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Kuanquan Wang

Publications and source records attributed to Kuanquan Wang.

At least 19 recordsLinked to original sources

KANResDiff: Learning Local Residual Diffusion via Kolmogorov-Arnold Network for Ambiguous Medical Image Segmentation

Ambiguous medical image segmentation aims to provide a series of diverse but plausible segmentation hypotheses. However, existing methods introduce stochasticity in a fixed and pre-defined manner, failing to form a progressive semantic modeling process. To address these challenges, we propose KANResDiff to learn local residual diffusion with Kolmogorov-Arnold Network, thereby assigning distinct roles across stages for ambiguity modeling. Specifically, we propose Independent Time Encoding that offers spline-based time embeddings instead of linear ones from MLPs, which enhances the independence across inference stages and assigns progressive semantic roles to different stages. We propose Residual Schrodinger Bridge that injects deterministic residual prior with learnable weights by constructing local Schrodinger Bridge instead of following manually settings, achieving a flexible deterministic-stochastic interaction and stage-aware ambiguity modeling thanks to local optimal diffusion path. Extensive experimental results on two public datasets demonstrate that KANResDiff achieves SOTA performance on GED and HM-IoU, with maximum improvements of 16.8% and 7.7%, respectively, while maintaining competitive performance on the MDM metric. Source code is available at https://github.com/PerceptionComputingLab/KANResDiff.

cs.CV

PCA-Enhanced Probabilistic U-Net for Effective Ambiguous Medical Image Segmentation

Ambiguous Medical Image Segmentation (AMIS) is significant to address the challenges of inherent uncertainties from image ambiguities, noise, and subjective annotations. Existing conditional variational autoencoder (cVAE)-based methods effectively capture uncertainty but face limitations including redundancy in high-dimensional latent spaces and limited expressiveness of single posterior networks. To overcome these issues, we introduce a novel PCA-Enhanced Probabilistic U-Net (PEP U-Net). Our method effectively incorporates Principal Component Analysis (PCA) for dimensionality reduction in the posterior network to mitigate redundancy and improve computational efficiency. Additionally, we further employ an inverse PCA operation to reconstruct critical information, enhancing the latent space's representational capacity. Compared to conventional generative models, our method preserves the ability to generate diverse segmentation hypotheses while achieving a superior balance between segmentation accuracy and predictive variability, thereby advancing the performance of generative modeling in medical image segmentation.

cs.CV

Elucidating the Design Space of Arbitrary-Noise-Based Diffusion Models

Although EDM aims to unify the design space of diffusion models, its reliance on fixed Gaussian noise prevents it from explaining emerging flow-based methods that diffuse arbitrary noise. Moreover, our study reveals that EDM's forcible injection of Gaussian noise has adverse effects on image restoration task, as it corrupts the degraded images, overextends the restoration distance, and increases the task's complexity. To interpret diverse methods for handling distinct noise patterns within a unified theoretical framework and to minimize the restoration distance, we propose EDA, which Elucidates the Design space of Arbitrary-noise diffusion models. Theoretically, EDA expands noise pattern flexibility while preserving EDM's modularity, with rigorous proof that increased noise complexity introduces no additional computational overhead during restoration. EDA is validated on three representative medical image denoising and natural image restoration tasks: MRI bias field correction (global smooth noise), CT metal artifact removal (global sharp noise) and natural image shadow removal (local boundary-aware noise). With only 5 sampling steps, competitive results against specialized methods across medical and natural tasks demonstrate EDA's strong generalization capability for image restoration. Code is available at: https://github.com/PerceptionComputingLab/EDA.

cs.CV

Fully Kolmogorov-Arnold Deep Model in Medical Image Segmentation

Deeply stacked KANs are practically impossible due to high training difficulties and substantial memory requirements. Consequently, existing studies can only incorporate few KAN layers, hindering the comprehensive exploration of KANs. This study overcomes these limitations and introduces the first fully KA-based deep model, demonstrating that KA-based layers can entirely replace traditional architectures in deep learning and achieve superior learning capacity. Specifically, (1) the proposed Share-activation KAN (SaKAN) reformulates Sprecher's variant of Kolmogorov-Arnold representation theorem, which achieves better optimization due to its simplified parameterization and denser training samples, to ease training difficulty, (2) this paper indicates that spline gradients contribute negligibly to training while consuming huge GPU memory, thus proposes the Grad-Free Spline to significantly reduce memory usage and computational overhead. (3) Building on these two innovations, our ALL U-KAN is the first representative implementation of fully KA-based deep model, where the proposed KA and KAonv layers completely replace FC and Conv layers. Extensive evaluations on three medical image segmentation tasks confirm the superiority of the full KA-based architecture compared to partial KA-based and traditional architectures, achieving all higher segmentation accuracy. Compared to directly deeply stacked KAN, ALL U-KAN achieves 10 times reduction in parameter count and reduces memory consumption by more than 20 times, unlocking the new explorations into deep KAN architectures.

cs.CV

Ambiguity-aware Truncated Flow Matching for Ambiguous Medical Image Segmentation

A simultaneous enhancement of accuracy and diversity of predictions remains a challenge in ambiguous medical image segmentation (AMIS) due to the inherent trade-offs. While truncated diffusion probabilistic models (TDPMs) hold strong potential with a paradigm optimization, existing TDPMs suffer from entangled accuracy and diversity of predictions with insufficient fidelity and plausibility. To address the aforementioned challenges, we propose Ambiguity-aware Truncated Flow Matching (ATFM), which introduces a novel inference paradigm and dedicated model components. Firstly, we propose Data-Hierarchical Inference, a redefinition of AMIS-specific inference paradigm, which enhances accuracy and diversity at data-distribution and data-sample level, respectively, for an effective disentanglement. Secondly, Gaussian Truncation Representation (GTR) is introduced to enhance both fidelity of predictions and reliability of truncation distribution, by explicitly modeling it as a Gaussian distribution at $T_{\text{trunc}}$ instead of using sampling-based approximations. Thirdly, Segmentation Flow Matching (SFM) is proposed to enhance the plausibility of diverse predictions by extending semantic-aware flow transformation in Flow Matching (FM). Comprehensive evaluations on LIDC and ISIC3 datasets demonstrate that ATFM outperforms SOTA methods and simultaneously achieves a more efficient inference. ATFM improves GED and HM-IoU by up to $12\%$ and $7.3\%$ compared to advanced methods.

cs.CV

Structure and Smoothness Constrained Dual Networks for MR Bias Field Correction

MR imaging techniques are of great benefit to disease diagnosis. However, due to the limitation of MR devices, significant intensity inhomogeneity often exists in imaging results, which impedes both qualitative and quantitative medical analysis. Recently, several unsupervised deep learning-based models have been proposed for MR image improvement. However, these models merely concentrate on global appearance learning, and neglect constraints from image structures and smoothness of bias field, leading to distorted corrected results. In this paper, novel structure and smoothness constrained dual networks, named S2DNets, are proposed aiming to self-supervised bias field correction. S2DNets introduce piece-wise structural constraints and smoothness of bias field for network training to effectively remove non-uniform intensity and retain much more structural details. Extensive experiments executed on both clinical and simulated MR datasets show that the proposed model outperforms other conventional and deep learning-based models. In addition to comparison on visual metrics, downstream MR image segmentation tasks are also used to evaluate the impact of the proposed model. The source code is available at: https://github.com/LeongDong/S2DNets}{https://github.com/LeongDong/S2DNets.

eess.IV

Finding Local Diffusion Schrödinger Bridge using Kolmogorov-Arnold Network

In image generation, Schrödinger Bridge (SB)-based methods theoretically enhance the efficiency and quality compared to the diffusion models by finding the least costly path between two distributions. However, they are computationally expensive and time-consuming when applied to complex image data. The reason is that they focus on fitting globally optimal paths in high-dimensional spaces, directly generating images as next step on the path using complex networks through self-supervised training, which typically results in a gap with the global optimum. Meanwhile, most diffusion models are in the same path subspace generated by weights $f_A(t)$ and $f_B(t)$, as they follow the paradigm ($x_t = f_A(t)x_{Img} + f_B(t)ε$). To address the limitations of SB-based methods, this paper proposes for the first time to find local Diffusion Schrödinger Bridges (LDSB) in the diffusion path subspace, which strengthens the connection between the SB problem and diffusion models. Specifically, our method optimizes the diffusion paths using Kolmogorov-Arnold Network (KAN), which has the advantage of resistance to forgetting and continuous output. The experiment shows that our LDSB significantly improves the quality and efficiency of image generation using the same pre-trained denoising network and the KAN for optimising is only less than 0.1MB. The FID metric is reduced by more than 15\%, especially with a reduction of 48.50\% when NFE of DDIM is $5$ for the CelebA dataset. Code is available at https://github.com/PerceptionComputingLab/LDSB.

cs.CV

Tumor Detection, Segmentation and Classification Challenge on Automated 3D Breast Ultrasound: The TDSC-ABUS Challenge

Breast cancer is one of the most common causes of death among women worldwide. Early detection helps in reducing the number of deaths. Automated 3D Breast Ultrasound (ABUS) is a newer approach for breast screening, which has many advantages over handheld mammography such as safety, speed, and higher detection rate of breast cancer. Tumor detection, segmentation, and classification are key components in the analysis of medical images, especially challenging in the context of 3D ABUS due to the significant variability in tumor size and shape, unclear tumor boundaries, and a low signal-to-noise ratio. The lack of publicly accessible, well-labeled ABUS datasets further hinders the advancement of systems for breast tumor analysis. Addressing this gap, we have organized the inaugural Tumor Detection, Segmentation, and Classification Challenge on Automated 3D Breast Ultrasound 2023 (TDSC-ABUS2023). This initiative aims to spearhead research in this field and create a definitive benchmark for tasks associated with 3D ABUS image analysis. In this paper, we summarize the top-performing algorithms from the challenge and provide critical analysis for ABUS image examination. We offer the TDSC-ABUS challenge as an open-access platform at https://tdsc-abus2023.grand-challenge.org/ to benchmark and inspire future developments in algorithmic research.

eess.IV

MedFILIP: Medical Fine-grained Language-Image Pre-training

Medical vision-language pretraining (VLP) that leverages naturally-paired medical image-report data is crucial for medical image analysis. However, existing methods struggle to accurately characterize associations between images and diseases, leading to inaccurate or incomplete diagnostic results. In this work, we propose MedFILIP, a fine-grained VLP model, introduces medical image-specific knowledge through contrastive learning, specifically: 1) An information extractor based on a large language model is proposed to decouple comprehensive disease details from reports, which excels in extracting disease deals through flexible prompt engineering, thereby effectively reducing text complexity while retaining rich information at a tiny cost. 2) A knowledge injector is proposed to construct relationships between categories and visual attributes, which help the model to make judgments based on image features, and fosters knowledge extrapolation to unfamiliar disease categories. 3) A semantic similarity matrix based on fine-grained annotations is proposed, providing smoother, information-richer labels, thus allowing fine-grained image-text alignment. 4) We validate MedFILIP on numerous datasets, e.g., RSNA-Pneumonia, NIH ChestX-ray14, VinBigData, and COVID-19. For single-label, multi-label, and fine-grained classification, our model achieves state-of-the-art performance, the classification accuracy has increased by a maximum of 6.69\%. The code is available in https://github.com/PerceptionComputingLab/MedFILIP.

cs.CV

Learning Spatially Decoupled Color Representations for Facial Image Colorization

Image colorization methods have shown prominent performance on natural images. However, since humans are more sensitive to faces, existing methods are insufficient to meet the demands when applied to facial images, typically showing unnatural and uneven colorization results. In this paper, we investigate the facial image colorization task and find that the problems with facial images can be attributed to an insufficient understanding of facial components. As a remedy, by introducing facial component priors, we present a novel facial image colorization framework dubbed FCNet. Specifically, we learn a decoupled color representation for each face component (e.g., lips, skin, eyes, and hair) under the guidance of face parsing maps. A chromatic and spatial augmentation strategy is presented to facilitate the learning procedure, which requires only grayscale and color facial image pairs. After training, the presented FCNet can be naturally applied to facial image colorization with single or multiple reference images. To expand the application paradigms to scenarios with no reference images, we further train two alternative modules, which predict the color representations from the grayscale input or a random seed, respectively. Extensive experiments show that our method can perform favorably against existing methods in various application scenarios (i.e., no-, single-, and multi-reference facial image colorization). The source code and pre-trained models will be publicly available.

cs.CV

Efficient automatic segmentation for multi-level pulmonary arteries: The PARSE challenge

Efficient automatic segmentation of multi-level (i.e. main and branch) pulmonary arteries (PA) in CTPA images plays a significant role in clinical applications. However, most existing methods concentrate only on main PA or branch PA segmentation separately and ignore segmentation efficiency. Besides, there is no public large-scale dataset focused on PA segmentation, which makes it highly challenging to compare the different methods. To benchmark multi-level PA segmentation algorithms, we organized the first \textbf{P}ulmonary \textbf{AR}tery \textbf{SE}gmentation (PARSE) challenge. On the one hand, we focus on both the main PA and the branch PA segmentation. On the other hand, for better clinical application, we assign the same score weight to segmentation efficiency (mainly running time and GPU memory consumption during inference) while ensuring PA segmentation accuracy. We present a summary of the top algorithms and offer some suggestions for efficient and accurate multi-level PA automatic segmentation. We provide the PARSE challenge as open-access for the community to benchmark future algorithm developments at \url{https://parse2022.grand-challenge.org/Parse2022/}.

eess.IV

Unsupervised Decomposition Networks for Bias Field Correction in MR Image

Bias field, which is caused by imperfect MR devices or imaged objects, introduces intensity inhomogeneity into MR images and degrades the performance of MR image analysis methods. Many retrospective algorithms were developed to facilitate the bias correction, to which the deep learning-based methods outperformed. However, in the training phase, the supervised deep learning-based methods heavily rely on the synthesized bias field. As the formation of the bias field is extremely complex, it is difficult to mimic the true physical property of MR images by synthesized data. While bias field correction and image segmentation are strongly related, the segmentation map is precisely obtained by decoupling the bias field from the original MR image, and the bias value is indicated by the segmentation map in reverse. Thus, we proposed novel unsupervised decomposition networks that are trained only with biased data to obtain the bias-free MR images. Networks are made up of: a segmentation part to predict the probability of every pixel belonging to each class, and an estimation part to calculate the bias field, which are optimized alternately. Furthermore, loss functions based on the combination of fuzzy clustering and the multiplicative bias field are also devised. The proposed loss functions introduce the smoothness of bias field and construct the soft relationships among different classes under intra-consistency constraints. Extensive experiments demonstrate that the proposed method can accurately estimate bias fields and produce better bias correction results. The code is available on the link: https://github.com/LeongDong/Bias-Decomposition-Networks.

eess.IV

The state-of-the-art 3D anisotropic intracranial hemorrhage segmentation on non-contrast head CT: The INSTANCE challenge

Automatic intracranial hemorrhage segmentation in 3D non-contrast head CT (NCCT) scans is significant in clinical practice. Existing hemorrhage segmentation methods usually ignores the anisotropic nature of the NCCT, and are evaluated on different in-house datasets with distinct metrics, making it highly challenging to improve segmentation performance and perform objective comparisons among different methods. The INSTANCE 2022 was a grand challenge held in conjunction with the 2022 International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI). It is intended to resolve the above-mentioned problems and promote the development of both intracranial hemorrhage segmentation and anisotropic data processing. The INSTANCE released a training set of 100 cases with ground-truth and a validation set with 30 cases without ground-truth labels that were available to the participants. A held-out testing set with 70 cases is utilized for the final evaluation and ranking. The methods from different participants are ranked based on four metrics, including Dice Similarity Coefficient (DSC), Hausdorff Distance (HD), Relative Volume Difference (RVD) and Normalized Surface Dice (NSD). A total of 13 teams submitted distinct solutions to resolve the challenges, making several baseline models, pre-processing strategies and anisotropic data processing techniques available to future researchers. The winner method achieved an average DSC of 0.6925, demonstrating a significant growth over our proposed baseline method. To the best of our knowledge, the proposed INSTANCE challenge releases the first intracranial hemorrhage segmentation benchmark, and is also the first challenge that intended to resolve the anisotropic problem in 3D medical image segmentation, which provides new alternatives in these research fields.

eess.IV

Position-prior Clustering-based Self-attention Module for Knee Cartilage Segmentation

The morphological changes in knee cartilage (especially femoral and tibial cartilages) are closely related to the progression of knee osteoarthritis, which is expressed by magnetic resonance (MR) images and assessed on the cartilage segmentation results. Thus, it is necessary to propose an effective automatic cartilage segmentation model for longitudinal research on osteoarthritis. In this research, to relieve the problem of inaccurate discontinuous segmentation caused by the limited receptive field in convolutional neural networks, we proposed a novel position-prior clustering-based self-attention module (PCAM). In PCAM, long-range dependency between each class center and feature point is captured by self-attention allowing contextual information re-allocated to strengthen the relative features and ensure the continuity of segmentation result. The clutsering-based method is used to estimate class centers, which fosters intra-class consistency and further improves the accuracy of segmentation results. The position-prior excludes the false positives from side-output and makes center estimation more precise. Sufficient experiments are conducted on OAI-ZIB dataset. The experimental results show that the segmentation performance of combination of segmentation network and PCAM obtains an evident improvement compared to original model, which proves the potential application of PCAM in medical segmentation tasks. The source code is publicly available from link: https://github.com/LeongDong/PCAMNet

eess.IV

ULTRA: Uncertainty-aware Label Distribution Learning for Breast Tumor Cellularity Assessment

Neoadjuvant therapy (NAT) for breast cancer is a common treatment option in clinical practice. Tumor cellularity (TC), which represents the percentage of invasive tumors in the tumor bed, has been widely used to quantify the response of breast cancer to NAT. Therefore, automatic TC estimation is significant in clinical practice. However, existing state-of-the-art methods usually take it as a TC score regression problem, which ignores the ambiguity of TC labels caused by subjective assessment or multiple raters. In this paper, to efficiently leverage the label ambiguities, we proposed an Uncertainty-aware Label disTRibution leArning (ULTRA) framework for automatic TC estimation. The proposed ULTRA first converted the single-value TC labels to discrete label distributions, which effectively models the ambiguity among all possible TC labels. Furthermore, the network learned TC label distributions by minimizing the Kullback-Leibler (KL) divergence between the predicted and ground-truth TC label distributions, which better supervised the model to leverage the ambiguity of TC labels. Moreover, the ULTRA mimicked the multi-rater fusion process in clinical practice with a multi-branch feature fusion module to further explore the uncertainties of TC labels. We evaluated the ULTRA on the public BreastPathQ dataset. The experimental results demonstrate that the ULTRA outperformed the regression-based methods for a large margin and achieved state-of-the-art results. The code will be available from https://github.com/PerceptionComputingLab/ULTRA

eess.IV

Transformer Network for Significant Stenosis Detection in CCTA of Coronary Arteries

Coronary artery disease (CAD) has posed a leading threat to the lives of cardiovascular disease patients worldwide for a long time. Therefore, automated diagnosis of CAD has indispensable significance in clinical medicine. However, the complexity of coronary artery plaques that cause CAD makes the automatic detection of coronary artery stenosis in Coronary CT angiography (CCTA) a difficult task. In this paper, we propose a Transformer network (TR-Net) for the automatic detection of significant stenosis (i.e. luminal narrowing > 50%) while practically completing the computer-assisted diagnosis of CAD. The proposed TR-Net introduces a novel Transformer, and tightly combines convolutional layers and Transformer encoders, allowing their advantages to be demonstrated in the task. By analyzing semantic information sequences, TR-Net can fully understand the relationship between image information in each position of a multiplanar reformatted (MPR) image, and accurately detect significant stenosis based on both local and global information. We evaluate our TR-Net on a dataset of 76 patients from different patients annotated by experienced radiologists. Experimental results illustrate that our TR-Net has achieved better results in ACC (0.92), Spec (0.96), PPV (0.84), F1 (0.79) and MCC (0.74) indicators compared with the state-of-the-art methods. The source code is publicly available from the link (https://github.com/XinghuaMa/TR-Net).

eess.IV

The SARAS Endoscopic Surgeon Action Detection (ESAD) dataset: Challenges and methods

For an autonomous robotic system, monitoring surgeon actions and assisting the main surgeon during a procedure can be very challenging. The challenges come from the peculiar structure of the surgical scene, the greater similarity in appearance of actions performed via tools in a cavity compared to, say, human actions in unconstrained environments, as well as from the motion of the endoscopic camera. This paper presents ESAD, the first large-scale dataset designed to tackle the problem of surgeon action detection in endoscopic minimally invasive surgery. ESAD aims at contributing to increase the effectiveness and reliability of surgical assistant robots by realistically testing their awareness of the actions performed by a surgeon. The dataset provides bounding box annotation for 21 action classes on real endoscopic video frames captured during prostatectomy, and was used as the basis of a recent MIDL 2020 challenge. We also present an analysis of the dataset conducted using the baseline model which was released as part of the challenge, and a description of the top performing models submitted to the challenge together with the results they obtained. This study provides significant insight into what approaches can be effective and can be extended further. We believe that ESAD will serve in the future as a useful benchmark for all researchers active in surgeon action detection and assistive robotics at large.

cs.CV

Weakly Supervised Arrhythmia Detection Based on Deep Convolutional Neural Network

Supervised deep learning has been widely used in the studies of automatic ECG classification, which largely benefits from sufficient annotation of large datasets. However, most of the existing large ECG datasets are roughly annotated, so the classification model trained on them can only detect the existence of abnormalities in a whole recording, but cannot determine their exact occurrence time. In addition, it may take huge time and economic cost to construct a fine-annotated ECG dataset. Therefore, this study proposes weakly supervised deep learning models for detecting abnormal ECG events and their occurrence time. The available supervision information for the models is limited to the event types in an ECG record, excluding the specific occurring time of each event. By leverage of feature locality of deep convolution neural network, the models first make predictions based on the local features, and then aggregate the local predictions to infer the existence of each event during the whole record. Through training, the local predictions are expected to reflect the specific occurring time of each event. To test their potentials, we apply the models for detecting cardiac rhythmic and morphological arrhythmias by using the AFDB and MITDB datasets, respectively. The results show that the models achieve beat-level accuracies of 99.09% in detecting atrial fibrillation, and 99.13% in detecting morphological arrhythmias, which are comparable to that of fully supervised learning models, demonstrating their effectiveness. The local prediction maps revealed by this method are also helpful to analyze and diagnose the decision logic of record-level classification models.

cs.LG