prepared this way result in Ca-poor materials (Ca$_xM_{2-x}$N$_2$, $x<1$). A small excess of Ca$_3$N$_2$ (ca. 20 mol\%) is needed to yield stoichiometric Ca$M$N$_2$, as confirmed by high-resolution synchrotron powder X-ray diffraction. In situ synchrotron X-ray diffraction studies reveal that nominally stoichiometric reactions produce Zr$^{3+}$ intermediates early in the reaction pathway, and the excess Ca$_3$N$_2$ is needed to reoxidize Zr$^{3+}$ intermediates back to the Zr$^{4+}$ oxidation state of CaZrN$_2$. Analysis of computationally-derived chemical potential diagrams rationalizes this synthetic approach and its contrast from the synthesis of MgZrN$_2$. These findings additionally highlight the utility of in situ diffraction studies and computational thermochemistry to provide mechanistic guidance for synthesis.

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arXiv2023

SpinPSO: An agent-based optimization workflow for identifying global noncollinear magnetic ground-states from first-principles

We propose and implement a novel hybrid meta-heuristic optimization algorithm for the identification of non-collinear global ground-states in magnetic systems. The inputs to this optimization scheme are directly from non-collinear density functional theory (DFT), and the workflow is implemented in the atomate code framework, making it suitable to run on high-performance computing architectures. The hybrid algorithm provides a seamless theoretical extension of particle swarm optimization (PSO) algorithms to continuous $\mathcal S^2$ spins, giving it the name SpinPSO. The hybrid nature of the algorithm stems from setting the dynamics of individual spins to be governed by physically motivated atomistic spin dynamics. Using this algorithm, we are able to achieve convergence to experimentally resolved magnetic ground-states for a set of diverse test case materials that exhibit exotic spin textures.

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