arXiv subjects

Kuang Yu

Publications and source records attributed to Kuang Yu.

12 recordsLinked to original sources

arXiv2026

Lee-Yang Theory Guided Force Field Refinement Based on Phase Diagrams

We propose a general framework for automatic force field refinement guided by phase diagrams, grounded in Lee-Yang phase transition theory. The central idea is to directly use the partition function modulus as a phase-diagram-guided optimization target. Evaluating the modulus at points close to the real axis, where the Lee-Yang zeros are mostly associated with the phase transition, is more physically meaningful and avoids the numerical difficulty of explicitly solving for the zeros. This approach requires no system-specific order parameters or response properties for characterizing phase transition points, making it universal across various discontinuous phase transitions and material systems. We validate the method on refining parameters of a Lennard-Jones potential covering both gas-liquid and solid-liquid transitions, and a Cu embedded-atom method potential based on experimental melting curves. The refined force fields reproduce the target phase diagrams with significant improvement across all systems. For Cu, the refinement simultaneously improves predictions of enthalpy and heat capacity, which are observables beyond the optimization target. These results establish Lee-Yang theory as a practical tool for contemporary force field development.

cond-mat.stat-mech↗

arXiv2026

Refinement and Performance Benchmark for Range-Separated Water Force Field

In our previous work, we developed a CCSD(T)-level range-separated water force field that combines the power of physics-driven and machine learning models. However, it was found that expensive CCSD(T)/CBS calculations lead to limited number of QM data as well as the missing of force labels, both of which lead to training instability issues. Bulk properties show large variations that cannot be resolved by simply reducing the fitting error in small cluster QM dataset. Such instability in bulk phase simulation is a universal problem in the training of machine learning potentials (MLPs), and is particularly severe at CCSD(T) level of theory.In this work, using our range-separated water model as an example, we aim to overcome these limitations by developing a new training workflow. It is composed by several techniques including: 1. an active learning protocol that ensures more thorough sampling in different temperatures and densities; 2. an intermediate force label technique employing machine learning density functional; and 3. an ensemble knowledge distillation (EKD) method. These techniques significantly stabilize the resulting water model, consistently achieving sub-chemical accuracies in both cluster energies and experimental properties. Benchmarks are carried out for various properties including densities, radial distribution functions (RDFs), dielectric constants, diffusivity, and infrared spectra, all showing state-of-the-art (SOTA) performances and proving the effectiveness of the training protocol.

physics.chem-ph↗

arXiv2025

Accelerated Machine Learning Force Field for Predicting Thermal Conductivity of Organic Liquids

The thermal conductivity of organic liquids is a vital parameter influencing various industrial and environmental applications, including energy conversion, electronics cooling, and chemical processing. However, atomistic simulation of thermal conductivity of organic liquids has been hindered by the limited accuracy of classical force fields and the huge computational demand of ab initio methods. In this work, we present a machine learning force field (MLFF)-based molecular dynamics simulation workflow to predict the thermal conductivity of 20 organic liquids. Here, we introduce the concept of differential attention into the MLFF architecture for enhanced learning ability, and we use density of the liquids to align the MLFF with experiments. As a result, this workflow achieves a mean absolute percentage error of 14% for the thermal conductivity of various organic liquids, significantly lower than that of the current off-the-shelf classical force field (78%). Furthermore, the MLFF is rewritten using Triton language to maximize simulation speed, enabling rapid prediction of thermal conductivity.

physics.chem-ph↗

arXiv2025

A Hybrid Physics-Driven Neural Network Force Field for Liquid Electrolytes

Electrolyte design plays an important role in the development of lithium-ion batteries and sodium-ion batteries. Battery electrolytes feature a large design space composed of different solvents, additives, and salts, which is difficult to explore experimentally. High-fidelity molecular simulation can accurately predict the bulk properties of electrolytes by employing accurate potential energy surfaces, thus guiding the molecule and formula engineering. At present, the overly simplified classic force fields rely heavily on experimental data for fine-tuning, thus its predictive power on microscopic level is under question. In contrast, the newly emerged machine learning interatomic potential (MLIP) can accurately reproduce the ab initio data, demonstrating excellent fitting ability. However, it is still haunted by problems such as low transferrability, insufficient stability in the prediction of bulk properties, and poor training cost scaling. Therefore, it cannot yet be used as a robust and universal tool for the exploration of electrolyte design space. In this work, we introduce a highly scalable and fully bottom-up force field construction strategy called PhyNEO-Electrolyte. It adopts a hybrid physics-driven and data-driven method that relies only on monomer and dimer EDA (energy deomposition analysis) data. With a careful separation of long/short-range and non-bonding/bonding interactions, we rigorously restore the long-range asymptotic behavior, which is critical in the description of electrolyte systems. Through this approach, we significantly improve the data efficiency of MLIP training, allowing us to achieve much larger chemical space coverage using much less data while retaining reliable quantitative prediction power in bulk phase calculations. PhyNEO-electrolyte thus serves as an important tool for future electrolyte optimization.

physics.chem-ph↗

arXiv2025

Automatic Refinement of Force Fields Based on Phase Diagrams

Exact characterization of phase transitions requires sufficient configurational sampling, necessitating efficient and accurate potential energy surfaces. Molecular force fields with computational efficiency and physical interpretability are desirable but challenging to refine for complex interactions. To address this, we propose a force field refinement strategy with phase diagrams as top-down optimization targets based on automatic differentiation. Using gas-liquid co-existence as a paradigm, we employ an enhanced sampling technique and design a differentiable loss function to evaluate force fields' depiction of phase diagrams. The refined force fields produce gas-liquid phase diagrams matching well with targets for two modeling systems, which confirms our approach as an effective automated force field development framework for phase transition studies.

cond-mat.stat-mech↗

arXiv2025

Bridging Quantum Mechanics to Liquid Properties via a Universal Organic Force Field

Molecular dynamics simulations are essential tools for unraveling atomic-level insights into the structure and behavior of condensed-phase systems. However, the universal and accurate prediction of macroscopic properties based on quantum mechanical calculations remains a significant challenge, often hindered by the trade-off between computational cost and simulation accuracy. Here we present ByteFF-Pol, a polarizable force field parameterized by a graph neural network and trained exclusively on high-level quantum mechanical data. By leveraging physically-motivated force field forms and training strategies, ByteFF-Pol predicts thermodynamic and transport properties for a wide range of small-molecule liquids and electrolytes with high accuracy, surpassing current classical and machine learning force fields. This ability to make predictions without system-specific training bridges the gap between microscopic calculations and macroscopic liquid properties, enabling the exploration of previously intractable chemical spaces. This advancement enables the precise design of new electrolytes and custom-tailored solvents, establishing a robust foundation for data-driven materials discovery.

physics.comp-ph↗

arXiv2024

On the design space between molecular mechanics and machine learning force fields

A force field as accurate as quantum mechanics (QM) and as fast as molecular mechanics (MM), with which one can simulate a biomolecular system efficiently enough and meaningfully enough to get quantitative insights, is among the most ardent dreams of biophysicists -- a dream, nevertheless, not to be fulfilled any time soon. Machine learning force fields (MLFFs) represent a meaningful endeavor towards this direction, where differentiable neural functions are parametrized to fit ab initio energies, and furthermore forces through automatic differentiation. We argue that, as of now, the utility of the MLFF models is no longer bottlenecked by accuracy but primarily by their speed (as well as stability and generalizability), as many recent variants, on limited chemical spaces, have long surpassed the chemical accuracy of $1$ kcal/mol -- the empirical threshold beyond which realistic chemical predictions are possible -- though still magnitudes slower than MM. Hoping to kindle explorations and designs of faster, albeit perhaps slightly less accurate MLFFs, in this review, we focus our attention on the design space (the speed-accuracy tradeoff) between MM and ML force fields. After a brief review of the building blocks of force fields of either kind, we discuss the desired properties and challenges now faced by the force field development community, survey the efforts to make MM force fields more accurate and ML force fields faster, envision what the next generation of MLFF might look like.

physics.chem-ph↗

arXiv2024

Refining Potential Energy Surface through Dynamical Properties via Differentiable Molecular Simulation

Recently, machine learning potentials (MLP) largely enhances the reliability of molecular dynamics, but its accuracy is limited by the underlying $\textit{ab initio}$ methods. A viable approach to overcome this limitation is to refine the potential by learning from experimental data, which now can be done efficiently using modern automatic differentiation technique. However, potential refinement is mostly performed using thermodynamic properties, leaving the most accessible and informative dynamical data (like spectroscopy) unexploited. In this work, through a comprehensive application of adjoint and gradient truncation methods, we show that both memory and gradient explosion issues can be circumvented in many situations, so the dynamical property differentiation is well-behaved. Consequently, both transport coefficients and spectroscopic data can be used to improve the density functional theory based MLP towards higher accuracy. Essentially, this work contributes to the solution of the inverse problem of spectroscopy by extracting microscopic interactions from vibrational spectroscopic data.

physics.chem-ph↗

arXiv2024

Observation of dendrite formation at Li metal-electrolyte interface: A machine-learning enhanced constant potential framework

Uncontrollable dendrites growth during electrochemical cycles leads to low Coulombic efficiency and critical safety issues in Li metal batteries. Hence, a comprehensive understanding of the dendrite formation mechanism is essential for further enhancing the performance of Li metal batteries. Machine learning accelerated molecular dynamics (MD) simulations can provide atomic-scale resolution for various key processes at an ab-initio level accuracy. However, traditional MD simulation tools hardly capture Li electrochemical depositions, due to lack of an electrochemical constant potential (ConstP) condition. In this work, we propose a ConstP approach that combines a machine learning force field with the charge equilibration method to reveal the dynamic process of dendrites nucleation at Li metal anode surfaces. Our simulations show that inhomogeneous Li depositions, following Li aggregations in amorphous inorganic components of solid electrolyte interphases, can initiate dendrites nucleation. Our study provides microscopic insights for Li dendrites formations in Li metal anodes. More importantly, we present an efficient and accurate simulation method for modeling realistic ConstP conditions, which holds considerable potential for broader applications in modeling complex electrochemical interfaces.

cond-mat.mtrl-sci↗

arXiv2023

Proton Collective Quantum Tunneling Induces Anomalous Thermal Conductivity of Ice under Pressure

Proton tunneling is believed to be non-local in ice but has never been shown experimentally. Here we measured thermal conductivity of ice under pressure up to 50 GPa and found it to increase with pressure until 20 GPa but decrease at higher pressures. We attribute this anomalous drop of thermal conductivity to the collective tunneling of protons at high pressures, supported by large-scale quantum molecular dynamics simulations. The collective tunneling loops span several picoseconds in time and are as large as nanometers in space, which match the phonon periods and wavelengths, leading to strong phonon scattering at high pressures. Our results show direct evidence of collective quantum motion existing in high-pressure ice and provide a new perspective to understanding the coupling between phonon propagation and atomic tunneling.

physics.chem-ph↗

arXiv2023

Multi-configurational nature of electron correlation within nitrogen vacancy centers in diamond

Diamond is a solid-state platform to develop quantum technologies, but it has been a long-standing problem that the current understanding of quantum states in diamond is mostly limited to single-electron pictures. Here, we combine the full configuration interaction quantum Monte Carlo method and the density-matrix functional embedding theory, to achieve unprecedented accuracy in describing the many-body quantum states of nitrogen vacancy (NV) centers in diamond. More than 30 electrons and 130 molecular orbitals are correlated, which reveals the multi-configurational wavefunction of the many-body quantum states in diamond. The multi-configurational description explains puzzling experimental measurements in intersystem crossing and charge state transition in NV centers in diamond. The calculations not only reproduce the available experimental measurements of the energy gaps between quantum states but also provide new benchmarks for states that are still subject to considerable uncertainty. This study highlights the importance of multi-configurational wavefunction in the many-body quantum states in solids.

physics.chem-ph↗

arXiv2021

An Extendible, Graph-Neural-Network-Based Approach for Accurate Force Field Development of Large Flexible Organic Molecules

An accurate force field is the key to the success of all molecular mechanics simulations on organic polymers and biomolecules. Accuracy beyond density functional theory is often needed to describe the intermolecular interactions, while most correlated wavefunction (CW) methods are prohibitively expensive for large molecules. Therefore, it posts a great challenge to develop an extendible ab initio force field for large flexible organic molecules at CW level of accuracy. In this work, we face this challenge by combining the physics-driven nonbonding potential with a data-driven subgraph neural network bonding model (named sGNN). Tests on polyethylene glycol polymer chains show that our strategy is highly accurate and robust for molecules of different sizes. Therefore, we can develop the force field from small molecular fragments (with sizes easily accessible to CW methods) and safely transfer it to large polymers, thus opening a new path to the next-generation organic force fields.

physics.chem-ph↗