Searcharxiv⌕ Search

arXiv subjects

Kwan-tai Leung

Publications and source records attributed to Kwan-tai Leung.

9 recordsLinked to original sources

How do incorrect ligands help detect a correct ligand?

Intrigued by the response of T cell receptors to the presence of a few agonist ligands, we propose a minimal model that can achieve similar performance. The model consists of a small cluster of immobile receptors that bind reversibly to two types (correct/incorrect) of ligands in the environment, with slightly weaker binding strength for the incorrect one. It features binding-state coupling between nearest-neighbor receptors, and receptors in the bound/free states are activated/deactivated by specific enzymes, with rates that allow kinetic proofreading. It is found that, for a range of binding-state coupling strength, incorrect ligands alone cannot activate the receptors, but the binding of merely one correct ligand to a receptor is sufficient to promote the activation of other receptors via induced binding to incorrect ligands. Both response time and signal amplification increase as the receptor binding-state coupling strength increases until it reaches an optimal range to achieve the most rapid and sensitive response. These results suggest a possible mechanism for a speedy and specific response of receptors to very few correct ligands in biological and artificial systems at the subcellular scale.

physics.bio-ph↗

Heuristic derivation of continuum kinetic equations from microscopic dynamics

We present an approximate and heuristic scheme for the derivation of continuum kinetic equations from microscopic dynamics for stochastic, interacting systems. The method consists of a mean-field type, decoupled approximation of the master equation followed by the `naive' continuum limit. The Ising model and driven diffusive systems are used as illustrations. The equations derived are in agreement with other approaches, and consequences of the microscopic dependences of coarse-grained parameters compare favorably with exact or high-temperature expansions. The method is valuable when more systematic and rigorous approaches fail, and when microscopic inputs in the continuum theory are desirable.

cond-mat.stat-mech↗

Pattern formation and selection in quasi-static fracture

Fracture in quasi-statically driven systems is studied by means of a discrete spring-block model. Developed from close comparison with desiccation experiments, it describes crack formation induced by friction on a substrate. The model produces cellular, hierarchical patterns of cracks, characterized by a mean fragment size linear in the layer thickness, in agreement with experiments. The selection of a stationary fragment size is explained by exploiting the correlations prior to cracking. A scaling behavior associated with the thickness and substrate coupling, derived and confirmed by simulations, suggests why patterns have similar morphology despite their disparity in scales.

cond-mat.stat-mech↗

Anisotropic finite-size scaling analysis of a three-dimensional driven-diffusive system

We study the standard three-dimensional driven diffusive system on a simple cubic lattice where particle jumps along a given lattice direction are biased by an infinitely strong field, while those along other directions follow the usual Kawasaki dynamics. Our goal is to determine which of the several existing theories for critical behavior is valid. We analyze finite-size scaling properties using a range of system shapes and sizes far exceeding previous studies. Four different analytic predictions are tested against the numerical data. Binder and Wang's prediction does not fit the data well. Among the two slightly different versions of Leung, the one including the effects of a dangerous irrelevant variable appears to be better. Recently proposed isotropic finite-size scaling is inconsistent with our data from cubic systems, where systematic deviations are found, especially in scaling at the critical temperature.

cond-mat.stat-mech↗

Nontrivial stochastic resonance temperature for the kinetic Ising model

The kinetic Ising model in a weak oscillating magnetic field is studied in the context of stochastic resonance. The signal-to-noise ratio calculated with simulations is found to peak at a nontrivial resonance temperature above the equilibrium critical temperature T_c. We argue that its appearance is closely related to the vanishing of the kinetic coefficient at T_c. Comparisons with various theoretical results in one and higher dimensions are made.

cond-mat.stat-mech↗

Self-organized criticality in stick-slip models with periodic boundaries

A spring-block model governed by threshold dynamics and driven by temporally increasing spring constants is investigated. Due to its novel multiplicative driving, criticality occurs even with periodic boundary conditions via a mechanism distinct from that of previous models. This mechanism is dictated by a coarsening process. The results show a high degree of universality. The observed behavior should be relevant to a class of systems approaching equilibrium via a punctuated threshold dynamics.

cond-mat.stat-mech↗

Phase transition in a spring-block model of surface fracture

A simple and robust spring-block model obeying threshold dynamics is introduced to study surface fracture of an overlayer subject to stress induced by adhesion to a substrate. We find a novel phase transition in the crack morphology and fragment-size statistics when the strain and the substrate coupling are varied. Across the transition, the cracks display in succession short-range, power-law and long-range correlations. The study of stress release prior to cracking yields useful information on the cracking process.

cond-mat↗

The Two-dimensional Nonlinear Burridge-Knopoff Model of Earthquakes

We present a two-dimensional spring-block model of earthquakes with the full nonlinear equations for the forces in terms of displacements. Correspondence of our linearized version to earlier models reveals in them inherently asymmetric elastic properties. Our model generalizes those models and allows an investigation of the effects of internal strains and vectorial forces. The former is found to be relevant to critical properties such as that described by the Gutenberg-Richter law, but the latter as well as nonlinearities up to second order in displacements are irrelevant.

cond-mat↗

Novel Phases and Finite-Size Scaling in Two-Species Asymmetric Diffusive Processes

We study a stochastic lattice gas of particles undergoing asymmetric diffusion in two dimensions. Transitions between a low-density uniform phase and high-density non-uniform phases characterized by localized or extended structure are found. We develop a mean-field theory which relates coarse-grained parameters to microscopic ones. Detailed predictions for finite-size ($L$) scaling and density profiles agree excellently with simulations. Unusual large-$L$ behavior of the transition point parallel to that of self-organized sandpile models is found.

cond-mat↗