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Kui Xu

Publications and source records attributed to Kui Xu.

At least 19 recordsLinked to original sources

Trajectory Design for Fairness Enhancement in Movable Antennas-Aided Communications

Through adaptive antenna repositioning, the movable antenna (MA) technology enables on-demand reconfiguration of wireless channels, thereby creating an additional spatial degree of freedom in improving communication performance. This paper investigates a multiuser uplink communication system aided by MAs, where a base station (BS) equipped with multiple MAs serves multiple single-antenna users. Specifically, given that an optimized array geometry cannot guarantee rate fairness, we focus on designing antenna trajectory at the BS to maximize the minimum achievable rate among all users over a finite time period. The resulting optimization problem is fundamentally challenging to solve due to the continuous-time nature. To address it, we first examine an ideal case with infinitely fast MA movement and demonstrate that the relaxed problem can be optimally solved via the Lagrangian dual method. The obtained trajectory solution reveals that the BS should employ a finite set of MA deployment patterns, each allocated an optimal time duration. Building on this, we then study the general case with limited MA movement speed and propose a heuristic trajectory design inspired by the optimal patterns identified in the ideal scenario. Several insights are also gained by examining the simplified special case. Finally, numerical results are provided to validate the effectiveness of the proposed designs compared to competitive benchmarks.

cs.IT

CryoNet.Refine: A One-step Diffusion Model for Rapid Refinement of Structural Models with Cryo-EM Density Map Restraints

High-resolution structure determination by cryo-electron microscopy (cryo-EM) requires the accurate fitting of an atomic model into an experimental density map. Traditional refinement pipelines such as Phenix.real_space_refine and Rosetta are computationally expensive, demand extensive manual tuning, and present a significant bottleneck for researchers. We present CryoNet.Refine, an end-to-end deep learning framework that automates and accelerates molecular structure refinement. Our approach utilizes a one-step diffusion model that integrates a density-aware loss function with robust stereochemical restraints, enabling rapid optimization of a structure against experimental data. CryoNet.Refine provides a unified and versatile solution capable of refining protein complexes as well as DNA/RNA-protein complexes. In benchmarks against Phenix.real_space_refine, CryoNet.Refine consistently achieves substantial improvements in both model-map correlation and overall geometric quality metrics. By offering a scalable, automated, and powerful alternative, CryoNet.Refine aims to serve as an essential tool for next-generation cryo-EM structure refinement. Web server: https://cryonet.ai/refine; Source code: https://github.com/kuixu/cryonet.refine.

q-bio.BM

CryoLVM: Self-supervised Learning from Cryo-EM Density Maps with Large Vision Models

Cryo-electron microscopy (cryo-EM) has revolutionized structural biology by enabling near-atomic-level visualization of biomolecular assemblies. However, the exponential growth in cryo-EM data throughput and complexity, coupled with diverse downstream analytical tasks, necessitates unified computational frameworks that transcend current task-specific deep learning approaches with limited scalability and generalizability. We present CryoLVM, a foundation model that learns rich structural representations from experimental density maps with resolved structures by leveraging the Joint-Embedding Predictive Architecture (JEPA) integrated with SCUNet-based backbone, which can be rapidly adapted to various downstream tasks. We further introduce a novel histogram-based distribution alignment loss that accelerates convergence and enhances fine-tuning performance. We demonstrate CryoLVM's effectiveness across three critical cryo-EM tasks: density map sharpening, density map super-resolution, and missing wedge restoration. Our method consistently outperforms state-of-the-art baselines across multiple density map quality metrics, confirming its potential as a versatile model for a wide spectrum of cryo-EM applications.

q-bio.QM

Outage-Aware Sum Rate Maximization in Movable Antennas-Enabled Systems

In this paper, we investigate the movable antennas (MAs)-enabled multiple-input-single-output (MISO) systems, where the base station (BS) equipped with multiple MAs serves multiple single-antenna user. The delay-sensitive scenario is considered, where users refrain from periodically sending training signals to the BS for channel estimations to avoid additional latency. As a result, the BS relies solely on the statistical channel state information (CSI) to transmit data with a fixed rate. Under this setup, we aim to maximize the outage-aware sum rate of all users, by jointly optimizing antenna positions and the transmit beamforming at the BS, while satisfying the given target outage probability requirement at each user. The problem is highly non-convex, primarily because the exact cumulative distribution function (CDF) of the received signal-to-interference-plus-noise ratio (SINR) of each user is difficult to derive. To simplify analysis and without comprising performance, we adopt the statistical CSI based zero-forcing beamforming design. We then introduce one important lemma to derive the tight mean and variance of the SINR. Leveraging these results, we further exploit the Laguerre series approximation to successfully derive the closedform and tight CDF of the SINR. Subsequently, the outageaware sum rate expression is presented but still includes complex structure with respect to antenna positions. Facing this challenge, the projected gradient ascent (PGA) method is developed to iteratively update antenna positions until convergence. Numerical results demonstrate the effectiveness of our proposed schemes compared to conventional fixed-position antenna (FPA) and other competitive benchmarks.

cs.IT

Subverting Flexible Multiuser Communications via Movable Antenna-Enabled Jammer

Movable antenna (MA) is an emerging technology which can reconfigure wireless channels via adaptive antenna position adjustments at transceivers, thereby bringing additional spatial degrees of freedom for improving system performance. In this paper, from a security perspective, we exploit the MAenabled legitimate jammer (MAJ) to subvert suspicious multiuser downlink communications consisting of one suspicious transmitter (ST) and multiple suspicious receivers (SRs). Specifically, our objective is to minimize the benefit (the sum rate of all SRs or the minimum rate among all SRs) of such suspicious communications, by jointly optimizing antenna positions and the jamming beamforming at the MAJ. However, the key challenge lies in that given the MAJ's actions, the ST can reactively adjust its power allocations to instead maximize its benefit for mitigating the unfavorable interference. Such flexible behavior of the ST confuses the optimization design of the MAJ to a certain extent. Facing this difficulty, corresponding to the above two different benefits: i) we respectively determine the optimal behavior of the ST given the MAJ's actions; ii) armed with these, we arrive at two simplified problems and then develop effective alternating optimization based algorithms to iteratively solve them. In addition to these, we also focus on the special case of two SRs, and reveal insightful conclusions about the deployment rule of antenna positions at the MAJ. Furthermore, we analyze the ideal antenna deployment scheme at the MAJ for achieving the globally performance lower bound. Numerical results demonstrate the effectiveness of our proposed schemes compared to conventional fixed-position antenna (FPA) and other competitive benchmarks.

cs.IT

Two-Timescale Design for Movable Antenna Array-Enabled Multiuser Uplink Communications

Movable antenna (MA) technology can flexibly reconfigure wireless channels by adjusting antenna positions in a local region, thus owing great potential for enhancing communication performance. This letter investigates MA technology enabled multiuser uplink communications over general Rician fading channels, which consist of a base station (BS) equipped with the MA array and multiple single-antenna users. Since it is practically challenging to collect all instantaneous channel state information (CSI) by traversing all possible antenna positions at the BS, we instead propose a two-timescale scheme for maximizing the ergodic sum rate. Specifically, antenna positions at the BS are first optimized using only the statistical CSI. Subsequently, the receiving beamforming at the BS (for which we consider the three typical zero-forcing (ZF), minimum mean-square error (MMSE) and MMSE with successive interference cancellation (MMSE-SIC) receivers) is designed based on the instantaneous CSI with optimized antenna positions, thus significantly reducing practical implementation complexities. The formulated problems are highly non-convex and we develop projected gradient ascent (PGA) algorithms to effectively handle them. Simulation results illustrate that compared to conventional fixed-position antenna (FPA) array, the MA array can achieve significant performance gains by reaping an additional spatial degree of freedom.

cs.IT

Movable Antennas-Enabled Two-User Multicasting: Do We Really Need Alternating Optimization for Minimum Rate Maximization?

Movable antenna (MA) technology, which can reconfigure wireless channels by flexibly moving antenna positions in a specified region, has great potential for improving communication performance. In this paper, we consider a new setup of MAs-enabled multicasting, where we adopt a simple setting in which a linear MA array-enabled source (${\rm{S}}$) transmits a common message to two single-antenna users ${\rm{U}}_1$ and ${\rm{U}}_2$. We aim to maximize the minimum rate among these two users, by jointly optimizing the transmit beamforming and antenna positions at ${\rm{S}}$. Instead of utilizing the widely-used alternating optimization (AO) approach, we reveal, with rigorous proof, that the above two variables can be optimized separately: i) the optimal antenna positions can be firstly determined via the successive convex approximation technique, based on the rule of maximizing the correlation between ${\rm{S}}$-${\rm{U}}_1$ and ${\rm{S}}$-${\rm{U}}_2$ channels; ii) afterwards, the optimal closed-form transmit beamforming can be derived via simple arguments. Compared to AO, this new approach yields the same performance but reduces the computational complexities significantly. Moreover, it can provide insightful conclusions which are not possible with AO.

cs.IT

Movable Antennas-Assisted Secure Transmission Without Eavesdroppers' Instantaneous CSI

Movable antenna (MA) technology is highly promising for improving communication performance, due to its advantage of flexibly adjusting positions of antennas to reconfigure channel conditions. In this paper, we investigate MAs-assisted secure transmission under a legitimate transmitter Alice, a legitimate receiver Bob and multiple eavesdroppers. Specifically, we consider a practical scenario where Alice has no any knowledge about the instantaneous non-line-of-sight component of the wiretap channel. Under this setup, we evaluate the secrecy performance by adopting the secrecy outage probability metric, the tight approximation of which is first derived by interpreting the Rician fading as a special case of Nakagami fading and concurrently exploiting the Laguerre series approximation. Then, we minimize the secrecy outage probability by jointly optimizing the transmit beamforming and positions of antennas at Alice. However, the problem is highly non-convex because the objective includes the complex incomplete gamma function. To tackle this challenge, we, for the first time, effectively approximate the inverse of the incomplete gamma function as a simple linear model. Based on this approximation, we arrive at a simplified problem with a clear structure, which can be solved via the developed alternating projected gradient ascent (APGA) algorithm. Considering the high complexity of the APGA, we further design another scheme where the zero-forcing based beamforming is adopted by Alice, and then we transform the problem into minimizing a simple function which is only related to positions of antennas at Alice.As demonstrated by simulations, our proposed schemes achieve significant performance gains compared to conventional schemes based on fixed-position antennas.

cs.IT

Fluid Antennas-Enabled Multiuser Uplink: A Low-Complexity Gradient Descent for Total Transmit Power Minimization

We investigate multiuser uplink communication from multiple single-antenna users to a base station (BS), which is equipped with a movable-antenna (MA) array and adopts zero-forcing receivers to decode multiple signals. We aim to optimize the MAs' positions at the BS, to minimize the total transmit power of all users subject to the minimum rate requirement. After applying transformations, we show that the problem is equivalent to minimizing the sum of each eigenvalue's reciprocal of a matrix, which is a function of all MAs' positions. Subsequently, the projected gradient descent (PGD) method is utilized to find a locally optimal solution. In particular, different from the latest related work, we exploit the eigenvalue decomposition to successfully derive a closed-form gradient for the PGD, which facilitates the practical implementation greatly. We demonstrate by simulations that via careful optimization for all MAs' positions in our proposed design, the total transmit power of all users can be decreased significantly as compared to competitive benchmarks.

cs.IT

Movable-Antenna-Array-Enabled Communications with CoMP Reception

We consider the movable-antenna (MA) arrayenabled wireless communication with coordinate multi-point (CoMP) reception, where multiple destinations adopt the maximal ratio combination technique to jointly decode the common message sent from the transmitter equipped with the MA array. Our goal is to maximize the effective received signal-to-noise ratio, by jointly optimizing the transmit beamforming and the positions of the MA array. Although the formulated problem is highly non-convex, we reveal that it is fundamental to maximize the principal eigenvalue of a hermite channel matrix which is a function of the positions of the MA array. The corresponding sub-problem is still non-convex, for which we develop a computationally efficient algorithm. Afterwards, the optimal transmit beamforming is determined with a closed-form solution. In addition, the theoretical performance upper bound is analyzed. Since the MA array brings an additional spatial degree of freedom by flexibly adjusting all antennas' positions, it achieves significant performance gain compared to competitive benchmarks.

cs.IT

Secure Wireless Communication via Movable-Antenna Array

Movable antenna (MA) array is a novel technology recently developed where positions of transmit/receive antennas can be flexibly adjusted in the specified region to reconfigure the wireless channel and achieve a higher capacity. In this letter, we, for the first time, investigate the MA array-assisted physical-layer security where the confidential information is transmitted from a MA array-enabled Alice to a single-antenna Bob, in the presence of multiple single-antenna and colluding eavesdroppers. We aim to maximize the achievable secrecy rate by jointly designing the transmit beamforming and positions of all antennas at Alice subject to the transmit power budget and specified regions for positions of all transmit antennas. The resulting problem is highly non-convex, for which the projected gradient ascent (PGA) and the alternating optimization methods are utilized to obtain a high-quality suboptimal solution. Simulation results demonstrate that since the additional spatial degree of freedom (DoF) can be fully exploited, the MA array significantly enhances the secrecy rate compared to the conventional fixed-position antenna (FPA) array.

cs.IT

Intelligent Reflecting Surface-Aided Wireless Communication with Movable Elements

Intelligent reflecting surface (IRS) has been recognized as a powerful technology for boosting communication performance. To reduce manufacturing and control costs, it is preferable to consider discrete phase shifts (DPSs) for IRS, which are set by default as uniformly distributed in the range of $[ - \pi,\pi )$ in the literature. Such setting, however, cannot achieve a desirable performance over the general Rician fading where the channel phase concentrates in a narrow range with a higher probability. Motivated by this drawback, we in this paper design optimal non-uniform DPSs for IRS to achieve a desirable performance level. The fundamental challenge is the \textit{possible offset in phase distribution across different cascaded source-element-destination channels}, if adopting conventional IRS where the position of each element is fixed. Such phenomenon leads to different patterns of optimal non-uniform DPSs for each IRS element and thus causes huge manufacturing costs especially when the number of IRS elements is large. Driven by the recently emerging fluid antenna system (or movable antenna technology), we demonstrate that if the position of each IRS element can be flexibly adjusted, the above phase distribution offset can be surprisingly eliminated, leading to the same pattern of DPSs for each IRS element. Armed with this, we then determine the form of unified non-uniform DPSs based on a low-complexity iterative algorithm. Simulations show that our proposed design significantly improves the system performance compared to competitive benchmarks.

cs.IT

SegVoxelNet: Exploring Semantic Context and Depth-aware Features for 3D Vehicle Detection from Point Cloud

3D vehicle detection based on point cloud is a challenging task in real-world applications such as autonomous driving. Despite significant progress has been made, we observe two aspects to be further improved. First, the semantic context information in LiDAR is seldom explored in previous works, which may help identify ambiguous vehicles. Second, the distribution of point cloud on vehicles varies continuously with increasing depths, which may not be well modeled by a single model. In this work, we propose a unified model SegVoxelNet to address the above two problems. A semantic context encoder is proposed to leverage the free-of-charge semantic segmentation masks in the bird's eye view. Suspicious regions could be highlighted while noisy regions are suppressed by this module. To better deal with vehicles at different depths, a novel depth-aware head is designed to explicitly model the distribution differences and each part of the depth-aware head is made to focus on its own target detection range. Extensive experiments on the KITTI dataset show that the proposed method outperforms the state-of-the-art alternatives in both accuracy and efficiency with point cloud as input only.

cs.CV

A^2-Net: Molecular Structure Estimation from Cryo-EM Density Volumes

Constructing of molecular structural models from Cryo-Electron Microscopy (Cryo-EM) density volumes is the critical last step of structure determination by Cryo-EM technologies. Methods have evolved from manual construction by structural biologists to perform 6D translation-rotation searching, which is extremely compute-intensive. In this paper, we propose a learning-based method and formulate this problem as a vision-inspired 3D detection and pose estimation task. We develop a deep learning framework for amino acid determination in a 3D Cryo-EM density volume. We also design a sequence-guided Monte Carlo Tree Search (MCTS) to thread over the candidate amino acids to form the molecular structure. This framework achieves 91% coverage on our newly proposed dataset and takes only a few minutes for a typical structure with a thousand amino acids. Our method is hundreds of times faster and several times more accurate than existing automated solutions without any human intervention.

cs.LG

Hardware Impairments Aware Transceiver for Full-Duplex Massive MIMO Relaying

This paper studies the massive MIMO full-duplex relaying (MM-FDR), where multiple source-destination pairs communicate simultaneously with the help of a common full-duplex relay equipped with very large antenna arrays. Different from the traditional MM-FDR protocol, a general model where sources/destinations are allowed to equip with multiple antennas is considered. In contrast to the conventional MIMO system, massive MIMO must be built with low-cost components which are prone to hardware impairments. In this paper, the effect of hardware impairments is taken into consideration, and is modeled using transmit/receive distortion noises. We propose a low complexity hardware impairments aware transceiver scheme (named as HIA scheme) to mitigate the distortion noises by exploiting the statistical knowledge of channels and antenna arrays at sources and destinations. A joint degree of freedom and power optimization algorithm is presented to further optimize the spectral efficiency of HIA based MM-FDR. The results show that the HIA scheme can mitigate the "ceiling effect" appears in traditional MM-FDR protocol, if the numbers of antennas at sources and destinations can scale with that at the relay.

cs.IT

Max-SINR Receiver for HMCT Systems over Non-Stationary Doubly Dispersive Channel

In this paper, a maximizing Signal-to-Interference plus-Noise Ratio (Max-SINR) receiver for Hexagonal Multicarrier Transmission (HMCT) system over non-stationary doubly dispersive (NSDD) channel is proposed. The closed-form timing offset expression of the prototype pulse for the proposed Max-SINR HMCT receiver over NSDD channel is derived. Simulation results show that the proposed Max-SINR receiver outperforms traditional projection scheme and obtains an approximation to the theoretical upper bound SINR performance within all the local stationarity regions (LSRs). Meanwhile, the SINR performance of the proposed Max-SINR HMCT receiver is robust to the estimation error between the estimated value and the real value of root mean square (RMS) delay spread.

cs.IT

Performance Analysis of Interference-Limited Three-Phase Two-Way Relaying with Direct Channel

This paper investigates the performance of interference-limited three-phase two-way relaying with direct channel between two terminals in Rayleigh fading channels. The outage probability, sum bit error rate (BER) and ergodic sum rate are analyzed for a general model that both terminals and relay are corrupted by co-channel interference. We first derive the closed-form expressions of cumulative distribution function (CDF) for received signal-to-interference-plus-noise ratio (SINR) at the terminal. Based on the results for CDF, the lower bounds, approximate expressions as well as the asymptotic expressions for outage probability and sum BER are derived in closed-form with different computational complexities and accuracies. The approximate expression for ergodic sum rate is also presented. With the theoretic results, we consider the optimal power allocation at the relay and optimal relay location problems that aiming to minimize the outage and sum BER performances of the protocol. It is shown that jointly optimization of power and relay location can provide the best performance. Simulation results are presented to study the effect of system parameters while verify the theoretic analysis. The results show that three-phase TWR protocol can outperform two-phase TWR protocol in ergodic sum rate when the interference power at the relay is much larger than that at the terminals. This is in sharp contrast with the conclusion in interference free scenario. Moreover, we show that an estimation error on the interference channel will not affect the system performance significantly, while a very small estimation error on the desired channels can degrade the performance considerably.

cs.IT

Joint Physical Network Coding and LDPC decoding for Two Way Wireless Relaying

In this paper, we investigate the joint design of channel and network coding in bi-directional relaying systems and propose a combined low complexity physical network coding and LDPC decoding scheme. For the same LDPC codes employed at both source nodes, we show that the relay can decodes the network coded codewords from the superimposed signal received from the BPSK-modulated multiple-access channel. Simulation results shown that this novel joint physical network coding and LDPC decoding method outperforms the existing MMSE network coding and LDPC decoding method over AWGN and complex MAC channel.

cs.IT